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The map label for this gene is hspD [H]

Identifier: 162147513

GI number: 162147513

Start: 1750639

End: 1751151

Strand: Reverse

Name: hspD [H]

Synonym: GDI_1729

Alternate gene names: 162147513

Gene position: 1751151-1750639 (Counterclockwise)

Preceding gene: 162147514

Following gene: 162147512

Centisome position: 44.4

GC content: 68.23

Gene sequence:

>513_bases
ATGACCTATGATTTCGCGCCGCTGTTTCGGACGGCCATCGGTTTCGACCGGCTTGCACGCCTTGTGGACAACGCCGCGCA
AAACCCGGCGGTTCCGTCCTATCCCCCGTACAATATCGAACGGCTGGGTGACGGAAGCTACGTCCTGACCATGGCGGTGG
CGGGCTTCGGCCCGGACGATATCGACCTGACGGTCCAGGATAACATGCTGGTCGTGACGGGGCGCGTCGCCAGCACCGCC
CCGGCCGGCGAACTGCTGCATCGCGGCATCGCCACCCGCGCGTTCGACCGCCGCTTCGCCCTGGCCGATCATATCCTGGT
CGAGGGCGCGGACCTGACGAACGGCCTGCTGCGCATCACCGTCAAGCATGTGGTGCCGGAGGCACTGAAGCCGCGCCGCA
TTCCGATCACCACTGCCTCCCCCGCCGTCGCACCTCCGGCGGAACCGGAACGGGTCGAAGCCCCCGCCGCCAATGACGGC
GTCGCGGCGTCCCCGGCGGAACACGCGGCCTGA

Upstream 100 bases:

>100_bases
ACGGGAACGCCATCCGGGTTCCCGCCAGCCAGGCACAGCCCGCTCGCCGAGGGGTATCGCGTTGCCTGCTGACATAGACC
TTGCTGTTGAGGAGGTTGAC

Downstream 100 bases:

>100_bases
TCGCGGCCAACACGTTGCATTCAGACCATGAAAGGGGGTCGGACCGCTGGTCCGACCCCTTTTTTCGCGGTCCCGAGCGC
CCCTGCCTTCCTGCACCCTT

Product: small heat shock protein ibpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTYDFAPLFRTAIGFDRLARLVDNAAQNPAVPSYPPYNIERLGDGSYVLTMAVAGFGPDDIDLTVQDNMLVVTGRVASTA
PAGELLHRGIATRAFDRRFALADHILVEGADLTNGLLRITVKHVVPEALKPRRIPITTASPAVAPPAEPERVEAPAANDG
VAASPAEHAA

Sequences:

>Translated_170_residues
MTYDFAPLFRTAIGFDRLARLVDNAAQNPAVPSYPPYNIERLGDGSYVLTMAVAGFGPDDIDLTVQDNMLVVTGRVASTA
PAGELLHRGIATRAFDRRFALADHILVEGADLTNGLLRITVKHVVPEALKPRRIPITTASPAVAPPAEPERVEAPAANDG
VAASPAEHAA
>Mature_169_residues
TYDFAPLFRTAIGFDRLARLVDNAAQNPAVPSYPPYNIERLGDGSYVLTMAVAGFGPDDIDLTVQDNMLVVTGRVASTAP
AGELLHRGIATRAFDRRFALADHILVEGADLTNGLLRITVKHVVPEALKPRRIPITTASPAVAPPAEPERVEAPAANDGV
AASPAEHAA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=136, Percent_Identity=47.0588235294118, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI87082316, Length=136, Percent_Identity=36.7647058823529, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18018; Mature: 17886

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYDFAPLFRTAIGFDRLARLVDNAAQNPAVPSYPPYNIERLGDGSYVLTMAVAGFGPDD
CCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCC
IDLTVQDNMLVVTGRVASTAPAGELLHRGIATRAFDRRFALADHILVEGADLTNGLLRIT
EEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHEEH
VKHVVPEALKPRRIPITTASPAVAPPAEPERVEAPAANDGVAASPAEHAA
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
TYDFAPLFRTAIGFDRLARLVDNAAQNPAVPSYPPYNIERLGDGSYVLTMAVAGFGPDD
CCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCC
IDLTVQDNMLVVTGRVASTAPAGELLHRGIATRAFDRRFALADHILVEGADLTNGLLRIT
EEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHEEH
VKHVVPEALKPRRIPITTASPAVAPPAEPERVEAPAANDGVAASPAEHAA
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]