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The map label for this gene is flgC [H]

Identifier: 162147439

GI number: 162147439

Start: 1677507

End: 1677914

Strand: Direct

Name: flgC [H]

Synonym: GDI_1655

Alternate gene names: 162147439

Gene position: 1677507-1677914 (Clockwise)

Preceding gene: 162147438

Following gene: 162147441

Centisome position: 42.53

GC content: 59.56

Gene sequence:

>408_bases
ATGGATTTCTCGGACACCATAGGGGTATCCGCCGCCGGGATGCGCGCGCAGGAAGAGCGGCTGCGGGTCGCGGCTGAAAA
CCTTGCCAACAAGGACACGACGGGCTCGACCCGCGGTGCCGATCCCTATCGTCGCAAGACCATTACGTTCCAGGCGACGC
TGGACCAGGCTTCCGGCGTCTCCAGCGTGAAGGTCAAAGGGATCGGGCAGGATAATACGCCCTTCCAGACGAAGTACGAC
CCGTCACACCCGGCGGCGGATGCCAATGGCTACGTGAAGATGCCGAATGTGAATTCGATGGTCGAGATCATGGACACGCA
CGAAGCACAGCATTCGTACGAGGCCAATCTGAACACCATGCAGATCTCCCGTTCGATGGCGACGCGCACCATCAACCTCA
TAAAGTAG

Upstream 100 bases:

>100_bases
GACCAGCAGCGTTTCGCGACGAACGTGTACAGCCTGTATATGTCGATGTACTCGACCGCCCTGGGCACGGGCGGATCGAC
TTCGTAGGCGGGAGGCAACC

Downstream 100 bases:

>100_bases
GAAAGCCTCGGTACCGCAATCCGCGGACGGCGGCCGGGTCGGCAATCCGGGGCCGGGAGGAAGCATTGCTTGCCGTGCGA
TCAGGCTGGCAGGCGCGATA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGIGQDNTPFQTKYD
PSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMATRTINLIK

Sequences:

>Translated_135_residues
MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGIGQDNTPFQTKYD
PSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMATRTINLIK
>Mature_135_residues
MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGIGQDNTPFQTKYD
PSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMATRTINLIK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=133, Percent_Identity=36.8421052631579, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14755; Mature: 14755

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCC
SSVKVKGIGQDNTPFQTKYDPSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNTM
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHCCCCCHH
QISRSMATRTINLIK
HHHHHHHHHEEEECC
>Mature Secondary Structure
MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCC
SSVKVKGIGQDNTPFQTKYDPSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNTM
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHCCCCCHH
QISRSMATRTINLIK
HHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]