| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is flbA [H]
Identifier: 162147868
GI number: 162147868
Start: 2130972
End: 2132849
Strand: Reverse
Name: flbA [H]
Synonym: GDI_2084
Alternate gene names: 162147868
Gene position: 2132849-2130972 (Counterclockwise)
Preceding gene: 162147876
Following gene: 162147867
Centisome position: 54.08
GC content: 73.38
Gene sequence:
>1878_bases GTGGCACTGCGGGCGCCAGTGTGGGCGATGGCACGGCGCGATGGCAACCGGGGGCAGGGGATGGACAAACGGCAGGCGGC CCCCGACGGGCCGGACAGCGCGGCACGGGCCATGGCGCTGCTTGAAGCCGGGGACCGCGACGGGGCGCTGGCGCTGCTTC ACGCCGCCCTGTCCGCGCGGCCCGCGTGCCGGGATGCCGACGTCCTGCACGGCATGGCCTGCGTCGCCCGTGCCGCCGGG CGGCCGGACCTTGCGATCGGGCTGGCGGGCAAGGCCGTCGCGCTGCTGCCGGCGGCGCATTTTCACATCACCCTGGGCTG CGCCCTGCGCGAGCAGGGCCATGTGGAGGAGGCCCGCGCCGCGCTGGCGGTGGCCGTACTGCGCGAACCGCGCGACGCGC GCGCCCACGCCGCCCTGGCCGGCGCGCTGGGTGAACTGGGCCGCTGGGCGGAGGCCGAGGCCAGCCTGCGCGCGGCGCGG GCCCTGTGTCCCGGTGACATGGCCCCCCTACTGGCGGATCGGGGCCAGCCCGCGGGGGCCGAGGCGCTGTATCGGCAGAT CGTCCGGCTTCTCCCCGATGACGGGGCGGCCTGGGCCAATCATGGCGCCGCGCTGTTCGCGCTGAACCGGCACGAGGACG CCCGCGTCGCGCTGGAGCACGCCGCTGCCCTGGCGCCCGGCGTCGCGGAAACGCAGAACAATCTGGGGCTGGTCCTGATG GCGCTGGGTCATCTGCCGCAGGCCCGGACCGCCCTGGAACGAGCCAGGATTCTGGCGCCGGGCGATGCGCGGATCGCGGT CAATGCCGCGACCATTCTGGACGAACTGGCCGAGGGGGATGCGGCCGAGGCCCTGTACCGCGCCGTCCTGCGCGACCCCA TCCTGGCGCGGGAGGCGGAGGGCGCGCGGGCCCAGTTCAATCTGGGAACATTGCTGCTGGCGCGTGGCGCGTACGCCGAG GGATGGCGCCATCTGGAAGCCCGATCCCGCCTGCTGCCACCCATGCGCGGGCAGGGCGTCGCGGAATGGGACGGGGCGTC ACTGCCGCGCGGGCGCGTGCTGCTATATGCCGAGCAGGGGCTGGGTGACGCGATCCAGTTCCTGCGCTACCTGCCCGACT GCCTGCGCCGCGCGTCCGTTGTGCTGGATGTGCCGCACAGCCTGCACCGGCTGTTGCAAACGATGCCCGATCCGGACGGG CAGATCGCGACGCGGTGCACCGTCCTGCCGCCAGGGGACCCGCTGCCGGACGATGTGGTGGCGCGCTGCGGCCTGATCAG CCTGCCGCATCGGCTGGGCATGACCGATATTCCGCCCTTCGCGCCCTATCTGCTGCCGGCACCCGCGCCCGACCTGGGGG AGAGGCCCCGGGTAGGGTTGTGCTGGGCGGGCAATCCGTCCTTCCGCTTCGATCGAAGGCGGTCGATCCCGGCGCATCGG CTGGCCCCACTGGCCGACGTGCCGGGCCTGTTTTTCGTCAGCCTCCAGTACGGTCCGGCCGCCGCCGCGCCGCCCTTCGC GCTGGAGCGGTCAGCGGAAGGCGACATGCTGGACACCGCCCGGATCGTCGCCGGACTGGATCTGGTGATCACCGTCGATA CCGCCATCGCCCATCTGGCCGGCGCGATGGGCAGACCAGTCTGGCTGCTGAACCGCTTCGGCGGCGACTGGCGCTGGTCC GCCACCTTCGACCGTGCCGAGCCCCCGCGCTGGGGCGACCGGGGCAGCCGCTGGTATCCTTCTCTGGAACAGTTCCGCCA GCACCAGCCGGACGATCCCGACACCGCCTGGGCCGCGCCGATCGAGGCCGTGCACGCGGCGTTGCTTCGCTGGCGGGTTG GTTTCGCCACGGGGCCTCTTGCGGATAAATCCGCGTAG
Upstream 100 bases:
>100_bases GGATTCCCAGGGCGTTGCGGATACGGCCGATGCGCGCAAAATGGGTCGTCAGGTCCGTGTAGGCGTGCTGGGGCATGATG TCGTCCTCGGCCAGTCGGGT
Downstream 100 bases:
>100_bases AACGCCGGTATTGAGCGATTTTTCAAACCCATGTCCGCGACGAATAGGTGCCATATATCAATAATGACAATGGTATTAAC GTTTTCTTAACCAGTGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MALRAPVWAMARRDGNRGQGMDKRQAAPDGPDSAARAMALLEAGDRDGALALLHAALSARPACRDADVLHGMACVARAAG RPDLAIGLAGKAVALLPAAHFHITLGCALREQGHVEEARAALAVAVLREPRDARAHAALAGALGELGRWAEAEASLRAAR ALCPGDMAPLLADRGQPAGAEALYRQIVRLLPDDGAAWANHGAALFALNRHEDARVALEHAAALAPGVAETQNNLGLVLM ALGHLPQARTALERARILAPGDARIAVNAATILDELAEGDAAEALYRAVLRDPILAREAEGARAQFNLGTLLLARGAYAE GWRHLEARSRLLPPMRGQGVAEWDGASLPRGRVLLYAEQGLGDAIQFLRYLPDCLRRASVVLDVPHSLHRLLQTMPDPDG QIATRCTVLPPGDPLPDDVVARCGLISLPHRLGMTDIPPFAPYLLPAPAPDLGERPRVGLCWAGNPSFRFDRRRSIPAHR LAPLADVPGLFFVSLQYGPAAAAPPFALERSAEGDMLDTARIVAGLDLVITVDTAIAHLAGAMGRPVWLLNRFGGDWRWS ATFDRAEPPRWGDRGSRWYPSLEQFRQHQPDDPDTAWAAPIEAVHAALLRWRVGFATGPLADKSA
Sequences:
>Translated_625_residues MALRAPVWAMARRDGNRGQGMDKRQAAPDGPDSAARAMALLEAGDRDGALALLHAALSARPACRDADVLHGMACVARAAG RPDLAIGLAGKAVALLPAAHFHITLGCALREQGHVEEARAALAVAVLREPRDARAHAALAGALGELGRWAEAEASLRAAR ALCPGDMAPLLADRGQPAGAEALYRQIVRLLPDDGAAWANHGAALFALNRHEDARVALEHAAALAPGVAETQNNLGLVLM ALGHLPQARTALERARILAPGDARIAVNAATILDELAEGDAAEALYRAVLRDPILAREAEGARAQFNLGTLLLARGAYAE GWRHLEARSRLLPPMRGQGVAEWDGASLPRGRVLLYAEQGLGDAIQFLRYLPDCLRRASVVLDVPHSLHRLLQTMPDPDG QIATRCTVLPPGDPLPDDVVARCGLISLPHRLGMTDIPPFAPYLLPAPAPDLGERPRVGLCWAGNPSFRFDRRRSIPAHR LAPLADVPGLFFVSLQYGPAAAAPPFALERSAEGDMLDTARIVAGLDLVITVDTAIAHLAGAMGRPVWLLNRFGGDWRWS ATFDRAEPPRWGDRGSRWYPSLEQFRQHQPDDPDTAWAAPIEAVHAALLRWRVGFATGPLADKSA >Mature_624_residues ALRAPVWAMARRDGNRGQGMDKRQAAPDGPDSAARAMALLEAGDRDGALALLHAALSARPACRDADVLHGMACVARAAGR PDLAIGLAGKAVALLPAAHFHITLGCALREQGHVEEARAALAVAVLREPRDARAHAALAGALGELGRWAEAEASLRAARA LCPGDMAPLLADRGQPAGAEALYRQIVRLLPDDGAAWANHGAALFALNRHEDARVALEHAAALAPGVAETQNNLGLVLMA LGHLPQARTALERARILAPGDARIAVNAATILDELAEGDAAEALYRAVLRDPILAREAEGARAQFNLGTLLLARGAYAEG WRHLEARSRLLPPMRGQGVAEWDGASLPRGRVLLYAEQGLGDAIQFLRYLPDCLRRASVVLDVPHSLHRLLQTMPDPDGQ IATRCTVLPPGDPLPDDVVARCGLISLPHRLGMTDIPPFAPYLLPAPAPDLGERPRVGLCWAGNPSFRFDRRRSIPAHRL APLADVPGLFFVSLQYGPAAAAPPFALERSAEGDMLDTARIVAGLDLVITVDTAIAHLAGAMGRPVWLLNRFGGDWRWSA TFDRAEPPRWGDRGSRWYPSLEQFRQHQPDDPDTAWAAPIEAVHAALLRWRVGFATGPLADKSA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=250, Percent_Identity=27.2, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI32307150, Length=250, Percent_Identity=27.2, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115532692, Length=198, Percent_Identity=28.7878787878788, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115532690, Length=198, Percent_Identity=28.7878787878788, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24656717, Length=261, Percent_Identity=27.5862068965517, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI18110006, Length=261, Percent_Identity=27.5862068965517, Blast_Score=86, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66761; Mature: 66630
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRAPVWAMARRDGNRGQGMDKRQAAPDGPDSAARAMALLEAGDRDGALALLHAALSAR CCCCCCHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PACRDADVLHGMACVARAAGRPDLAIGLAGKAVALLPAAHFHITLGCALREQGHVEEARA CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHEECCEEEEEEEEHHCCCCCHHHHHH ALAVAVLREPRDARAHAALAGALGELGRWAEAEASLRAARALCPGDMAPLLADRGQPAGA HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCH EALYRQIVRLLPDDGAAWANHGAALFALNRHEDARVALEHAAALAPGVAETQNNLGLVLM HHHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCEEEH ALGHLPQARTALERARILAPGDARIAVNAATILDELAEGDAAEALYRAVLRDPILAREAE HHCCCCHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCC GARAQFNLGTLLLARGAYAEGWRHLEARSRLLPPMRGQGVAEWDGASLPRGRVLLYAEQG CCCEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LGDAIQFLRYLPDCLRRASVVLDVPHSLHRLLQTMPDPDGQIATRCTVLPPGDPLPDDVV CHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHH ARCGLISLPHRLGMTDIPPFAPYLLPAPAPDLGERPRVGLCWAGNPSFRFDRRRSIPAHR HHCCHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCHHH LAPLADVPGLFFVSLQYGPAAAAPPFALERSAEGDMLDTARIVAGLDLVITVDTAIAHLA CCCHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHCCEEEEEHHHHHHHHH GAMGRPVWLLNRFGGDWRWSATFDRAEPPRWGDRGSRWYPSLEQFRQHQPDDPDTAWAAP HHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHH IEAVHAALLRWRVGFATGPLADKSA HHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ALRAPVWAMARRDGNRGQGMDKRQAAPDGPDSAARAMALLEAGDRDGALALLHAALSAR CCCCCHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PACRDADVLHGMACVARAAGRPDLAIGLAGKAVALLPAAHFHITLGCALREQGHVEEARA CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHEECCEEEEEEEEHHCCCCCHHHHHH ALAVAVLREPRDARAHAALAGALGELGRWAEAEASLRAARALCPGDMAPLLADRGQPAGA HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCH EALYRQIVRLLPDDGAAWANHGAALFALNRHEDARVALEHAAALAPGVAETQNNLGLVLM HHHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCEEEH ALGHLPQARTALERARILAPGDARIAVNAATILDELAEGDAAEALYRAVLRDPILAREAE HHCCCCHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCC GARAQFNLGTLLLARGAYAEGWRHLEARSRLLPPMRGQGVAEWDGASLPRGRVLLYAEQG CCCEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LGDAIQFLRYLPDCLRRASVVLDVPHSLHRLLQTMPDPDGQIATRCTVLPPGDPLPDDVV CHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHH ARCGLISLPHRLGMTDIPPFAPYLLPAPAPDLGERPRVGLCWAGNPSFRFDRRRSIPAHR HHCCHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCHHH LAPLADVPGLFFVSLQYGPAAAAPPFALERSAEGDMLDTARIVAGLDLVITVDTAIAHLA CCCHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHCCEEEEEHHHHHHHHH GAMGRPVWLLNRFGGDWRWSATFDRAEPPRWGDRGSRWYPSLEQFRQHQPDDPDTAWAAP HHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHH IEAVHAALLRWRVGFATGPLADKSA HHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]