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The map label for this gene is yhbH [C]

Identifier: 162147904

GI number: 162147904

Start: 2175231

End: 2175818

Strand: Direct

Name: yhbH [C]

Synonym: GDI_2120

Alternate gene names: 162147904

Gene position: 2175231-2175818 (Clockwise)

Preceding gene: 162147903

Following gene: 162147907

Centisome position: 55.15

GC content: 65.82

Gene sequence:

>588_bases
ATGCAGATCAGTGTCGCTGGCAAGCAGATCGACCTCTCCGACGCTTTGAAGCACCGGGTTACGGCCCATCTCGATCGTCT
TGCCGACAAATTCTTCGACCGTGCCCTGGATGCGCAGGTCACCTTCAGCCGCGCCCGATCCTTCTTTACCTGCGATATCA
ACCTTCATGCCGCGCGGGGCCTGACCCTGCGGGGTGAAGGCGAGGCCGCCGATGCCCATGGCGCCTTCGACGACGCGGCC
GAACATATCGCCCGTCGCCTGCGCCGCTATCGCGAGCGGGTGAACGACCATATCCGCACCCTGCCCCGTCGCAAGACGCC
CGAGGTGGGTCGCAGCTACATCCTTCGCCCGGCGGAAAGCGACGGGCGGGTCCGGGGTGAAGCGATGCACGACACGGGTC
CGTACGCGACCATCGTCGCCGAGCGCGCCGCCGAAATCGCGACACTCAGCGTCAGCGAGGCCGTGATGCGCCTCGATCTG
GCGGCCTCGACCCTGCTGATGTTCCGCAACAGCACCAGCGACCAGATCAACGTCATCTACCGCCGACAGGACGGCAATAT
CGGCTGGCTGGACCCCAGCCCGGCCTGA

Upstream 100 bases:

>100_bases
GCTTGAGGCCCGAATCCCGACGCCATGACCGGCAGTTTGGAGCGCCGGCATGCATCGTCCGGTTTCGGACGCTCCTCCTC
CATGCAAGGGGTGATGTCAC

Downstream 100 bases:

>100_bases
CCGGCCAGCCGGGGCGATCCATGATCGCCCCGGCACGTCTTTCCCCGGGGACTTCTTCCCGGGGGCTTCATCAATGCACC
AGGGCCGGCACCATCTCGTG

Product: sigma(54) modulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MQISVAGKQIDLSDALKHRVTAHLDRLADKFFDRALDAQVTFSRARSFFTCDINLHAARGLTLRGEGEAADAHGAFDDAA
EHIARRLRRYRERVNDHIRTLPRRKTPEVGRSYILRPAESDGRVRGEAMHDTGPYATIVAERAAEIATLSVSEAVMRLDL
AASTLLMFRNSTSDQINVIYRRQDGNIGWLDPSPA

Sequences:

>Translated_195_residues
MQISVAGKQIDLSDALKHRVTAHLDRLADKFFDRALDAQVTFSRARSFFTCDINLHAARGLTLRGEGEAADAHGAFDDAA
EHIARRLRRYRERVNDHIRTLPRRKTPEVGRSYILRPAESDGRVRGEAMHDTGPYATIVAERAAEIATLSVSEAVMRLDL
AASTLLMFRNSTSDQINVIYRRQDGNIGWLDPSPA
>Mature_195_residues
MQISVAGKQIDLSDALKHRVTAHLDRLADKFFDRALDAQVTFSRARSFFTCDINLHAARGLTLRGEGEAADAHGAFDDAA
EHIARRLRRYRERVNDHIRTLPRRKTPEVGRSYILRPAESDGRVRGEAMHDTGPYATIVAERAAEIATLSVSEAVMRLDL
AASTLLMFRNSTSDQINVIYRRQDGNIGWLDPSPA

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21798; Mature: 21798

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISVAGKQIDLSDALKHRVTAHLDRLADKFFDRALDAQVTFSRARSFFTCDINLHAARG
CEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEEEEEEEECCC
LTLRGEGEAADAHGAFDDAAEHIARRLRRYRERVNDHIRTLPRRKTPEVGRSYILRPAES
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCC
DGRVRGEAMHDTGPYATIVAERAAEIATLSVSEAVMRLDLAASTLLMFRNSTSDQINVIY
CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
RRQDGNIGWLDPSPA
EECCCCEECCCCCCC
>Mature Secondary Structure
MQISVAGKQIDLSDALKHRVTAHLDRLADKFFDRALDAQVTFSRARSFFTCDINLHAARG
CEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEEEEEEEECCC
LTLRGEGEAADAHGAFDDAAEHIARRLRRYRERVNDHIRTLPRRKTPEVGRSYILRPAES
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCC
DGRVRGEAMHDTGPYATIVAERAAEIATLSVSEAVMRLDLAASTLLMFRNSTSDQINVIY
CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
RRQDGNIGWLDPSPA
EECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 3034856 [H]