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The map label for this gene is yiaD [C]

Identifier: 162147969

GI number: 162147969

Start: 2235788

End: 2236924

Strand: Direct

Name: yiaD [C]

Synonym: GDI_2185

Alternate gene names: 162147969

Gene position: 2235788-2236924 (Clockwise)

Preceding gene: 162147968

Following gene: 162147971

Centisome position: 56.69

GC content: 65.0

Gene sequence:

>1137_bases
ATGCGTCTCCGCACGGCATTACTCGCCACCACACTGATGGCGGCTGCACCGGTTGCTGCTAACGCAACCATCATTACCGG
CCCCTATGTCGACCTGGGTGGCGGCTACAACCTGGTCCAGAACCAGCACGGTCATTTCTCCAACGATCCCGCCAATGCTT
CGATGCTTACGAAGAGCTCGTCGCAGTATCGCCATGACGCCGGCTTCACCGGCTTCGGCGCTGTTGGCTGGGGCTTTGGT
AACGGCCTGCGTCTCGAGGCCGAGGGCCTTTACAACTATTCCGAGATCAACCACCGCGCCCCGACCGCCGCGACCGGCGT
CACCAGTGGTCACGATCAGTCGTACGGCGGCATGCTGAACGTGCTGTATGACATCGACCTGAAGCAGTTCGGGATCGACG
TCCCCGTCACGCCGTTCGTCGGTGTCGGTGCCGGCTACCTGTGGCAGAACGTCAGCCCGACCACGACCCGGTATTCGAAC
GGCAATGTCAGCCGTCTGGGCGGCACGAACGGCGGCTTCGCCTATCAGGGCATCGTCGGTGCGGCCTACGACATCCCGAA
CATGCCCGGCCTGCAGCTGACGGCGCAGTACCGCATGGTTGGCCAGGCGTTCTCGGACGGTCCATTCACCATGACCTCCT
ACACCAACGGTGTGGGCAAGAGCGTCGGCCACGCGTTCTTCGACAACCGCTTCAACCATCAGTTCATCCTGGGACTGCGC
TACGCGTTCAACACCGCGCCGCCGCCGCCGCCGCCGGCTCCGGTTGTCGTGCCGCCCGCGCCGACCCCGGCCCGCACCTA
CCTGGTGTTCTTCGACTGGGATCGTTCGGACCTGACGGCCCGCGCGCGTGAGATCGTGGCCGAAGCCGCCCAGGCCTCGA
CCCACGTCCAGACGACGCGTATCGAAGTCAACGGCTACACCGACAACTCCGCGGCCCACCCCGGCCCGCGTGGTGAGAAG
TACAACATGGGCCTGTCCATCCGTCGCGCTCAGAGCGTGAAGGCTGAACTGATCCGTGACGGCGTGCCGACCGGCGCGAT
CGACATCCACGGCTATGGCGAGCAGCATCCGCTGGTCCCGACGGGTCCGAACACCCGCGAGCCGCAGAACCGTCGCGTCG
AGATCATCCTGCACTGA

Upstream 100 bases:

>100_bases
AGCCGGAACCGGAAGATCTATAGGGGGTTAAGCATCACGCTGAGGCCGACCGTCTATGGTTTGACGGTTACTCGAACGGA
TGATCAAGAGGACGAAAATA

Downstream 100 bases:

>100_bases
TCTCCGCCGCATTACTGATGCGGTTCAAAAAGAAGAGGGATGCCTTCGGGCATCCCTTTTTTTATTCCATTCCGCCTCGT
CACGATCTGCTCTAGACGTA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: OMPC

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRLRTALLATTLMAAAPVAANATIITGPYVDLGGGYNLVQNQHGHFSNDPANASMLTKSSSQYRHDAGFTGFGAVGWGFG
NGLRLEAEGLYNYSEINHRAPTAATGVTSGHDQSYGGMLNVLYDIDLKQFGIDVPVTPFVGVGAGYLWQNVSPTTTRYSN
GNVSRLGGTNGGFAYQGIVGAAYDIPNMPGLQLTAQYRMVGQAFSDGPFTMTSYTNGVGKSVGHAFFDNRFNHQFILGLR
YAFNTAPPPPPPAPVVVPPAPTPARTYLVFFDWDRSDLTARAREIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEK
YNMGLSIRRAQSVKAELIRDGVPTGAIDIHGYGEQHPLVPTGPNTREPQNRRVEIILH

Sequences:

>Translated_378_residues
MRLRTALLATTLMAAAPVAANATIITGPYVDLGGGYNLVQNQHGHFSNDPANASMLTKSSSQYRHDAGFTGFGAVGWGFG
NGLRLEAEGLYNYSEINHRAPTAATGVTSGHDQSYGGMLNVLYDIDLKQFGIDVPVTPFVGVGAGYLWQNVSPTTTRYSN
GNVSRLGGTNGGFAYQGIVGAAYDIPNMPGLQLTAQYRMVGQAFSDGPFTMTSYTNGVGKSVGHAFFDNRFNHQFILGLR
YAFNTAPPPPPPAPVVVPPAPTPARTYLVFFDWDRSDLTARAREIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEK
YNMGLSIRRAQSVKAELIRDGVPTGAIDIHGYGEQHPLVPTGPNTREPQNRRVEIILH
>Mature_378_residues
MRLRTALLATTLMAAAPVAANATIITGPYVDLGGGYNLVQNQHGHFSNDPANASMLTKSSSQYRHDAGFTGFGAVGWGFG
NGLRLEAEGLYNYSEINHRAPTAATGVTSGHDQSYGGMLNVLYDIDLKQFGIDVPVTPFVGVGAGYLWQNVSPTTTRYSN
GNVSRLGGTNGGFAYQGIVGAAYDIPNMPGLQLTAQYRMVGQAFSDGPFTMTSYTNGVGKSVGHAFFDNRFNHQFILGLR
YAFNTAPPPPPPAPVVVPPAPTPARTYLVFFDWDRSDLTARAREIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEK
YNMGLSIRRAQSVKAELIRDGVPTGAIDIHGYGEQHPLVPTGPNTREPQNRRVEIILH

Specific function: Growth enhancer

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMPC_GLUDA (P84838)

Other databases:

- EMBL:   AM889285
- EMBL:   CP001189
- RefSeq:   YP_001602430.1
- RefSeq:   YP_002274815.1
- ProteinModelPortal:   P84838
- SMR:   P84838
- GeneID:   5790192
- GeneID:   6973798
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_0404
- HOGENOM:   HBG692109
- ProtClustDB:   CLSK2395949
- InterPro:   IPR011250
- InterPro:   IPR006665
- Gene3D:   G3DSA:2.40.160.20
- Gene3D:   G3DSA:3.30.1330.60

Pfam domain/function: PF00691 OmpA; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 40583; Mature: 40583

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS01068 OMPA_1; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRTALLATTLMAAAPVAANATIITGPYVDLGGGYNLVQNQHGHFSNDPANASMLTKSS
CCHHHHHHHHHHHHHCCCCCCCEEEECCCEECCCCEEECCCCCCCCCCCCCCCEEEECCC
SQYRHDAGFTGFGAVGWGFGNGLRLEAEGLYNYSEINHRAPTAATGVTSGHDQSYGGMLN
CCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VLYDIDLKQFGIDVPVTPFVGVGAGYLWQNVSPTTTRYSNGNVSRLGGTNGGFAYQGIVG
EEEECCHHHHCCCCCCCCHHHCCCHHHCCCCCCCEEEECCCCEEECCCCCCCEEEECEEE
AAYDIPNMPGLQLTAQYRMVGQAFSDGPFTMTSYTNGVGKSVGHAFFDNRFNHQFILGLR
EEECCCCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEE
YAFNTAPPPPPPAPVVVPPAPTPARTYLVFFDWDRSDLTARAREIVAEAAQASTHVQTTR
EEECCCCCCCCCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCEEEEEE
IEVNGYTDNSAAHPGPRGEKYNMGLSIRRAQSVKAELIRDGVPTGAIDIHGYGEQHPLVP
EEEECCCCCCCCCCCCCCCEEECCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
TGPNTREPQNRRVEIILH
CCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MRLRTALLATTLMAAAPVAANATIITGPYVDLGGGYNLVQNQHGHFSNDPANASMLTKSS
CCHHHHHHHHHHHHHCCCCCCCEEEECCCEECCCCEEECCCCCCCCCCCCCCCEEEECCC
SQYRHDAGFTGFGAVGWGFGNGLRLEAEGLYNYSEINHRAPTAATGVTSGHDQSYGGMLN
CCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VLYDIDLKQFGIDVPVTPFVGVGAGYLWQNVSPTTTRYSNGNVSRLGGTNGGFAYQGIVG
EEEECCHHHHCCCCCCCCHHHCCCHHHCCCCCCCEEEECCCCEEECCCCCCCEEEECEEE
AAYDIPNMPGLQLTAQYRMVGQAFSDGPFTMTSYTNGVGKSVGHAFFDNRFNHQFILGLR
EEECCCCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEE
YAFNTAPPPPPPAPVVVPPAPTPARTYLVFFDWDRSDLTARAREIVAEAAQASTHVQTTR
EEECCCCCCCCCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCEEEEEE
IEVNGYTDNSAAHPGPRGEKYNMGLSIRRAQSVKAELIRDGVPTGAIDIHGYGEQHPLVP
EEEECCCCCCCCCCCCCCCEEECCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
TGPNTREPQNRRVEIILH
CCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA