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The map label for this gene is acoR [H]

Identifier: 162147507

GI number: 162147507

Start: 1746517

End: 1747500

Strand: Direct

Name: acoR [H]

Synonym: GDI_1723

Alternate gene names: 162147507

Gene position: 1746517-1747500 (Clockwise)

Preceding gene: 162147503

Following gene: 162147511

Centisome position: 44.28

GC content: 70.53

Gene sequence:

>984_bases
ATGATATCGATTCACAGGGACAGCGCCGGAGGTCACCCGGCGATCGGTCGGACCATGGGCATGGCGCCGGCAACGGGACA
GACGATCCTGGCGGCATCCTGGCGGCGCTGCATGGGCGATTACGCACTGGACCCGTCAGGCTGGGGCCAGCCGGACCTGT
TGTCCTGCGTCGAACTGCGCCAGTCCTGCGACAAGGCTGGGCCGCTTCTGCGTTTCGCGGACCCGGAACTGGACCGGCTG
CACGCCGTGGTGGGCAGCCTGGATTACGCGGTGCTGCTGGCCGATTCGACCGGGATCGTGCTGACGCGCCGCACCGCGCA
GACCGTCGAGCGCGGGTGCCGGCGCTGGCACCTCTGGCCCGGTGCCAGTTGGAACGAGCGCGACGAAGGCACGAACGGCA
TCGGCACCTGCCTGGCCGAAGGGCGCGCGGTGACGGTGCATATGAACCAGCACTGGCGGGTGAATCTGCGCTACCTGACC
TGCAGCGCCGTGCCCGTCTATGACGCGCTGGGGCGGCTGGCCGGGGCGCTGGACGCCAGTTCGTTCCGGCCCGACCCCGA
TGGGCGCGAGGTCGCGCTGATCCGCATCGCGATCACCGAGGCGGCGCGGCGCATCGAGGCACGCTGCTTCACCGACCTGT
ATCGCGGGCAGATGATCGTCAGGATGGGCGAGGGGGACGAGGGCGAGGAGGGCGACGGCAGTTCCGCGCCCATGCTGGCG
CTGGATTCCGACCGCCGGGTGGTGGGCGCCACCCAGGCGGCGCGGCGCCGGATGGGGCTGGCGCCGGGGGACGACCTGCA
ATTCTGTCTGATGGACGGTGCCATGAGCGGCGTATCCGGCTTTCGCGAGGCGGAAAAGGCGGTGGTTGATGCCGCCCTGG
CCTCGGCGCGCGGCAATGTCAGCGCGGCGGCGCGGCAACTGGGGATCAGCCGGTCAACCCTGCACCGGAAGATCCGCGCC
CTGTCGGGTGGCGAGGACGCCTAA

Upstream 100 bases:

>100_bases
AATAACGGATATGTGACGCCGCGCGTCCGAACTGTCGCGGGACTGCTACAGGTCGGGCGGTTTAGAAAGGGCGACCGCAA
TAACCGTTCGGAAGAGACGG

Downstream 100 bases:

>100_bases
AGTCTTGGCGGCCTGCTGATCTCCGAAATTCATCTATGAATTTCGAAGGCAGGGCGCCAGCGCCGCGTTTACCCCGAATT
CGCCCGGCAGGCCGCCATGG

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MISIHRDSAGGHPAIGRTMGMAPATGQTILAASWRRCMGDYALDPSGWGQPDLLSCVELRQSCDKAGPLLRFADPELDRL
HAVVGSLDYAVLLADSTGIVLTRRTAQTVERGCRRWHLWPGASWNERDEGTNGIGTCLAEGRAVTVHMNQHWRVNLRYLT
CSAVPVYDALGRLAGALDASSFRPDPDGREVALIRIAITEAARRIEARCFTDLYRGQMIVRMGEGDEGEEGDGSSAPMLA
LDSDRRVVGATQAARRRMGLAPGDDLQFCLMDGAMSGVSGFREAEKAVVDAALASARGNVSAAARQLGISRSTLHRKIRA
LSGGEDA

Sequences:

>Translated_327_residues
MISIHRDSAGGHPAIGRTMGMAPATGQTILAASWRRCMGDYALDPSGWGQPDLLSCVELRQSCDKAGPLLRFADPELDRL
HAVVGSLDYAVLLADSTGIVLTRRTAQTVERGCRRWHLWPGASWNERDEGTNGIGTCLAEGRAVTVHMNQHWRVNLRYLT
CSAVPVYDALGRLAGALDASSFRPDPDGREVALIRIAITEAARRIEARCFTDLYRGQMIVRMGEGDEGEEGDGSSAPMLA
LDSDRRVVGATQAARRRMGLAPGDDLQFCLMDGAMSGVSGFREAEKAVVDAALASARGNVSAAARQLGISRSTLHRKIRA
LSGGEDA
>Mature_327_residues
MISIHRDSAGGHPAIGRTMGMAPATGQTILAASWRRCMGDYALDPSGWGQPDLLSCVELRQSCDKAGPLLRFADPELDRL
HAVVGSLDYAVLLADSTGIVLTRRTAQTVERGCRRWHLWPGASWNERDEGTNGIGTCLAEGRAVTVHMNQHWRVNLRYLT
CSAVPVYDALGRLAGALDASSFRPDPDGREVALIRIAITEAARRIEARCFTDLYRGQMIVRMGEGDEGEEGDGSSAPMLA
LDSDRRVVGATQAARRRMGLAPGDDLQFCLMDGAMSGVSGFREAEKAVVDAALASARGNVSAAARQLGISRSTLHRKIRA
LSGGEDA

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 35116; Mature: 35116

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIHRDSAGGHPAIGRTMGMAPATGQTILAASWRRCMGDYALDPSGWGQPDLLSCVELR
CEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
QSCDKAGPLLRFADPELDRLHAVVGSLDYAVLLADSTGIVLTRRTAQTVERGCRRWHLWP
HHHHHHCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHEEECCC
GASWNERDEGTNGIGTCLAEGRAVTVHMNQHWRVNLRYLTCSAVPVYDALGRLAGALDAS
CCCCCCCCCCCCCHHHHHCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHCCCC
SFRPDPDGREVALIRIAITEAARRIEARCFTDLYRGQMIVRMGEGDEGEEGDGSSAPMLA
CCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEE
LDSDRRVVGATQAARRRMGLAPGDDLQFCLMDGAMSGVSGFREAEKAVVDAALASARGNV
ECCCCCEEHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SAAARQLGISRSTLHRKIRALSGGEDA
HHHHHHHCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MISIHRDSAGGHPAIGRTMGMAPATGQTILAASWRRCMGDYALDPSGWGQPDLLSCVELR
CEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
QSCDKAGPLLRFADPELDRLHAVVGSLDYAVLLADSTGIVLTRRTAQTVERGCRRWHLWP
HHHHHHCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHEEECCC
GASWNERDEGTNGIGTCLAEGRAVTVHMNQHWRVNLRYLTCSAVPVYDALGRLAGALDAS
CCCCCCCCCCCCCHHHHHCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHCCCC
SFRPDPDGREVALIRIAITEAARRIEARCFTDLYRGQMIVRMGEGDEGEEGDGSSAPMLA
CCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEE
LDSDRRVVGATQAARRRMGLAPGDDLQFCLMDGAMSGVSGFREAEKAVVDAALASARGNV
ECCCCCEEHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SAAARQLGISRSTLHRKIRALSGGEDA
HHHHHHHCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]