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The map label for this gene is 162147572

Identifier: 162147572

GI number: 162147572

Start: 1819441

End: 1820649

Strand: Direct

Name: 162147572

Synonym: GDI_1788

Alternate gene names: NA

Gene position: 1819441-1820649 (Clockwise)

Preceding gene: 162147571

Following gene: 162147576

Centisome position: 46.13

GC content: 66.34

Gene sequence:

>1209_bases
ATGCCGCGCCGCAAGACCGGAGCAGAATTCGTGAAAGACGCGTTTATCGACCTGCTGACCGACATTCGGAAATCGTTCGG
ATGGCTTCCCGGCTCCGTGGCCTCGGTCCTGGTGCTGTGTGCCGCCGCCGTGATGGCCGAACTCTGCAGCCGGGTCGTGA
CCAAGCTGATCCTGCGCATACCGGGGCAGAAGCGCGGGGCCTTCGTCCGCACCTTCACCCTGGCCATGCAGCGGCCGGCG
CGGGTCATGCTGGCGATCATCTTCGTCGGCACCGCGTTGCCGGCGTCCGGCCTGTCGTACGAGACCATGCATCGGGCCGC
GCACGGGTTGCTGGTGCTGTTCGTGCTGATGGTGGGCTACGCCGCCATCGTGGCCATGCGAATCCTGTCCGACGCCTATC
TGCTCCGGATCAACGGCAAGGAGGACCGCGACGACATCCTGTCGCGGACCCACATGACGCAGGTGCGCGTGCTGCGGCGC
ATGGCGGATATCCTGGTCGGGCTGCTGACGGTGGGCTCGGCGCTGATGACGTTCGAATCGGTGCGGGAATACGGGCTCAG
CCTGTTCGCCTCGGCGGGTGCGGCCTCGGTCGTGGTCGGTCTGGCGGCGCGGCCGCTGCTGACCAACCTGATCGCCGGCA
TGCAGATCGCCATGACCCAGCCGATCCGCATGGAAGACCTGATCATCATCAATGGCGACTGGGCGTGGGTCGAGGAAATC
ACCGCGACCTATGTCGTGCTGCGGGTCTGGGACTGGCGCCGGCACATCGTGCCGATTTCCTGGTTCCTGGAAAACCCGTT
CCAGAACTGGACCCACAATTCGGCGGCCCTGATCGGGGTGGTGTTCCTGTACGTGGATTTCCACGCACCGATGGACCGGA
TTCGCGGTCGGCTGCGCGATATCGTGCAGGCAAGCCCGCTATGGGACGGCAAGGTGTTCGATGTCCAGGTGTCGGACTGC
AGCACGCAGGTCATGACCATCCGCGTCATCGCCAGTGCGCGCTCGGCCATGCAGAGCTGGGATCTGCGCTGCGAGATCCG
CGAGAAGATCATCCTGTTCCTGCGCGACGAATGTCCCGAGGCGCTGCCGCGCGAGCGGATGGCCCATGTCTCGTCCCCGG
CCGGCCAGGACGTGCTGGGCCCGCACGGCATCCTGTCCCCCCCGATCGACCGGCCGCCGCCCGGCGCCTATACCGGCCCT
CCAGGCTGA

Upstream 100 bases:

>100_bases
CAACCCGTGCATCGCGATTGATGCGATGCTTCCCACCGTGGTTAAAGAAAACCATCCTTTCCATTGATATGGCTTTGTTC
ATGCACAGTCTGCCACCCCG

Downstream 100 bases:

>100_bases
TTACAGCGCGACCTCTTCACGGCCCAGCCGCGAATGGGAATGGCCGTAGAAGGCGTAGCTGAGCACGCCCAGGACGATGT
AGCTGCCCAGCAGGATGGCC

Product: mechanosensitive ion channel

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel MscS; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Domain-Containing Protein; MscS Family Transporter; Mechanosensitive Ion Channel Protein; MscS Mechanosensitive Ion Channel Protein; Transporter MscS Family; Small-Conductance Mechanosensitive Channel-Like Protein; Mechanosensitive Channel Protein

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MPRRKTGAEFVKDAFIDLLTDIRKSFGWLPGSVASVLVLCAAAVMAELCSRVVTKLILRIPGQKRGAFVRTFTLAMQRPA
RVMLAIIFVGTALPASGLSYETMHRAAHGLLVLFVLMVGYAAIVAMRILSDAYLLRINGKEDRDDILSRTHMTQVRVLRR
MADILVGLLTVGSALMTFESVREYGLSLFASAGAASVVVGLAARPLLTNLIAGMQIAMTQPIRMEDLIIINGDWAWVEEI
TATYVVLRVWDWRRHIVPISWFLENPFQNWTHNSAALIGVVFLYVDFHAPMDRIRGRLRDIVQASPLWDGKVFDVQVSDC
STQVMTIRVIASARSAMQSWDLRCEIREKIILFLRDECPEALPRERMAHVSSPAGQDVLGPHGILSPPIDRPPPGAYTGP
PG

Sequences:

>Translated_402_residues
MPRRKTGAEFVKDAFIDLLTDIRKSFGWLPGSVASVLVLCAAAVMAELCSRVVTKLILRIPGQKRGAFVRTFTLAMQRPA
RVMLAIIFVGTALPASGLSYETMHRAAHGLLVLFVLMVGYAAIVAMRILSDAYLLRINGKEDRDDILSRTHMTQVRVLRR
MADILVGLLTVGSALMTFESVREYGLSLFASAGAASVVVGLAARPLLTNLIAGMQIAMTQPIRMEDLIIINGDWAWVEEI
TATYVVLRVWDWRRHIVPISWFLENPFQNWTHNSAALIGVVFLYVDFHAPMDRIRGRLRDIVQASPLWDGKVFDVQVSDC
STQVMTIRVIASARSAMQSWDLRCEIREKIILFLRDECPEALPRERMAHVSSPAGQDVLGPHGILSPPIDRPPPGAYTGP
PG
>Mature_401_residues
PRRKTGAEFVKDAFIDLLTDIRKSFGWLPGSVASVLVLCAAAVMAELCSRVVTKLILRIPGQKRGAFVRTFTLAMQRPAR
VMLAIIFVGTALPASGLSYETMHRAAHGLLVLFVLMVGYAAIVAMRILSDAYLLRINGKEDRDDILSRTHMTQVRVLRRM
ADILVGLLTVGSALMTFESVREYGLSLFASAGAASVVVGLAARPLLTNLIAGMQIAMTQPIRMEDLIIINGDWAWVEEIT
ATYVVLRVWDWRRHIVPISWFLENPFQNWTHNSAALIGVVFLYVDFHAPMDRIRGRLRDIVQASPLWDGKVFDVQVSDCS
TQVMTIRVIASARSAMQSWDLRCEIREKIILFLRDECPEALPRERMAHVSSPAGQDVLGPHGILSPPIDRPPPGAYTGPP
G

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44584; Mature: 44453

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRKTGAEFVKDAFIDLLTDIRKSFGWLPGSVASVLVLCAAAVMAELCSRVVTKLILRI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGQKRGAFVRTFTLAMQRPARVMLAIIFVGTALPASGLSYETMHRAAHGLLVLFVLMVGY
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAIVAMRILSDAYLLRINGKEDRDDILSRTHMTQVRVLRRMADILVGLLTVGSALMTFES
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREYGLSLFASAGAASVVVGLAARPLLTNLIAGMQIAMTQPIRMEDLIIINGDWAWVEEI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCHHHHHHH
TATYVVLRVWDWRRHIVPISWFLENPFQNWTHNSAALIGVVFLYVDFHAPMDRIRGRLRD
HHHHHHHHHHHHHHHEEEHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVQASPLWDGKVFDVQVSDCSTQVMTIRVIASARSAMQSWDLRCEIREKIILFLRDECPE
HHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
ALPRERMAHVSSPAGQDVLGPHGILSPPIDRPPPGAYTGPPG
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRRKTGAEFVKDAFIDLLTDIRKSFGWLPGSVASVLVLCAAAVMAELCSRVVTKLILRI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGQKRGAFVRTFTLAMQRPARVMLAIIFVGTALPASGLSYETMHRAAHGLLVLFVLMVGY
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAIVAMRILSDAYLLRINGKEDRDDILSRTHMTQVRVLRRMADILVGLLTVGSALMTFES
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREYGLSLFASAGAASVVVGLAARPLLTNLIAGMQIAMTQPIRMEDLIIINGDWAWVEEI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCHHHHHHH
TATYVVLRVWDWRRHIVPISWFLENPFQNWTHNSAALIGVVFLYVDFHAPMDRIRGRLRD
HHHHHHHHHHHHHHHEEEHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVQASPLWDGKVFDVQVSDCSTQVMTIRVIASARSAMQSWDLRCEIREKIILFLRDECPE
HHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
ALPRERMAHVSSPAGQDVLGPHGILSPPIDRPPPGAYTGPPG
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA