Click here to switch to the map view.

The map label for this gene is 162147827

Identifier: 162147827

GI number: 162147827

Start: 2087541

End: 2088212

Strand: Direct

Name: 162147827

Synonym: GDI_2043

Alternate gene names: NA

Gene position: 2087541-2088212 (Clockwise)

Preceding gene: 162147826

Following gene: 162147831

Centisome position: 52.93

GC content: 71.43

Gene sequence:

>672_bases
ATGACCGGGAACGAGGACGATTTGGACGCGCTGTTGTGTCAGGTGCGGGCCTGCCGGGCCTGCGCCGACAGCCTGCCCCT
GGGGCCGCGGCCGATCCTGCACGTTTCGTCCACCGCGCGGCTGCTGATCGCGAGCCAGGCCCCGGGTACGCGGGTGCATG
AAACCGGGATATCGTTCAACGACGCCTCGGGCGACCGGCTGCGTGGCTGGCTGGAGATGGATCGCGCGACCTTCTACGAT
TCCAGCCGCGTTGCCCTGCTGCCGATGGGCCTGTGCTATCCGGGCCGCCTGCCCGCCGGCGGCGACCGACCGCCCCGGCC
CGAATGCGCGCCGCTGTGGCGTGCGCGGCTTCTGGCCCTGATGCCGTGCATCCGACTGACCCTGCTGGTCGGCTCCTATG
CCCAGGCGGCCGTGCTGGGCCCGGGGCGGGTGGAGGACCGAGTGCGGAATTTTCGCGCCCTGCTGCCCCATTATTTTCCC
CTGCCCCACCCGTCCTGGCGCACCGGGGCATGGGAGCGCCGGAATCCGTGGTTCACGGCCGAGGTGATCCCGGCGCTGCG
TGCCGCCATCCGGCCGCTGCTCGACCCGCCGTCAGGACGCGACGGCGGCCCGGACGATGGTCAGGGCCAGTCCCTTGATC
CCCGCCGAGAGGATCTGCACCCCGATGCATAG

Upstream 100 bases:

>100_bases
TCAATCTGGAGGCCCCCGCCGTTCCGACGGCGTTCGAGCGCAGCATGGTGGGCGCCGCCACCCGGATGGTGCCGCGCTGG
GTCGACGAAGTCCTGGCCGG

Downstream 100 bases:

>100_bases
CAGGATCAGGGCAGCCAGGCGGGACACGATCCGCGCGCCGGTCACGCCCAGCAGCGCCATCAGCCGTTCGGCATAGGCAT
AGGCCAGCCAGATCGTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTGNEDDLDALLCQVRACRACADSLPLGPRPILHVSSTARLLIASQAPGTRVHETGISFNDASGDRLRGWLEMDRATFYD
SSRVALLPMGLCYPGRLPAGGDRPPRPECAPLWRARLLALMPCIRLTLLVGSYAQAAVLGPGRVEDRVRNFRALLPHYFP
LPHPSWRTGAWERRNPWFTAEVIPALRAAIRPLLDPPSGRDGGPDDGQGQSLDPRREDLHPDA

Sequences:

>Translated_223_residues
MTGNEDDLDALLCQVRACRACADSLPLGPRPILHVSSTARLLIASQAPGTRVHETGISFNDASGDRLRGWLEMDRATFYD
SSRVALLPMGLCYPGRLPAGGDRPPRPECAPLWRARLLALMPCIRLTLLVGSYAQAAVLGPGRVEDRVRNFRALLPHYFP
LPHPSWRTGAWERRNPWFTAEVIPALRAAIRPLLDPPSGRDGGPDDGQGQSLDPRREDLHPDA
>Mature_222_residues
TGNEDDLDALLCQVRACRACADSLPLGPRPILHVSSTARLLIASQAPGTRVHETGISFNDASGDRLRGWLEMDRATFYDS
SRVALLPMGLCYPGRLPAGGDRPPRPECAPLWRARLLALMPCIRLTLLVGSYAQAAVLGPGRVEDRVRNFRALLPHYFPL
PHPSWRTGAWERRNPWFTAEVIPALRAAIRPLLDPPSGRDGGPDDGQGQSLDPRREDLHPDA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24508; Mature: 24377

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNEDDLDALLCQVRACRACADSLPLGPRPILHVSSTARLLIASQAPGTRVHETGISFN
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCEEECCCCCCC
DASGDRLRGWLEMDRATFYDSSRVALLPMGLCYPGRLPAGGDRPPRPECAPLWRARLLAL
CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
MPCIRLTLLVGSYAQAAVLGPGRVEDRVRNFRALLPHYFPLPHPSWRTGAWERRNPWFTA
HHHHHHHHHHHCHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
EVIPALRAAIRPLLDPPSGRDGGPDDGQGQSLDPRREDLHPDA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
TGNEDDLDALLCQVRACRACADSLPLGPRPILHVSSTARLLIASQAPGTRVHETGISFN
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCEEECCCCCCC
DASGDRLRGWLEMDRATFYDSSRVALLPMGLCYPGRLPAGGDRPPRPECAPLWRARLLAL
CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
MPCIRLTLLVGSYAQAAVLGPGRVEDRVRNFRALLPHYFPLPHPSWRTGAWERRNPWFTA
HHHHHHHHHHHCHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
EVIPALRAAIRPLLDPPSGRDGGPDDGQGQSLDPRREDLHPDA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]