| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ubiG [H]
Identifier: 162147692
GI number: 162147692
Start: 1942877
End: 1943638
Strand: Reverse
Name: ubiG [H]
Synonym: GDI_1908
Alternate gene names: 162147692
Gene position: 1943638-1942877 (Counterclockwise)
Preceding gene: 162147696
Following gene: 162147686
Centisome position: 49.28
GC content: 71.26
Gene sequence:
>762_bases ATGAATGTAAACGATTCGTCTTCTCGGGCGGCCCATCCAGCCGGGCATTCCGTCGCGCCGGACGAGATCGCGCGATTCAG TGCCCTGGCGGACCGCTGGTGGGACCCTTCCGGGCCGATGCGGCCGCTGCACGCCATGAACGGCCTGCGCCTGGACTGGG CCCGGCGCCACCTGCCCGCCCCCGGCACCCCCGGCGAGCCTGCCACCCGCCTGCTGGATATCGGCTGCGGCGCGGGCCTG GCCAGCGAGGGCCTGGCCCGGATGGGCTATGACGTGACCGGGCTGGATGCCTCGGACGCCGCCATCGCCGCCGCGCGCGC GCACCTGGCGGATCATCCCCTGCCCCCCGATGGCGGGTCCCTGGCCTATCGCGTCGGCAGCGCCGAGGAACTCCAGGCCG AAGGGGCGCGATTCGCGGCCATCACGGCACTGGAAGTGATCGAGCACGTGACCGATCCCGCCGCGTTCCTGCGCGTGCTG GCCGACATGGTGGCGCCGGGCGGGGTCATCATCGTCTCGACCCTGAACCGCACCCTGCGGTCGCTGGCGACGGCGAAGAT CGGGGCGGAATACATCCTGCGCCTGCTGCCGGCCGGCACGCATGAATGGCGCAAGTTCATCACGCCCGCGGAACTGGGCG CCTTCGCCAGCCAGGCCGGATTGCGCGTGTCCGACATCGCGGGAATGGTCCCCGCCCTGGGCGGCTGGCGCGAAAGCCAT GACCTGGGCGTCAACTACATCGCCAGCCTGTCCGCTCCTTAA
Upstream 100 bases:
>100_bases GCGCCGGACGGGGCATTGCGGTTATCTGCAAGGCGCGTCACATACCCTTCCACCGCTGCGCCGTCCAGCGGCAGATGGTC AGCGGAAAGGTGGTGAAGCC
Downstream 100 bases:
>100_bases CTGCGCTGACCAGCCGCCATAATTCAGTTTCGGTTCGGAAACGTGGGCTAGTGAGCGGGAGCGGAACGCAGTGGAGCGCA GCAGACGCGCGTCGGATCGC
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNVNDSSSRAAHPAGHSVAPDEIARFSALADRWWDPSGPMRPLHAMNGLRLDWARRHLPAPGTPGEPATRLLDIGCGAGL ASEGLARMGYDVTGLDASDAAIAAARAHLADHPLPPDGGSLAYRVGSAEELQAEGARFAAITALEVIEHVTDPAAFLRVL ADMVAPGGVIIVSTLNRTLRSLATAKIGAEYILRLLPAGTHEWRKFITPAELGAFASQAGLRVSDIAGMVPALGGWRESH DLGVNYIASLSAP
Sequences:
>Translated_253_residues MNVNDSSSRAAHPAGHSVAPDEIARFSALADRWWDPSGPMRPLHAMNGLRLDWARRHLPAPGTPGEPATRLLDIGCGAGL ASEGLARMGYDVTGLDASDAAIAAARAHLADHPLPPDGGSLAYRVGSAEELQAEGARFAAITALEVIEHVTDPAAFLRVL ADMVAPGGVIIVSTLNRTLRSLATAKIGAEYILRLLPAGTHEWRKFITPAELGAFASQAGLRVSDIAGMVPALGGWRESH DLGVNYIASLSAP >Mature_253_residues MNVNDSSSRAAHPAGHSVAPDEIARFSALADRWWDPSGPMRPLHAMNGLRLDWARRHLPAPGTPGEPATRLLDIGCGAGL ASEGLARMGYDVTGLDASDAAIAAARAHLADHPLPPDGGSLAYRVGSAEELQAEGARFAAITALEVIEHVTDPAAFLRVL ADMVAPGGVIIVSTLNRTLRSLATAKIGAEYILRLLPAGTHEWRKFITPAELGAFASQAGLRVSDIAGMVPALGGWRESH DLGVNYIASLSAP
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=240, Percent_Identity=38.3333333333333, Blast_Score=167, Evalue=8e-42, Organism=Escherichia coli, GI1788564, Length=238, Percent_Identity=38.655462184874, Blast_Score=165, Evalue=2e-42, Organism=Caenorhabditis elegans, GI115533050, Length=232, Percent_Identity=36.2068965517241, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6324476, Length=279, Percent_Identity=29.7491039426523, Blast_Score=121, Evalue=9e-29, Organism=Drosophila melanogaster, GI24585589, Length=226, Percent_Identity=32.3008849557522, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI281365311, Length=204, Percent_Identity=33.8235294117647, Blast_Score=124, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 26468; Mature: 26468
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVNDSSSRAAHPAGHSVAPDEIARFSALADRWWDPSGPMRPLHAMNGLRLDWARRHLPA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEHHHHHCCCC PGTPGEPATRLLDIGCGAGLASEGLARMGYDVTGLDASDAAIAAARAHLADHPLPPDGGS CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC LAYRVGSAEELQAEGARFAAITALEVIEHVTDPAAFLRVLADMVAPGGVIIVSTLNRTLR EEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH SLATAKIGAEYILRLLPAGTHEWRKFITPAELGAFASQAGLRVSDIAGMVPALGGWRESH HHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCH DLGVNYIASLSAP HCCHHHHHCCCCC >Mature Secondary Structure MNVNDSSSRAAHPAGHSVAPDEIARFSALADRWWDPSGPMRPLHAMNGLRLDWARRHLPA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEHHHHHCCCC PGTPGEPATRLLDIGCGAGLASEGLARMGYDVTGLDASDAAIAAARAHLADHPLPPDGGS CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC LAYRVGSAEELQAEGARFAAITALEVIEHVTDPAAFLRVLADMVAPGGVIIVSTLNRTLR EEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH SLATAKIGAEYILRLLPAGTHEWRKFITPAELGAFASQAGLRVSDIAGMVPALGGWRESH HHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCH DLGVNYIASLSAP HCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA