| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is hflX [H]
Identifier: 162148045
GI number: 162148045
Start: 2318702
End: 2319988
Strand: Reverse
Name: hflX [H]
Synonym: GDI_2261
Alternate gene names: 162148045
Gene position: 2319988-2318702 (Counterclockwise)
Preceding gene: 162148046
Following gene: 162148044
Centisome position: 58.82
GC content: 69.39
Gene sequence:
>1287_bases GTGTCGCAATCCGCGACGCGGGCCGCCGTCATCCTGCCCTGGGAACGGCCGGACCGCCAGGAGGAAGTTCGGGCGGCCGA GGCCCGACTGGAAGAAGCTGTCGGCCTCGCCGCCTCGATCGGCCTGGTCATCGTGCGCCAGGCCGTGCTGGTGCTGCGGG CACGCCGGCCGTCGACATTGCTGGGAAACGGGCAGGTCGAATCGCTGCGCGCGGCGGTCCAGCAGGACCGCGTCGCCGTC GTGATCGTCGATTCGCGCCTCTCCCCCGTGCAGCAGCGCAACCTGGAACGCGCCCTGGGCTGCAAGGTCATCGACCGTAC GGCGCTGATCCTGGACATTTTCGGCGAGCGCGCGGCCACCAAGGAAGGCACGCTGCAGGTCGAACTGGCCCATCTGGAAT ATCAGCGCAGCCGCCTGGTCCGGACCTGGACCCATCTGGAGCGCCAGCGCGGCGGCTTCGGCTTCCTGGGCGGTCCGGGC GAAACCCAGATCGAGGCCGACCGCCGCATGATCGGCGACCGGATCGTGCGCCTGAAGCGGGAACTGGAACAGGTGCGGCG CACGCGCGGCCTGCACCGCGCCGCGCGCCGGCGGGTGCCGTTTCCGGTCGTGGCGCTGGTCGGTTACACCAATGCCGGAA AATCGACCCTGTTCAATGCCCTGACCGGGGCGACCGTCTTCGCCCAGGACCAGTTGTTCGCCACCCTCGACCCGACGATG CGCGGCATTCGCCTGCCGTCGGGCCGGCGCATCATCCTGTCCGACACGGTGGGCTTCATCAGCGACCTGCCGACCGAACT GATCGCCGCCTTCCGCGCGACGCTGGAAGAGGTCGCCGAGGCCGACGTCATCCTGCATGTGCGCGATATCTCCCATCCCG ACAGCGCCGCCCAGCGCGCGGATGTCGAGGACGTGCTGGAAGGCATGGCCGGCAGCGGCACGCTGGAGGACGATTGGCGC CGGCGCGTGATCGAGGTGCAGAACAAGGCCGACCTGATCGGCGGCCGCGATGCCGTGCCGCCCCGCAAGGGCAGCGTCGT CATTTCGGCCATCACGGGCGAGGGCCTGCCCGACCTGCTGGCCGCCATCGATTCGCGCCTGACCGAGGCGATGGAAACCG TCCGCTACACCATCCCGGTGAAGGACGGCGCCATGCTGGCGTGGCTGTACGCTCATGGCGAAGTGACATCGCGCGAGGAT GGCGAGCAGGCTATCGTGGTGACGGTTCGCCTGTTGCCGGCCGACCGCGCCCGTTTCGAGATGCAGATCGCCGGTCAGGA CCAGTAG
Upstream 100 bases:
>100_bases ACGCCGGTGGTCCTGTTCGACCCGTCGCGCACCGAAGGCGCCACCGTTGACCTGACGGAGAAGGATCTGGCGGGGGATGC CGATCTCCTCTGACGATCCC
Downstream 100 bases:
>100_bases GGGTGCGGCCCGGCAGGGAGTGAAGATCATGACGGTCCCCGTTTCCGCCGGCCCTGTTTCCGTGGGACAGATGCGCGAGG TGCTGGGGATCATGCGGCTG
Product: GTP-binding protein hflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSQSATRAAVILPWERPDRQEEVRAAEARLEEAVGLAASIGLVIVRQAVLVLRARRPSTLLGNGQVESLRAAVQQDRVAV VIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGTLQVELAHLEYQRSRLVRTWTHLERQRGGFGFLGGPG ETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRAARRRVPFPVVALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTM RGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWR RRVIEVQNKADLIGGRDAVPPRKGSVVISAITGEGLPDLLAAIDSRLTEAMETVRYTIPVKDGAMLAWLYAHGEVTSRED GEQAIVVTVRLLPADRARFEMQIAGQDQ
Sequences:
>Translated_428_residues MSQSATRAAVILPWERPDRQEEVRAAEARLEEAVGLAASIGLVIVRQAVLVLRARRPSTLLGNGQVESLRAAVQQDRVAV VIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGTLQVELAHLEYQRSRLVRTWTHLERQRGGFGFLGGPG ETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRAARRRVPFPVVALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTM RGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWR RRVIEVQNKADLIGGRDAVPPRKGSVVISAITGEGLPDLLAAIDSRLTEAMETVRYTIPVKDGAMLAWLYAHGEVTSRED GEQAIVVTVRLLPADRARFEMQIAGQDQ >Mature_427_residues SQSATRAAVILPWERPDRQEEVRAAEARLEEAVGLAASIGLVIVRQAVLVLRARRPSTLLGNGQVESLRAAVQQDRVAVV IVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGTLQVELAHLEYQRSRLVRTWTHLERQRGGFGFLGGPGE TQIEADRRMIGDRIVRLKRELEQVRRTRGLHRAARRRVPFPVVALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTMR GIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWRR RVIEVQNKADLIGGRDAVPPRKGSVVISAITGEGLPDLLAAIDSRLTEAMETVRYTIPVKDGAMLAWLYAHGEVTSREDG EQAIVVTVRLLPADRARFEMQIAGQDQ
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=261, Percent_Identity=40.2298850574713, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI310133116, Length=259, Percent_Identity=40.1544401544402, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI310124269, Length=240, Percent_Identity=41.25, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI310124267, Length=240, Percent_Identity=41.25, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI310124171, Length=240, Percent_Identity=41.25, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI310124169, Length=240, Percent_Identity=41.25, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI310117731, Length=115, Percent_Identity=37.3913043478261, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1790615, Length=368, Percent_Identity=43.4782608695652, Blast_Score=265, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17561038, Length=414, Percent_Identity=33.5748792270531, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24650079, Length=380, Percent_Identity=35.2631578947368, Blast_Score=158, Evalue=8e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 47139; Mature: 47007
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSATRAAVILPWERPDRQEEVRAAEARLEEAVGLAASIGLVIVRQAVLVLRARRPSTL CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LGNGQVESLRAAVQQDRVAVVIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAAT ECCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC KEGTLQVELAHLEYQRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKR CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH ELEQVRRTRGLHRAARRRVPFPVVALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTM HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCEEEECCCEEEECCCHH RGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRA HCEECCCCCEEEEECCHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHC DVEDVLEGMAGSGTLEDDWRRRVIEVQNKADLIGGRDAVPPRKGSVVISAITGEGLPDLL CHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCHHHHH AAIDSRLTEAMETVRYTIPVKDGAMLAWLYAHGEVTSREDGEQAIVVTVRLLPADRARFE HHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEE MQIAGQDQ EEECCCCC >Mature Secondary Structure SQSATRAAVILPWERPDRQEEVRAAEARLEEAVGLAASIGLVIVRQAVLVLRARRPSTL CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LGNGQVESLRAAVQQDRVAVVIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAAT ECCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC KEGTLQVELAHLEYQRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKR CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH ELEQVRRTRGLHRAARRRVPFPVVALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTM HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCEEEECCCEEEECCCHH RGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRA HCEECCCCCEEEEECCHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHC DVEDVLEGMAGSGTLEDDWRRRVIEVQNKADLIGGRDAVPPRKGSVVISAITGEGLPDLL CHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCHHHHH AAIDSRLTEAMETVRYTIPVKDGAMLAWLYAHGEVTSREDGEQAIVVTVRLLPADRARFE HHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEE MQIAGQDQ EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]