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The map label for this gene is 162147813

Identifier: 162147813

GI number: 162147813

Start: 2071871

End: 2074543

Strand: Direct

Name: 162147813

Synonym: GDI_2029

Alternate gene names: NA

Gene position: 2071871-2074543 (Clockwise)

Preceding gene: 162147809

Following gene: 162147814

Centisome position: 52.53

GC content: 71.34

Gene sequence:

>2673_bases
ATGCTGGGTGTACCCTCGGGGGCTGGCCCCCTTCGCGCCGTGCGACGCTCCTCCAACCCCATGACCGCCCAGCGTGTCAG
GGCGATTCTCGGTCCGACCAATACAGGGAAGACCCACCTCGCCATCGAACGCCTGCTGGCGCATTCCAGCGGCATCATCG
GCTTTCCGCTCCGGCTGCTGGCGCGCGAGAATTACGAACGCATGGTCGCCGCCAAGGGGGCCGCCTCCGTCGCGCTGATC
ACGGGCGAGGAAAAGATCGTCCCGCCGAACGCCCGCTGGTTTTCCTGTACCGTCGAGGCCATGCCCCTGGACCAGATGGC
GGAATTCGTCGCGGTCGATGAAATCCAGCTCTGCGCCGATCCCGATCGGGGGCATGTCTTCACCGACCGGCTGCTGCACG
CCCGCGGACTCGTCGAAACGATGTTCCTGGGCGCGGAAACGATTCGCCCCCTGCTGCGCCGGCTGGTGCCGGGGGTGGAA
ATCGAAAGCCGCCCGCGCCTGTCCCAGTTGACCCATCTGGGCGGAAGCAAGCTGACACGCCTGCCGCCGCGATCGGCCAT
CGTCGCGTTCTCGGCAACCGAAGTGTATGCCATTGCGGAACTGATCCGCCGCCGCCGGGGCGGATGCGCGGTGGTCATGG
GCCAGTTGTCGCCCCGCACCCGCAACGCGCAGGTGGCGCTGTACCAGGATCGCGAGGTCGATTACCTGGTGGCGACGGAC
GCGATCGGCATGGGGCTGAACATGGACGTCAACCATGTGGCGTTCGCCGGCCTGTCGAAATTCGACGGCGCCCGCGCCCG
CCCGCTGTCGCCGGCGGAAATCGCGCAGATCGCGGGGCGGGCCGGACGGGGCATGCGCGACGGCACGTTCGGCACCACGG
GCACCTGCCCCGCCCTGCCGGACGAGATTGCCGAAGCGGTGGAGACCCATCGTTTCGACCCGATCGAGCGGCTGTTCTGG
CGGAACAGCGACCTGGATTTCGCCGGCCCCGACGCGCTGCTGGCCAGCCTGAACCGCCCCCCGCCGACCCATGGCCTGAC
GGCGGGCAATGAGGCATCGGACGTGATGACCCTGTCCAGCCTGGCGTCGGTGCCGGACATCCGGGCGCTGGTCCGGTCCT
CGCGCGCCACACGGCTGCTGTGGGACGCCTGCCAGATCCCGGATTTCCGCAAGCTTGGCGATGAGACGCACACCAGGCTG
TGCGCCCGAATCTTCACCCATGTCATCCGCGACGGACATGTTCCCGAGGCCTGGATGGAGTCGCAGATCGCGGCCTTTGC
CCGCCCCGAAGGCGATATCGATTCGCTGATGCACCGCCTGTCGGGCATTCGCGTCTGTTCCTACATCGCCGCGCGCCGCG
ACTGGGTGCGCGATGCCGCGCGCTGGCAGGAGCGTGCGCGCGTGGTCGAGGACCAGTTGTCGGACGCGCTGCATGAACGG
CTGACGGCGCGCTTCGTGGACCGGCGGGCGGCATCGCTGATCCGCCGCCTGGACGAATCGTCGGGCGATGACGAGTTGCT
GTCCGCCGTCACCAGCCGAGGCGAGGTCGTGGTCGAGGGCCACCCGGTGGGGCGCGTCGCCGGCCTGGACCTGCTGCCCG
ACCCGGACTGCGATCATCCGGACCGGCGGCTGCTGCTGCGCGCCGCGCGCCGGGCCCTGCGGTCCGAAATACCCCGTCGC
GTCCGCGTCCTGACGGCGGCGGATGACGGCGAGTTCGATTTTTCGGCCGACGGGCGGTTCCTGGTCTGGGACGATGCCCC
CATTGCGCGGCTGCGCGGCGGCGAGGACATGCTGCGCCCGCGGATCGAGGTGCTGGACAATGCCTTCCTGGACGGTGTCC
AGCGCGAACGCGTCCGCGCGCGCCTGGCCGCCTGGTTGGACCGCCAGGTGCAGGACGTCATGGCACCCCTGTTCGCCGCA
CGCGCCGCCGTCGAGCAGGACCCGGCGCTGCGCGGCGTCATGCATCGCCTGATGGAACAGGGCGGCGTGGTCGCGGACGT
CGGCCCCCTGTCCCCGGTGTTGCGGGCCCGGCTGAAGACGCTGGGGGTACGGGTCGGGCGGCACGCGGTGCTGATGCCCG
CGCTGCTGCGCCCCCATGCCATGCGCCTGCGCGCTATCCTGCTGGCCGTGCGCGCCGGCCGGCCGATCCCGGCCATCCCG
TCCGCTGGCGCGGTGTCGGTGCCGGTGGACGACCCGCGCGACCTGTTGCTGGCGCCGCTGGGCTGGATCGTGGCGGGGCC
GGTGCGGCTGCGCCTGGACATTGCCGAAAAGATGTCCGCCGAATTGCGCTGGCGGGCGCGCAACGGCCCGGTCCCGCTGC
CCGACGGCCTGTCGTCGCGCCTGGGCGTCCGGCCCGAGGCCGTGGCCGCGATCCTGAAGGCGCTGGATATTCCCGTCCGC
GCGGCCCGCCCGCTGAAGGACAGCGAATACGGCCCCGTCGCGCCGCCGATGCTGGCCGTCACCCAGGACGCGCGACGGCG
CCAGCGGCAACAGCAACAGCGCACACGCCCCGTCCCGGTCGAAATGGACCGTCCCGCCGGGCCCGCCACCGGATTCGCGG
TGGCGGATCGATCCCGCCCCGCGCCCCGGCCCGGCGGCGAGCGCCGGCCGGCGACGCATGTCCCGGACGGCCCTTTCGCC
GCACTGGCGGTGCTGAAACAGCGCCGGTCATGA

Upstream 100 bases:

>100_bases
TGCGTCCCTGGCGGCGGCAACGCAACCGCCGGCGCGCAATTCCACGTTTCCCATGCGGGTTTTGCTTGCAATCCGTCCGG
CGCCATCTGAGCATGTACCC

Downstream 100 bases:

>100_bases
AGGAAGACCGCCACCCAGCCGCCAGCGGGGCGGATGACGCCGCGATCGCGGCGCAGCGGCTGGATTTGTGGCTGTGGTGC
GCCCGGTTCGCGCGACATCG

Product: helicase

Products: NA

Alternate protein names: Helicase Domain Protein; Helicase; Helicase-Like; Helicase Conserved C-Terminal Domain Protein; ATP-Dependent Helicase; ATP-Dependent RNA Helicase; ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase Protein; MgpS ATP-Dependent Helicase; RNA Helicase; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Superfamily II DNA And RNA Helicase; ATP-Dependent RNA And DNA Helicase; ATP Dependent RNA Helicase; Adenosinetriphosphatase; RNA Helicase RhrA; ATP-Dependent Helicase MgpS; ATP-Dependent RNA Helicase Superfamily II; Helicase C-Terminal Domain Protein; DEAD/DEAH Box Helicase Domain-Containing Protein; DNA Helicase; ATP-Dependent DNA And RNA Helicase Protein

Number of amino acids: Translated: 890; Mature: 890

Protein sequence:

>890_residues
MLGVPSGAGPLRAVRRSSNPMTAQRVRAILGPTNTGKTHLAIERLLAHSSGIIGFPLRLLARENYERMVAAKGAASVALI
TGEEKIVPPNARWFSCTVEAMPLDQMAEFVAVDEIQLCADPDRGHVFTDRLLHARGLVETMFLGAETIRPLLRRLVPGVE
IESRPRLSQLTHLGGSKLTRLPPRSAIVAFSATEVYAIAELIRRRRGGCAVVMGQLSPRTRNAQVALYQDREVDYLVATD
AIGMGLNMDVNHVAFAGLSKFDGARARPLSPAEIAQIAGRAGRGMRDGTFGTTGTCPALPDEIAEAVETHRFDPIERLFW
RNSDLDFAGPDALLASLNRPPPTHGLTAGNEASDVMTLSSLASVPDIRALVRSSRATRLLWDACQIPDFRKLGDETHTRL
CARIFTHVIRDGHVPEAWMESQIAAFARPEGDIDSLMHRLSGIRVCSYIAARRDWVRDAARWQERARVVEDQLSDALHER
LTARFVDRRAASLIRRLDESSGDDELLSAVTSRGEVVVEGHPVGRVAGLDLLPDPDCDHPDRRLLLRAARRALRSEIPRR
VRVLTAADDGEFDFSADGRFLVWDDAPIARLRGGEDMLRPRIEVLDNAFLDGVQRERVRARLAAWLDRQVQDVMAPLFAA
RAAVEQDPALRGVMHRLMEQGGVVADVGPLSPVLRARLKTLGVRVGRHAVLMPALLRPHAMRLRAILLAVRAGRPIPAIP
SAGAVSVPVDDPRDLLLAPLGWIVAGPVRLRLDIAEKMSAELRWRARNGPVPLPDGLSSRLGVRPEAVAAILKALDIPVR
AARPLKDSEYGPVAPPMLAVTQDARRRQRQQQQRTRPVPVEMDRPAGPATGFAVADRSRPAPRPGGERRPATHVPDGPFA
ALAVLKQRRS

Sequences:

>Translated_890_residues
MLGVPSGAGPLRAVRRSSNPMTAQRVRAILGPTNTGKTHLAIERLLAHSSGIIGFPLRLLARENYERMVAAKGAASVALI
TGEEKIVPPNARWFSCTVEAMPLDQMAEFVAVDEIQLCADPDRGHVFTDRLLHARGLVETMFLGAETIRPLLRRLVPGVE
IESRPRLSQLTHLGGSKLTRLPPRSAIVAFSATEVYAIAELIRRRRGGCAVVMGQLSPRTRNAQVALYQDREVDYLVATD
AIGMGLNMDVNHVAFAGLSKFDGARARPLSPAEIAQIAGRAGRGMRDGTFGTTGTCPALPDEIAEAVETHRFDPIERLFW
RNSDLDFAGPDALLASLNRPPPTHGLTAGNEASDVMTLSSLASVPDIRALVRSSRATRLLWDACQIPDFRKLGDETHTRL
CARIFTHVIRDGHVPEAWMESQIAAFARPEGDIDSLMHRLSGIRVCSYIAARRDWVRDAARWQERARVVEDQLSDALHER
LTARFVDRRAASLIRRLDESSGDDELLSAVTSRGEVVVEGHPVGRVAGLDLLPDPDCDHPDRRLLLRAARRALRSEIPRR
VRVLTAADDGEFDFSADGRFLVWDDAPIARLRGGEDMLRPRIEVLDNAFLDGVQRERVRARLAAWLDRQVQDVMAPLFAA
RAAVEQDPALRGVMHRLMEQGGVVADVGPLSPVLRARLKTLGVRVGRHAVLMPALLRPHAMRLRAILLAVRAGRPIPAIP
SAGAVSVPVDDPRDLLLAPLGWIVAGPVRLRLDIAEKMSAELRWRARNGPVPLPDGLSSRLGVRPEAVAAILKALDIPVR
AARPLKDSEYGPVAPPMLAVTQDARRRQRQQQQRTRPVPVEMDRPAGPATGFAVADRSRPAPRPGGERRPATHVPDGPFA
ALAVLKQRRS
>Mature_890_residues
MLGVPSGAGPLRAVRRSSNPMTAQRVRAILGPTNTGKTHLAIERLLAHSSGIIGFPLRLLARENYERMVAAKGAASVALI
TGEEKIVPPNARWFSCTVEAMPLDQMAEFVAVDEIQLCADPDRGHVFTDRLLHARGLVETMFLGAETIRPLLRRLVPGVE
IESRPRLSQLTHLGGSKLTRLPPRSAIVAFSATEVYAIAELIRRRRGGCAVVMGQLSPRTRNAQVALYQDREVDYLVATD
AIGMGLNMDVNHVAFAGLSKFDGARARPLSPAEIAQIAGRAGRGMRDGTFGTTGTCPALPDEIAEAVETHRFDPIERLFW
RNSDLDFAGPDALLASLNRPPPTHGLTAGNEASDVMTLSSLASVPDIRALVRSSRATRLLWDACQIPDFRKLGDETHTRL
CARIFTHVIRDGHVPEAWMESQIAAFARPEGDIDSLMHRLSGIRVCSYIAARRDWVRDAARWQERARVVEDQLSDALHER
LTARFVDRRAASLIRRLDESSGDDELLSAVTSRGEVVVEGHPVGRVAGLDLLPDPDCDHPDRRLLLRAARRALRSEIPRR
VRVLTAADDGEFDFSADGRFLVWDDAPIARLRGGEDMLRPRIEVLDNAFLDGVQRERVRARLAAWLDRQVQDVMAPLFAA
RAAVEQDPALRGVMHRLMEQGGVVADVGPLSPVLRARLKTLGVRVGRHAVLMPALLRPHAMRLRAILLAVRAGRPIPAIP
SAGAVSVPVDDPRDLLLAPLGWIVAGPVRLRLDIAEKMSAELRWRARNGPVPLPDGLSSRLGVRPEAVAAILKALDIPVR
AARPLKDSEYGPVAPPMLAVTQDARRRQRQQQQRTRPVPVEMDRPAGPATGFAVADRSRPAPRPGGERRPATHVPDGPFA
ALAVLKQRRS

Specific function: Unknown

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543667, Length=272, Percent_Identity=37.5, Blast_Score=136, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI115532784, Length=302, Percent_Identity=31.7880794701987, Blast_Score=109, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI115532782, Length=302, Percent_Identity=31.7880794701987, Blast_Score=109, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6325228, Length=271, Percent_Identity=35.7933579335793, Blast_Score=141, Evalue=4e-34,
Organism=Drosophila melanogaster, GI221329989, Length=272, Percent_Identity=35.6617647058824, Blast_Score=125, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97509; Mature: 97509

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVPSGAGPLRAVRRSSNPMTAQRVRAILGPTNTGKTHLAIERLLAHSSGIIGFPLRLL
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
ARENYERMVAAKGAASVALITGEEKIVPPNARWFSCTVEAMPLDQMAEFVAVDEIQLCAD
HHHCHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHEECC
PDRGHVFTDRLLHARGLVETMFLGAETIRPLLRRLVPGVEIESRPRLSQLTHLGGSKLTR
CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
LPPRSAIVAFSATEVYAIAELIRRRRGGCAVVMGQLSPRTRNAQVALYQDREVDYLVATD
CCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEC
AIGMGLNMDVNHVAFAGLSKFDGARARPLSPAEIAQIAGRAGRGMRDGTFGTTGTCPALP
HHCCCCCCCHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
DEIAEAVETHRFDPIERLFWRNSDLDFAGPDALLASLNRPPPTHGLTAGNEASDVMTLSS
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
LASVPDIRALVRSSRATRLLWDACQIPDFRKLGDETHTRLCARIFTHVIRDGHVPEAWME
HHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
SQIAAFARPEGDIDSLMHRLSGIRVCSYIAARRDWVRDAARWQERARVVEDQLSDALHER
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTARFVDRRAASLIRRLDESSGDDELLSAVTSRGEVVVEGHPVGRVAGLDLLPDPDCDHP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCH
DRRLLLRAARRALRSEIPRRVRVLTAADDGEFDFSADGRFLVWDDAPIARLRGGEDMLRP
HHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHH
RIEVLDNAFLDGVQRERVRARLAAWLDRQVQDVMAPLFAARAAVEQDPALRGVMHRLMEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GGVVADVGPLSPVLRARLKTLGVRVGRHAVLMPALLRPHAMRLRAILLAVRAGRPIPAIP
CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
SAGAVSVPVDDPRDLLLAPLGWIVAGPVRLRLDIAEKMSAELRWRARNGPVPLPDGLSSR
CCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHEEECCCCCCCCCCCCHHH
LGVRPEAVAAILKALDIPVRAARPLKDSEYGPVAPPMLAVTQDARRRQRQQQQRTRPVPV
CCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
EMDRPAGPATGFAVADRSRPAPRPGGERRPATHVPDGPFAALAVLKQRRS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLGVPSGAGPLRAVRRSSNPMTAQRVRAILGPTNTGKTHLAIERLLAHSSGIIGFPLRLL
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
ARENYERMVAAKGAASVALITGEEKIVPPNARWFSCTVEAMPLDQMAEFVAVDEIQLCAD
HHHCHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHEECC
PDRGHVFTDRLLHARGLVETMFLGAETIRPLLRRLVPGVEIESRPRLSQLTHLGGSKLTR
CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
LPPRSAIVAFSATEVYAIAELIRRRRGGCAVVMGQLSPRTRNAQVALYQDREVDYLVATD
CCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEC
AIGMGLNMDVNHVAFAGLSKFDGARARPLSPAEIAQIAGRAGRGMRDGTFGTTGTCPALP
HHCCCCCCCHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
DEIAEAVETHRFDPIERLFWRNSDLDFAGPDALLASLNRPPPTHGLTAGNEASDVMTLSS
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
LASVPDIRALVRSSRATRLLWDACQIPDFRKLGDETHTRLCARIFTHVIRDGHVPEAWME
HHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
SQIAAFARPEGDIDSLMHRLSGIRVCSYIAARRDWVRDAARWQERARVVEDQLSDALHER
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTARFVDRRAASLIRRLDESSGDDELLSAVTSRGEVVVEGHPVGRVAGLDLLPDPDCDHP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCH
DRRLLLRAARRALRSEIPRRVRVLTAADDGEFDFSADGRFLVWDDAPIARLRGGEDMLRP
HHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHH
RIEVLDNAFLDGVQRERVRARLAAWLDRQVQDVMAPLFAARAAVEQDPALRGVMHRLMEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GGVVADVGPLSPVLRARLKTLGVRVGRHAVLMPALLRPHAMRLRAILLAVRAGRPIPAIP
CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
SAGAVSVPVDDPRDLLLAPLGWIVAGPVRLRLDIAEKMSAELRWRARNGPVPLPDGLSSR
CCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHEEECCCCCCCCCCCCHHH
LGVRPEAVAAILKALDIPVRAARPLKDSEYGPVAPPMLAVTQDARRRQRQQQQRTRPVPV
CCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
EMDRPAGPATGFAVADRSRPAPRPGGERRPATHVPDGPFAALAVLKQRRS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA