| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yeiJ [C]
Identifier: 162147859
GI number: 162147859
Start: 2119404
End: 2120645
Strand: Reverse
Name: yeiJ [C]
Synonym: GDI_2075
Alternate gene names: 162147859
Gene position: 2120645-2119404 (Counterclockwise)
Preceding gene: 162147865
Following gene: 162147858
Centisome position: 53.77
GC content: 68.28
Gene sequence:
>1242_bases GTGCCTGTCCTGCATGGAATCCTTGGTCTTGCCGGCCTGATCGGACTGGCCGTGGCGTTTTCGACCGACCGGCGGGCCAT TCGCCCCCGCATTGTCCTGGCCGCCGGCCTGATGCAGGTGGCGCTGGGCGGCATGGTGCTGTTCGTCCCGCCGGGGCGCC ACGCGCTGCATGCGCTGTCCGGCGCGGTCGATACCGTGCTGGGATACGGCGCGCAGGGCAGTCTGTTCCTGTTCGGCGCG CTGGTCGATCCGCGCATGAACACGCTGTTTCCCCATACCGGATTCATCTTCGCGTTCCGCGTCCTGCCGCAGATCGTCTA TGTCTCGGCCCTGATCGCGATCCTGTATCATTACCGGGTCATGCAGCGCCTGGCGGCGCTTCTGGGCGGGGCGGTCCGCC GGGCGCTGGGGACATCGACGATCGAATCCTTCTCCGCCGTCACCACCATCTTCCTGGGGCAGAGCGAGATGCCCGTGGCT CTGCGCCCCTACGTCCCGCTGCTGACGCGGGCGGAACTGTTCGCGGTGATGTCCAGCGGTACCGCCTCGGTCGCCGGGTC GGTTCTGGCGGGCTATGCCGGCCTGGGCGTGCCGATGGACTATCTGCTGGCGGCGTCGGTCATGGCCATTCCCGGCGGCC TGCTGTTCGCCAAGATCCTGATGCCCGCGCGCGAGGCCACGCGCATCACCCGGCTGGACCTGGAATTCGGGCACGAACAC CCCGCCACCGTCTTCGAGGCCGTGGCCATCGGGGCCGCCAGCGGCGTGGGCGTCGCGGTCGCGGTCGGCAGCATGCTGAT CGCCTTCATCGGCCTGATCGCGCTGGCCAATGGCATGATCCACGGGCTGGGCGGCTGGCTGGGCATCGCGGACCTGTCGC TGGAACGGCTGTTCGGCGTCGTGTTCGCCCCTCTGGCATGGCTGATCGGCGTGCCGTGGCATGAATGCGGCGTGGTCGGC GCGATCATGGGCCAGAAGCTGGTGTTCAACGAATTCGTGGCCTACGTCGCCCTGGCACCGCATTTCCACGACGCGGCGCT CGATCCCAGGGCGCTGGCCATCGCGTCGTTCGCGCTGTGCGGGTTCGCCAACCTGTCGTCGATCGGCATCCTGATCGCGG GTTTCGGCAGCGTGGCCCCGGAGCGCAGGGCGGACGTCGCGAAGATGGGCCTGCGCGCGGTCATGGCAGGATCGCTGTCG AATTTCGCCAGTGCGACCATTGCGGGTATGTTCGTCGGGTGA
Upstream 100 bases:
>100_bases AGCAGTTTCCCATGCGACACGAGTACCGGCGGGCCGCGGGCGCTGGACAGCGCCCCGCGCAGCGCACAATCTCGTTTCGT CCTGGTATTGGTGAGGCGAC
Downstream 100 bases:
>100_bases TGGTCCGGGGACCGTCTGTCATCCATCAGTGGAGGAATGCCATGACATTCACCCGCACGGCTCTTCTTGCCACCCTTATG ATGTCCGGGCTGATGTCCGG
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MPVLHGILGLAGLIGLAVAFSTDRRAIRPRIVLAAGLMQVALGGMVLFVPPGRHALHALSGAVDTVLGYGAQGSLFLFGA LVDPRMNTLFPHTGFIFAFRVLPQIVYVSALIAILYHYRVMQRLAALLGGAVRRALGTSTIESFSAVTTIFLGQSEMPVA LRPYVPLLTRAELFAVMSSGTASVAGSVLAGYAGLGVPMDYLLAASVMAIPGGLLFAKILMPAREATRITRLDLEFGHEH PATVFEAVAIGAASGVGVAVAVGSMLIAFIGLIALANGMIHGLGGWLGIADLSLERLFGVVFAPLAWLIGVPWHECGVVG AIMGQKLVFNEFVAYVALAPHFHDAALDPRALAIASFALCGFANLSSIGILIAGFGSVAPERRADVAKMGLRAVMAGSLS NFASATIAGMFVG
Sequences:
>Translated_413_residues MPVLHGILGLAGLIGLAVAFSTDRRAIRPRIVLAAGLMQVALGGMVLFVPPGRHALHALSGAVDTVLGYGAQGSLFLFGA LVDPRMNTLFPHTGFIFAFRVLPQIVYVSALIAILYHYRVMQRLAALLGGAVRRALGTSTIESFSAVTTIFLGQSEMPVA LRPYVPLLTRAELFAVMSSGTASVAGSVLAGYAGLGVPMDYLLAASVMAIPGGLLFAKILMPAREATRITRLDLEFGHEH PATVFEAVAIGAASGVGVAVAVGSMLIAFIGLIALANGMIHGLGGWLGIADLSLERLFGVVFAPLAWLIGVPWHECGVVG AIMGQKLVFNEFVAYVALAPHFHDAALDPRALAIASFALCGFANLSSIGILIAGFGSVAPERRADVAKMGLRAVMAGSLS NFASATIAGMFVG >Mature_412_residues PVLHGILGLAGLIGLAVAFSTDRRAIRPRIVLAAGLMQVALGGMVLFVPPGRHALHALSGAVDTVLGYGAQGSLFLFGAL VDPRMNTLFPHTGFIFAFRVLPQIVYVSALIAILYHYRVMQRLAALLGGAVRRALGTSTIESFSAVTTIFLGQSEMPVAL RPYVPLLTRAELFAVMSSGTASVAGSVLAGYAGLGVPMDYLLAASVMAIPGGLLFAKILMPAREATRITRLDLEFGHEHP ATVFEAVAIGAASGVGVAVAVGSMLIAFIGLIALANGMIHGLGGWLGIADLSLERLFGVVFAPLAWLIGVPWHECGVVGA IMGQKLVFNEFVAYVALAPHFHDAALDPRALAIASFALCGFANLSSIGILIAGFGSVAPERRADVAKMGLRAVMAGSLSN FASATIAGMFVG
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=376, Percent_Identity=35.6382978723404, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI42542381, Length=417, Percent_Identity=33.5731414868106, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI227116277, Length=418, Percent_Identity=31.3397129186603, Blast_Score=204, Evalue=1e-52, Organism=Escherichia coli, GI1788485, Length=414, Percent_Identity=48.792270531401, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI1788488, Length=414, Percent_Identity=48.5507246376812, Blast_Score=381, Evalue=1e-107, Organism=Escherichia coli, GI1788737, Length=408, Percent_Identity=32.5980392156863, Blast_Score=189, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17560276, Length=396, Percent_Identity=32.8282828282828, Blast_Score=222, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71991794, Length=413, Percent_Identity=30.9927360774818, Blast_Score=197, Evalue=6e-51, Organism=Caenorhabditis elegans, GI25146537, Length=217, Percent_Identity=29.4930875576037, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI45552519, Length=393, Percent_Identity=36.1323155216285, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI45552517, Length=393, Percent_Identity=36.1323155216285, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI19921868, Length=393, Percent_Identity=36.1323155216285, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI281360430, Length=407, Percent_Identity=33.9066339066339, Blast_Score=234, Evalue=8e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 42830; Mature: 42699
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLHGILGLAGLIGLAVAFSTDRRAIRPRIVLAAGLMQVALGGMVLFVPPGRHALHALS CCHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH GAVDTVLGYGAQGSLFLFGALVDPRMNTLFPHTGFIFAFRVLPQIVYVSALIAILYHYRV HHHHHHHCCCCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRLAALLGGAVRRALGTSTIESFSAVTTIFLGQSEMPVALRPYVPLLTRAELFAVMSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCHHHHHHHHHHHHHHCC TASVAGSVLAGYAGLGVPMDYLLAASVMAIPGGLLFAKILMPAREATRITRLDLEFGHEH CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHEEEEHHCCCCC PATVFEAVAIGAASGVGVAVAVGSMLIAFIGLIALANGMIHGLGGWLGIADLSLERLFGV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAPLAWLIGVPWHECGVVGAIMGQKLVFNEFVAYVALAPHFHDAALDPRALAIASFALC HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH GFANLSSIGILIAGFGSVAPERRADVAKMGLRAVMAGSLSNFASATIAGMFVG HHCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PVLHGILGLAGLIGLAVAFSTDRRAIRPRIVLAAGLMQVALGGMVLFVPPGRHALHALS CHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH GAVDTVLGYGAQGSLFLFGALVDPRMNTLFPHTGFIFAFRVLPQIVYVSALIAILYHYRV HHHHHHHCCCCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRLAALLGGAVRRALGTSTIESFSAVTTIFLGQSEMPVALRPYVPLLTRAELFAVMSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCHHHHHHHHHHHHHHCC TASVAGSVLAGYAGLGVPMDYLLAASVMAIPGGLLFAKILMPAREATRITRLDLEFGHEH CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHEEEEHHCCCCC PATVFEAVAIGAASGVGVAVAVGSMLIAFIGLIALANGMIHGLGGWLGIADLSLERLFGV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAPLAWLIGVPWHECGVVGAIMGQKLVFNEFVAYVALAPHFHDAALDPRALAIASFALC HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH GFANLSSIGILIAGFGSVAPERRADVAKMGLRAVMAGSLSNFASATIAGMFVG HHCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]