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The map label for this gene is 162147634

Identifier: 162147634

GI number: 162147634

Start: 1888712

End: 1889302

Strand: Reverse

Name: 162147634

Synonym: GDI_1850

Alternate gene names: NA

Gene position: 1889302-1888712 (Counterclockwise)

Preceding gene: 162147635

Following gene: 162147631

Centisome position: 47.9

GC content: 65.14

Gene sequence:

>591_bases
ATGAGCATGTTCAGAACGACCCCGAAGGGCGGCGTGACCGATGCGATGGCCCGCACCGCCGCTGCCGCAACCGCCGCGCA
GGCCAAGACCAAGGTCAAGGATGAGGACCCGTTCCGCGAAGGCGACGCCATCGTCTATGCCGCGCATGGCGTCGGACGGG
TGGATCGCATCGGCATTGACGAGATCGCGGGCACCAAGCTGGAAATGATCCAGATTTCGTTTCCCGGCAACCAGATGACC
CTGCGCATTCCGCTGGCGAAGGCGCGCAAGGCGGGATTGCGCAAGATCGTGTCGCGCGAAATCGTGGACAAGGCGATGGC
GATCATCAAGGGAAAGCCGCATGTCAGCCGTGGCATGTGGGCCCGCCGCGCCGTCGCCTACCAGGAAAAGATCAATTCCG
GCGACCTGGTGCAGATCGCCGAGGTGCTGCGCGACCTGCGCCGCAATGTCGACAGCCTGGACGGCAGCTTCAGCGAGCGC
AAGCTGTTCGAAGCCGCCCAGGAACGCTTCGTGGCCGAGGTCGCGGTGCTGGAGGGCAAGGAACCCACGGCGGTTCTGGA
AGCCCTGACGGCGGCGATGAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCGGCCCCATTGCGCCGGTGCGCGGCGTGCAATCCTGACCACACCCCCACCCGGCGGGGGACCGAGACATGTTACGAAA
AATGTGATATACAGTATTGC

Downstream 100 bases:

>100_bases
CGCCCCTCCCCGGGATGATGGAAAAAGGCCCTGAAAGCGCGTCTTCCAGGGCCTTTTTCATGCCCGGCCGCCGTGCGGAA
GGGCTGCGGCCGGAACGGGA

Product: CarD family transcriptional regulator

Products: NA

Alternate protein names: CarD Family Transcriptional Regulator; Transcriptional Regulator; Transcription Factor CarD; Transcription Factor; CarD-Like Transcriptional Regulator; Transcriptional Factor Regulator; Transcriptional Regulator Card Family; Transcriptional Regulator CarD Family Protein; CarD-Like Transcriptional Regulator Family; CarD-Family Transcriptional Regulator; CarD Transcriptional Regulator-Like Protein; Transcriptional Regulator Protein CarD Family; CarD-Like Transcriptional Regulator Protein; CarD-Like Protein; Transcription Regulator CarD; CarD Transcriptional Regulator; Transcription Factor Protein; Transcriptional Regulator CarD; CarD-Like Transcriptional Regulator Family Protein; Transcriptional Regulator Of CarD Family; CarD-Like Transcriptional Factor; Transcriptional Regulator Card Domain Protein

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSMFRTTPKGGVTDAMARTAAAATAAQAKTKVKDEDPFREGDAIVYAAHGVGRVDRIGIDEIAGTKLEMIQISFPGNQMT
LRIPLAKARKAGLRKIVSREIVDKAMAIIKGKPHVSRGMWARRAVAYQEKINSGDLVQIAEVLRDLRRNVDSLDGSFSER
KLFEAAQERFVAEVAVLEGKEPTAVLEALTAAMKAA

Sequences:

>Translated_196_residues
MSMFRTTPKGGVTDAMARTAAAATAAQAKTKVKDEDPFREGDAIVYAAHGVGRVDRIGIDEIAGTKLEMIQISFPGNQMT
LRIPLAKARKAGLRKIVSREIVDKAMAIIKGKPHVSRGMWARRAVAYQEKINSGDLVQIAEVLRDLRRNVDSLDGSFSER
KLFEAAQERFVAEVAVLEGKEPTAVLEALTAAMKAA
>Mature_195_residues
SMFRTTPKGGVTDAMARTAAAATAAQAKTKVKDEDPFREGDAIVYAAHGVGRVDRIGIDEIAGTKLEMIQISFPGNQMTL
RIPLAKARKAGLRKIVSREIVDKAMAIIKGKPHVSRGMWARRAVAYQEKINSGDLVQIAEVLRDLRRNVDSLDGSFSERK
LFEAAQERFVAEVAVLEGKEPTAVLEALTAAMKAA

Specific function: Unknown

COG id: COG1329

COG function: function code K; Transcriptional regulators, similar to M. xanthus CarD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21279; Mature: 21148

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMFRTTPKGGVTDAMARTAAAATAAQAKTKVKDEDPFREGDAIVYAAHGVGRVDRIGID
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCHH
EIAGTKLEMIQISFPGNQMTLRIPLAKARKAGLRKIVSREIVDKAMAIIKGKPHVSRGMW
HHCCCEEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ARRAVAYQEKINSGDLVQIAEVLRDLRRNVDSLDGSFSERKLFEAAQERFVAEVAVLEGK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
EPTAVLEALTAAMKAA
CHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SMFRTTPKGGVTDAMARTAAAATAAQAKTKVKDEDPFREGDAIVYAAHGVGRVDRIGID
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCHH
EIAGTKLEMIQISFPGNQMTLRIPLAKARKAGLRKIVSREIVDKAMAIIKGKPHVSRGMW
HHCCCEEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ARRAVAYQEKINSGDLVQIAEVLRDLRRNVDSLDGSFSERKLFEAAQERFVAEVAVLEGK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
EPTAVLEALTAAMKAA
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA