Click here to switch to the map view.

The map label for this gene is vanA [H]

Identifier: 162147961

GI number: 162147961

Start: 2227603

End: 2228685

Strand: Direct

Name: vanA [H]

Synonym: GDI_2177

Alternate gene names: 162147961

Gene position: 2227603-2228685 (Clockwise)

Preceding gene: 162147960

Following gene: 162147962

Centisome position: 56.48

GC content: 65.37

Gene sequence:

>1083_bases
ATGAACCAGATTTTTTCGACGGATAGCATCCCCCCGGCCGGCCTGACCCCCGAAGGAGATCTGCGGCGGGTCCGGTCCAA
TCCCGATTTCTGGTATCCCGTGGCCTGGTCGCGCGAGCTGAAGGTCGGCAAGACCATCGGCACGCGCTATGCCGGCCAGC
CGATCGCCCTGGTCCGCCCCGCCGAGGGCGAAGTCTTCGCGCTGGAAGACCGCTGCGCCCACCGCCAGGTGCCGCTGAGC
AAGGGCGTGGTGAAGGGCCAGGCGGTCCAGTGCTGTTATCACGGCTGGGCGTACGGCCGGTCCGGCCGCTGCATCGACGT
GCCGTATCTGGGCAAGGGCAAGCTGCCGAACGGTGTGCGCACCTATCCCTGCCGCGAACAGGATGGCCTGATCTTCGTCT
TCCCCGGCGACCCGGAGCGCGCCGCCGCGACACCGTTGCCCCGCCTGGCGCAGACGACCAACCCGGATTACAAGACCCGG
CGTTTCGGGCGGCACGTCAAATGCCATTACAGCTTCATGCACGAGAACCTGATGGATATGAACCATCAGTTCATGCACAT
GAAGCAGATGGGGCAGATGAAGCCTCGTTTCCTGGGACAGGATCGCGGTCCCGGCATGATCGAGGCCCGCTACACCTTCG
CGCGGACCGGCGGCAAGCAGCCGCTGGGCGAGGCGCTGGTCTTCGGCCAGAAGCGCGACAACAGCGCCAAGTACGCGCAC
CGCGACGTCATGACGATCCGCACGGAATATCCGTACCAGACCCTGAAGATCCAGGCCGAGGGCACCCCCCCGGTCATGGA
TCTGTGGATCGTCTATGTCCCGCAGGACGCCGAGGAAATGACCAACCGGGTGTTCGGCCTGCTGTCGATCAAGCGGCCCA
GGGTGCCCGGCCTGCTGGATATGGCGTGGCCGTTCCTGGTCGCATTCACCGAGCGGATCTTCAGCGAGGACCGCGAGATC
GTGGAACTGGAGCAGGCCGCGTGGGACGAACTGGGGGGCGACCATAACCAGGAAGTCTTCCCCGTCATTCGCAGCCTGCG
CGAATTGCTGGCCGAATGCGGTATCCCCGCCGCCCGATCCTGA

Upstream 100 bases:

>100_bases
AATACGGAATGATAGCCCCTTAATGCATCGTGCGGCAGGGCTGCGATCGCGTGTATGATCCGCCGGCTCCGAGCCTCAGC
GCCTGAACCCAAGAGAGACG

Downstream 100 bases:

>100_bases
AAGCATGATGCATGACGGCATGACGATCGACCTGGGAACGGATCGGACGGACGCGGCCCTGCAGGCCGGGCCCTACCGCC
TGCGCACGCTTCTGCCGTCC

Product: vanillate O-demethylase oxygenase subunit

Products: NA

Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MNQIFSTDSIPPAGLTPEGDLRRVRSNPDFWYPVAWSRELKVGKTIGTRYAGQPIALVRPAEGEVFALEDRCAHRQVPLS
KGVVKGQAVQCCYHGWAYGRSGRCIDVPYLGKGKLPNGVRTYPCREQDGLIFVFPGDPERAAATPLPRLAQTTNPDYKTR
RFGRHVKCHYSFMHENLMDMNHQFMHMKQMGQMKPRFLGQDRGPGMIEARYTFARTGGKQPLGEALVFGQKRDNSAKYAH
RDVMTIRTEYPYQTLKIQAEGTPPVMDLWIVYVPQDAEEMTNRVFGLLSIKRPRVPGLLDMAWPFLVAFTERIFSEDREI
VELEQAAWDELGGDHNQEVFPVIRSLRELLAECGIPAARS

Sequences:

>Translated_360_residues
MNQIFSTDSIPPAGLTPEGDLRRVRSNPDFWYPVAWSRELKVGKTIGTRYAGQPIALVRPAEGEVFALEDRCAHRQVPLS
KGVVKGQAVQCCYHGWAYGRSGRCIDVPYLGKGKLPNGVRTYPCREQDGLIFVFPGDPERAAATPLPRLAQTTNPDYKTR
RFGRHVKCHYSFMHENLMDMNHQFMHMKQMGQMKPRFLGQDRGPGMIEARYTFARTGGKQPLGEALVFGQKRDNSAKYAH
RDVMTIRTEYPYQTLKIQAEGTPPVMDLWIVYVPQDAEEMTNRVFGLLSIKRPRVPGLLDMAWPFLVAFTERIFSEDREI
VELEQAAWDELGGDHNQEVFPVIRSLRELLAECGIPAARS
>Mature_360_residues
MNQIFSTDSIPPAGLTPEGDLRRVRSNPDFWYPVAWSRELKVGKTIGTRYAGQPIALVRPAEGEVFALEDRCAHRQVPLS
KGVVKGQAVQCCYHGWAYGRSGRCIDVPYLGKGKLPNGVRTYPCREQDGLIFVFPGDPERAAATPLPRLAQTTNPDYKTR
RFGRHVKCHYSFMHENLMDMNHQFMHMKQMGQMKPRFLGQDRGPGMIEARYTFARTGGKQPLGEALVFGQKRDNSAKYAH
RDVMTIRTEYPYQTLKIQAEGTPPVMDLWIVYVPQDAEEMTNRVFGLLSIKRPRVPGLLDMAWPFLVAFTERIFSEDREI
VELEQAAWDELGGDHNQEVFPVIRSLRELLAECGIPAARS

Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=166, Percent_Identity=27.710843373494, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.13.82 [H]

Molecular weight: Translated: 40871; Mature: 40871

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIFSTDSIPPAGLTPEGDLRRVRSNPDFWYPVAWSRELKVGKTIGTRYAGQPIALVRP
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCCCCCEEEEEC
AEGEVFALEDRCAHRQVPLSKGVVKGQAVQCCYHGWAYGRSGRCIDVPYLGKGKLPNGVR
CCCCEEEECCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
TYPCREQDGLIFVFPGDPERAAATPLPRLAQTTNPDYKTRRFGRHVKCHYSFMHENLMDM
CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCEEEEHHHHHHHHHHH
NHQFMHMKQMGQMKPRFLGQDRGPGMIEARYTFARTGGKQPLGEALVFGQKRDNSAKYAH
HHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHEECCCCCCCCHHHH
RDVMTIRTEYPYQTLKIQAEGTPPVMDLWIVYVPQDAEEMTNRVFGLLSIKRPRVPGLLD
CCEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHEECCCCCCCHHH
MAWPFLVAFTERIFSEDREIVELEQAAWDELGGDHNQEVFPVIRSLRELLAECGIPAARS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQIFSTDSIPPAGLTPEGDLRRVRSNPDFWYPVAWSRELKVGKTIGTRYAGQPIALVRP
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCCCCCEEEEEC
AEGEVFALEDRCAHRQVPLSKGVVKGQAVQCCYHGWAYGRSGRCIDVPYLGKGKLPNGVR
CCCCEEEECCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
TYPCREQDGLIFVFPGDPERAAATPLPRLAQTTNPDYKTRRFGRHVKCHYSFMHENLMDM
CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCEEEEHHHHHHHHHHH
NHQFMHMKQMGQMKPRFLGQDRGPGMIEARYTFARTGGKQPLGEALVFGQKRDNSAKYAH
HHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHEECCCCCCCCHHHH
RDVMTIRTEYPYQTLKIQAEGTPPVMDLWIVYVPQDAEEMTNRVFGLLSIKRPRVPGLLD
CCEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHEECCCCCCCHHH
MAWPFLVAFTERIFSEDREIVELEQAAWDELGGDHNQEVFPVIRSLRELLAECGIPAARS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9098058 [H]