| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yheS [H]
Identifier: 162147799
GI number: 162147799
Start: 2055436
End: 2057313
Strand: Direct
Name: yheS [H]
Synonym: GDI_2015
Alternate gene names: 162147799
Gene position: 2055436-2057313 (Clockwise)
Preceding gene: 162147797
Following gene: 162147804
Centisome position: 52.11
GC content: 71.88
Gene sequence:
>1878_bases GTGAGCCTGCTCGTCATTTCCGACCTGACCCTTCGCATCGCGGGACGCACCCTGCTGGACGGCGCGTCGCTGACCGTCGA TCCGGGGCGCAAGATCGGCCTGGTCGGGCGGAACGGGGCCGGAAAATCCACCCTGCTGGCCGCGATCGCGGGCGATATCG CACCGGACGGCGGCACCATCCACCTGTCGTCGCGCGCGCGCATGGCCCGCATCCGGCAGGAAGCCCCGTCGGGCGACGCC AACCTGCTGGACACGGTGCTGGCCGGCGACGCCGAACGCACCGCCCTGATGGCCGAAGCCGACCAGACCCCCGACCCGGT GCGGCTGGCCGACATCCATGAACGGCTGCGGGCGATCGGGGCCGACAGCGCGCCCGCGCGCGCCGCGACCATCCTGTCGG GCCTGGGCTTCGACGCCGACGCCCAGGCCCGCCCGGTGTCGGATTTTTCCGGCGGCTGGCGCATGCGCGTGGCGCTGGCC ACGGCGCTGTTCCTCAACCCCGACCTGCTGCTGCTGGACGAACCGACCAACCATCTGGACCTGGATGCCACGATCTGGCT GGAAAACTGGCTGTCCCGCTTTGCCGGGGCGGCGCTGATCGTCAGTCATGATCGCGGGTTGCTGGACCGGGCGGTGGATG CCATCGCACATCTGGACCAACGCAAGCTGACGCTGACGCCGGGCGGATACAGCGAATTCGTGCGCATCCGCACCGAACAG GCCCTGCAGCAGGCCCGGGCGGCGGAACGGATCGCGGCGCAGCGCGCCCACATGCAATCCTTCGTCGATCGCTTCCGCGC CAAGGCGACCAAGGCGCGGCAGGCCCAGGCACGGCTGAAGGCGCTGGAGAAGCTGCCGGTCCTGGACACCGTGGTCGAGG ATGCGCCCACCCGCTTCGCCTTCCCCGAACCCGCGCCCCTGCCCCCGCCGATGCTGACGCTGGACCGGGTTTCGGTCGGC TATGGCGGCCGGCCGATCCTGTCCGGCCTGACCCTGCGGCTGGACATGGAGGATAGGATCGCCCTGCTGGGCGCCAACGG CAACGGCAAATCGACCTTCGCCAAGCTGATCGCGGGACGGCTGGCGCCGATTTCGGGCACCGTGGCGCATGGTCCGCGCC TGCGCGTCGGCTATTTCGCCCAGCATCAGGCGGAGGAACTGGTTCCCGGCGAAACGCCGGTCGATCACATGACCCGCGTC ATGCCCAAGGCACCGCCCACCGCCGTGCGGGCGCAACTGGCCCGCTTCGGGCTGGATGCCGACCGCGCCGACACGGTGAC GCGGGACCTGTCGGGCGGCGAGAAGGCGCGGCTGCTGCTGGCGCTGGCCACGCGTGAGGCACCGCACCTGCTGATCCTGG ACGAACCGACCAACCATCTGGACCTGGACGCGCGCGAGGCCCTGATCCGCGCCCTGGCGGAATTCGAGGGGGCCGTACTG CTGATCAGCCATGACCCGCACCTGGTCGAACTGGTCGCCGACCGGCTGTGGCTGGTGGGCGACGGCACCGTGCGGCCCTT CGACGGCGACATGGCGGAATATCGGACATGGCTGTCCGAACGCGCCCGGGCGGCCACCCGCCCGGCCACCCCGGCGGCCC CCCGCCGCGACGACAGGCGCGAACGCGCCGAAGCCCGCAAGGCCATCGCCCCCCTCCGCCGGAAGGCACGGGACGCCGAA GCCCGGATGAGCCGCCTGGCCGACGAGCGCGGCCGGCTGGAAACCCGGCTGGCCGACCCCGCGCTCTATGCCGCCGGCGG CGCCGACGAGGTCACGGCGATCAACACGCGGCTGGCCGCCATCGGGCGCGAGCAGGAAGAGGCCGAGGAGGAGTGGCTGC TGGCCGAGGCGGCGATCGAGGAAAGCGCCGCCGAGTGA
Upstream 100 bases:
>100_bases GTTCACGTGGCGGAGCACGACGCCCGCCACGCACGGGATTGCATAACTATCAAAGGGTTGGCCAGGCGTGCCGGCCCGTT CTTCCGGAGCCCCGTATCCC
Downstream 100 bases:
>100_bases GCCGACTAGTCCGCCGACGCGGTCACGGCTGCTCGGTTGGGGACGCATCCCCCAATGCGCCCGCCGCGAAAGCGAGGCTG GAGGCGGCGATCAGGGCGGC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MSLLVISDLTLRIAGRTLLDGASLTVDPGRKIGLVGRNGAGKSTLLAAIAGDIAPDGGTIHLSSRARMARIRQEAPSGDA NLLDTVLAGDAERTALMAEADQTPDPVRLADIHERLRAIGADSAPARAATILSGLGFDADAQARPVSDFSGGWRMRVALA TALFLNPDLLLLDEPTNHLDLDATIWLENWLSRFAGAALIVSHDRGLLDRAVDAIAHLDQRKLTLTPGGYSEFVRIRTEQ ALQQARAAERIAAQRAHMQSFVDRFRAKATKARQAQARLKALEKLPVLDTVVEDAPTRFAFPEPAPLPPPMLTLDRVSVG YGGRPILSGLTLRLDMEDRIALLGANGNGKSTFAKLIAGRLAPISGTVAHGPRLRVGYFAQHQAEELVPGETPVDHMTRV MPKAPPTAVRAQLARFGLDADRADTVTRDLSGGEKARLLLALATREAPHLLILDEPTNHLDLDAREALIRALAEFEGAVL LISHDPHLVELVADRLWLVGDGTVRPFDGDMAEYRTWLSERARAATRPATPAAPRRDDRRERAEARKAIAPLRRKARDAE ARMSRLADERGRLETRLADPALYAAGGADEVTAINTRLAAIGREQEEAEEEWLLAEAAIEESAAE
Sequences:
>Translated_625_residues MSLLVISDLTLRIAGRTLLDGASLTVDPGRKIGLVGRNGAGKSTLLAAIAGDIAPDGGTIHLSSRARMARIRQEAPSGDA NLLDTVLAGDAERTALMAEADQTPDPVRLADIHERLRAIGADSAPARAATILSGLGFDADAQARPVSDFSGGWRMRVALA TALFLNPDLLLLDEPTNHLDLDATIWLENWLSRFAGAALIVSHDRGLLDRAVDAIAHLDQRKLTLTPGGYSEFVRIRTEQ ALQQARAAERIAAQRAHMQSFVDRFRAKATKARQAQARLKALEKLPVLDTVVEDAPTRFAFPEPAPLPPPMLTLDRVSVG YGGRPILSGLTLRLDMEDRIALLGANGNGKSTFAKLIAGRLAPISGTVAHGPRLRVGYFAQHQAEELVPGETPVDHMTRV MPKAPPTAVRAQLARFGLDADRADTVTRDLSGGEKARLLLALATREAPHLLILDEPTNHLDLDAREALIRALAEFEGAVL LISHDPHLVELVADRLWLVGDGTVRPFDGDMAEYRTWLSERARAATRPATPAAPRRDDRRERAEARKAIAPLRRKARDAE ARMSRLADERGRLETRLADPALYAAGGADEVTAINTRLAAIGREQEEAEEEWLLAEAAIEESAAE >Mature_624_residues SLLVISDLTLRIAGRTLLDGASLTVDPGRKIGLVGRNGAGKSTLLAAIAGDIAPDGGTIHLSSRARMARIRQEAPSGDAN LLDTVLAGDAERTALMAEADQTPDPVRLADIHERLRAIGADSAPARAATILSGLGFDADAQARPVSDFSGGWRMRVALAT ALFLNPDLLLLDEPTNHLDLDATIWLENWLSRFAGAALIVSHDRGLLDRAVDAIAHLDQRKLTLTPGGYSEFVRIRTEQA LQQARAAERIAAQRAHMQSFVDRFRAKATKARQAQARLKALEKLPVLDTVVEDAPTRFAFPEPAPLPPPMLTLDRVSVGY GGRPILSGLTLRLDMEDRIALLGANGNGKSTFAKLIAGRLAPISGTVAHGPRLRVGYFAQHQAEELVPGETPVDHMTRVM PKAPPTAVRAQLARFGLDADRADTVTRDLSGGEKARLLLALATREAPHLLILDEPTNHLDLDAREALIRALAEFEGAVLL ISHDPHLVELVADRLWLVGDGTVRPFDGDMAEYRTWLSERARAATRPATPAAPRRDDRRERAEARKAIAPLRRKARDAEA RMSRLADERGRLETRLADPALYAAGGADEVTAINTRLAAIGREQEEAEEEWLLAEAAIEESAAE
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=532, Percent_Identity=40.7894736842105, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI27881506, Length=527, Percent_Identity=37.5711574952562, Blast_Score=357, Evalue=2e-98, Organism=Homo sapiens, GI10947137, Length=527, Percent_Identity=37.5711574952562, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI10947135, Length=537, Percent_Identity=38.3612662942272, Blast_Score=296, Evalue=4e-80, Organism=Homo sapiens, GI69354671, Length=537, Percent_Identity=38.3612662942272, Blast_Score=296, Evalue=5e-80, Organism=Escherichia coli, GI1789751, Length=629, Percent_Identity=45.4689984101749, Blast_Score=538, Evalue=1e-154, Organism=Escherichia coli, GI1787041, Length=523, Percent_Identity=33.8432122370937, Blast_Score=308, Evalue=7e-85, Organism=Escherichia coli, GI1787182, Length=642, Percent_Identity=30.3738317757009, Blast_Score=248, Evalue=8e-67, Organism=Escherichia coli, GI2367384, Length=550, Percent_Identity=30.9090909090909, Blast_Score=202, Evalue=5e-53, Organism=Escherichia coli, GI1788165, Length=184, Percent_Identity=34.2391304347826, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1789891, Length=253, Percent_Identity=27.6679841897233, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1787164, Length=201, Percent_Identity=31.8407960199005, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789873, Length=214, Percent_Identity=30.8411214953271, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788506, Length=215, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=29.0909090909091, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1786563, Length=214, Percent_Identity=28.9719626168224, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=28.7671232876712, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI145693107, Length=209, Percent_Identity=29.1866028708134, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1789864, Length=237, Percent_Identity=25.7383966244726, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=27.6995305164319, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI1789586, Length=222, Percent_Identity=31.0810810810811, Blast_Score=62, Evalue=8e-11, Organism=Escherichia coli, GI1787792, Length=92, Percent_Identity=35.8695652173913, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17553372, Length=527, Percent_Identity=40.4174573055028, Blast_Score=366, Evalue=1e-101, Organism=Caenorhabditis elegans, GI17559834, Length=540, Percent_Identity=37.037037037037, Blast_Score=339, Evalue=3e-93, Organism=Caenorhabditis elegans, GI17555318, Length=535, Percent_Identity=34.7663551401869, Blast_Score=330, Evalue=1e-90, Organism=Caenorhabditis elegans, GI17541710, Length=187, Percent_Identity=31.0160427807487, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17565938, Length=224, Percent_Identity=27.2321428571429, Blast_Score=70, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=36.1623616236162, Blast_Score=364, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=32.7683615819209, Blast_Score=303, Evalue=8e-83, Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=31.0606060606061, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6324314, Length=380, Percent_Identity=28.9473684210526, Blast_Score=153, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6323278, Length=389, Percent_Identity=27.7634961439589, Blast_Score=144, Evalue=4e-35, Organism=Drosophila melanogaster, GI24666836, Length=524, Percent_Identity=41.793893129771, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=36.2637362637363, Blast_Score=355, Evalue=6e-98, Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=36.2637362637363, Blast_Score=355, Evalue=6e-98, Organism=Drosophila melanogaster, GI24641342, Length=536, Percent_Identity=37.8731343283582, Blast_Score=346, Evalue=2e-95, Organism=Drosophila melanogaster, GI17136662, Length=178, Percent_Identity=30.8988764044944, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24659289, Length=178, Percent_Identity=28.6516853932584, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI221500365, Length=204, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007184, Length=204, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24653245, Length=204, Percent_Identity=28.921568627451, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363262, Length=204, Percent_Identity=28.921568627451, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI23397593, Length=250, Percent_Identity=28.4, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 67604; Mature: 67473
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLVISDLTLRIAGRTLLDGASLTVDPGRKIGLVGRNGAGKSTLLAAIAGDIAPDGGTI CEEEEEECCEEEECCCCEECCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE HLSSRARMARIRQEAPSGDANLLDTVLAGDAERTALMAEADQTPDPVRLADIHERLRAIG EECCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHC ADSAPARAATILSGLGFDADAQARPVSDFSGGWRMRVALATALFLNPDLLLLDEPTNHLD CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCC LDATIWLENWLSRFAGAALIVSHDRGLLDRAVDAIAHLDQRKLTLTPGGYSEFVRIRTEQ CCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH ALQQARAAERIAAQRAHMQSFVDRFRAKATKARQAQARLKALEKLPVLDTVVEDAPTRFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC FPEPAPLPPPMLTLDRVSVGYGGRPILSGLTLRLDMEDRIALLGANGNGKSTFAKLIAGR CCCCCCCCCCCEEECCEECCCCCCHHHCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHH LAPISGTVAHGPRLRVGYFAQHQAEELVPGETPVDHMTRVMPKAPPTAVRAQLARFGLDA CCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCC DRADTVTRDLSGGEKARLLLALATREAPHLLILDEPTNHLDLDAREALIRALAEFEGAVL CHHHHHHHHCCCCCHHEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE LISHDPHLVELVADRLWLVGDGTVRPFDGDMAEYRTWLSERARAATRPATPAAPRRDDRR EEECCCHHHHHHHHCEEEEECCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH ERAEARKAIAPLRRKARDAEARMSRLADERGRLETRLADPALYAAGGADEVTAINTRLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCHHHHHHHHHH IGREQEEAEEEWLLAEAAIEESAAE HCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLLVISDLTLRIAGRTLLDGASLTVDPGRKIGLVGRNGAGKSTLLAAIAGDIAPDGGTI EEEEEECCEEEECCCCEECCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE HLSSRARMARIRQEAPSGDANLLDTVLAGDAERTALMAEADQTPDPVRLADIHERLRAIG EECCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHC ADSAPARAATILSGLGFDADAQARPVSDFSGGWRMRVALATALFLNPDLLLLDEPTNHLD CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCC LDATIWLENWLSRFAGAALIVSHDRGLLDRAVDAIAHLDQRKLTLTPGGYSEFVRIRTEQ CCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH ALQQARAAERIAAQRAHMQSFVDRFRAKATKARQAQARLKALEKLPVLDTVVEDAPTRFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC FPEPAPLPPPMLTLDRVSVGYGGRPILSGLTLRLDMEDRIALLGANGNGKSTFAKLIAGR CCCCCCCCCCCEEECCEECCCCCCHHHCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHH LAPISGTVAHGPRLRVGYFAQHQAEELVPGETPVDHMTRVMPKAPPTAVRAQLARFGLDA CCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCC DRADTVTRDLSGGEKARLLLALATREAPHLLILDEPTNHLDLDAREALIRALAEFEGAVL CHHHHHHHHCCCCCHHEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE LISHDPHLVELVADRLWLVGDGTVRPFDGDMAEYRTWLSERARAATRPATPAAPRRDDRR EEECCCHHHHHHHHCEEEEECCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH ERAEARKAIAPLRRKARDAEARMSRLADERGRLETRLADPALYAAGGADEVTAINTRLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCHHHHHHHHHH IGREQEEAEEEWLLAEAAIEESAAE HCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]