Click here to switch to the map view.

The map label for this gene is 162147432

Identifier: 162147432

GI number: 162147432

Start: 1672579

End: 1673541

Strand: Reverse

Name: 162147432

Synonym: GDI_1648

Alternate gene names: NA

Gene position: 1673541-1672579 (Counterclockwise)

Preceding gene: 162147437

Following gene: 162147429

Centisome position: 42.43

GC content: 65.42

Gene sequence:

>963_bases
ATGGCCATGGCCATCCTCTGTTCCATGCCGGGACGGATCGCCGGCAAAAAAACATTCATGGTTGCGCGGAATTTGGATAT
GGAGATCGGAATGGACGCCATGCCGATCCCTTGCCTGCGTCGCCGGTCCCGCATGGCTCTTATCACGACTGCCATTCTGG
TCCATCCGGTATGGAACGCTTCTGCCCGCTCGCCGCAGGCTTCGCTGTGCGTGGAGGCGACGACACAGGCCGAGCGGGCA
CTGCATATCCCCGATGGATTCCTTGCCGCGATGAGCCGGGTCGAAAGCGGAAGGCCGGAACCGGACGGCATGATCTCCGC
GTGGCCCTGGACCATCACCGTCAACGGGGTCGGGCATTACTACATGACCCGCGAAGACGCCATCGCCGCCGTCCAGATGT
TCCGCCAGCAGGGAAACCCGTCGATCGATGTCGGCTGCATGCAGGTCAACCTCCAGCAGCATCCGGACGCTTTTTCCACC
CTGGATCAGGCTTTCGATCCTGTTCGCAACGCGCGCTACGCCGCCACCTTTCTCCTGAAATTGCACGACAAGATGGGCAG
TTGGCCCCGGGCGGCGGCGGCCTATCATTCGCAGACGCCCGGCATCGGCACGCCCTATCAATGGAAGGTGCTGGAGGCAT
GGGCTGTTCCGCAGGACGGGCGCGACCCGCAGATATCGCCCCGAAAGGACGCCCGGGCCGCGCCCTATTTCGCGGCACAG
ACCTTCCCCCGTCCGCTTGTCCCCGCCTTGGCGCCGCACCAGCCCGTCATGGCGGCGGCACCGGCCGGAATGACGACGAC
GCCGGTCAGGGCGTTCCATCCCTTCGTCGGCAACAGGAATTTTGCCCCACCGTCTCCGAACAGGCCGGTCACGAAAGGCA
CGCAGGGACGGACGCTGGCCTCATACCGCGCAGCCCCCGTGGCCCTGGTCGCGCCGCGGCGGCTGGCGCCACAGCCGGGT
TAG

Upstream 100 bases:

>100_bases
ATTCCTCATAGAACTGGTCACCCTTGCGTTTCAGCCCATGACTTTCCGAGGACAGGCCACAGCTTCGCGGCAAGGATACG
CGCCCACGCCATGACATTCA

Downstream 100 bases:

>100_bases
CACCCTGCGTTCCAGGCGGTCACCCAATCCCGCAGGGCCGCGCCGACTTCACGCAGGACGGGGGCGAGGGATCTTTCCCG
CGCACGGAACAGGCGCATGG

Product: transglycosylase

Products: NA

Alternate protein names: Transglycosylase Slt Family; Lytic Transglycosylase; Transglycosylase; Transglycosylase SLT Domain-Containing Protein; Soluble Lytic Murein Transglycosylase; Transglycosylase SLT Family Protein; Slt Family Transglycosylase; Transglycosylase SLT Domain; VirB1 Protein; Type IV Secretory Pathway Lytic Transglycosylase; Lytic Murein Transglycosylase Family Protein

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MAMAILCSMPGRIAGKKTFMVARNLDMEIGMDAMPIPCLRRRSRMALITTAILVHPVWNASARSPQASLCVEATTQAERA
LHIPDGFLAAMSRVESGRPEPDGMISAWPWTITVNGVGHYYMTREDAIAAVQMFRQQGNPSIDVGCMQVNLQQHPDAFST
LDQAFDPVRNARYAATFLLKLHDKMGSWPRAAAAYHSQTPGIGTPYQWKVLEAWAVPQDGRDPQISPRKDARAAPYFAAQ
TFPRPLVPALAPHQPVMAAAPAGMTTTPVRAFHPFVGNRNFAPPSPNRPVTKGTQGRTLASYRAAPVALVAPRRLAPQPG

Sequences:

>Translated_320_residues
MAMAILCSMPGRIAGKKTFMVARNLDMEIGMDAMPIPCLRRRSRMALITTAILVHPVWNASARSPQASLCVEATTQAERA
LHIPDGFLAAMSRVESGRPEPDGMISAWPWTITVNGVGHYYMTREDAIAAVQMFRQQGNPSIDVGCMQVNLQQHPDAFST
LDQAFDPVRNARYAATFLLKLHDKMGSWPRAAAAYHSQTPGIGTPYQWKVLEAWAVPQDGRDPQISPRKDARAAPYFAAQ
TFPRPLVPALAPHQPVMAAAPAGMTTTPVRAFHPFVGNRNFAPPSPNRPVTKGTQGRTLASYRAAPVALVAPRRLAPQPG
>Mature_319_residues
AMAILCSMPGRIAGKKTFMVARNLDMEIGMDAMPIPCLRRRSRMALITTAILVHPVWNASARSPQASLCVEATTQAERAL
HIPDGFLAAMSRVESGRPEPDGMISAWPWTITVNGVGHYYMTREDAIAAVQMFRQQGNPSIDVGCMQVNLQQHPDAFSTL
DQAFDPVRNARYAATFLLKLHDKMGSWPRAAAAYHSQTPGIGTPYQWKVLEAWAVPQDGRDPQISPRKDARAAPYFAAQT
FPRPLVPALAPHQPVMAAAPAGMTTTPVRAFHPFVGNRNFAPPSPNRPVTKGTQGRTLASYRAAPVALVAPRRLAPQPG

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34866; Mature: 34734

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMAILCSMPGRIAGKKTFMVARNLDMEIGMDAMPIPCLRRRSRMALITTAILVHPVWNA
CCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCC
SARSPQASLCVEATTQAERALHIPDGFLAAMSRVESGRPEPDGMISAWPWTITVNGVGHY
CCCCCCHHEEEEEHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCCCEE
YMTREDAIAAVQMFRQQGNPSIDVGCMQVNLQQHPDAFSTLDQAFDPVRNARYAATFLLK
EEEHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH
LHDKMGSWPRAAAAYHSQTPGIGTPYQWKVLEAWAVPQDGRDPQISPRKDARAAPYFAAQ
HHHHHCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
TFPRPLVPALAPHQPVMAAAPAGMTTTPVRAFHPFVGNRNFAPPSPNRPVTKGTQGRTLA
CCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEH
SYRAAPVALVAPRRLAPQPG
HHCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
AMAILCSMPGRIAGKKTFMVARNLDMEIGMDAMPIPCLRRRSRMALITTAILVHPVWNA
CEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCC
SARSPQASLCVEATTQAERALHIPDGFLAAMSRVESGRPEPDGMISAWPWTITVNGVGHY
CCCCCCHHEEEEEHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCCCEE
YMTREDAIAAVQMFRQQGNPSIDVGCMQVNLQQHPDAFSTLDQAFDPVRNARYAATFLLK
EEEHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH
LHDKMGSWPRAAAAYHSQTPGIGTPYQWKVLEAWAVPQDGRDPQISPRKDARAAPYFAAQ
HHHHHCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
TFPRPLVPALAPHQPVMAAAPAGMTTTPVRAFHPFVGNRNFAPPSPNRPVTKGTQGRTLA
CCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEH
SYRAAPVALVAPRRLAPQPG
HHCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA