| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is cusC [H]
Identifier: 162147390
GI number: 162147390
Start: 1606624
End: 1608147
Strand: Direct
Name: cusC [H]
Synonym: GDI_1605
Alternate gene names: 162147390
Gene position: 1606624-1608147 (Clockwise)
Preceding gene: 162147389
Following gene: 162147391
Centisome position: 40.73
GC content: 70.28
Gene sequence:
>1524_bases ATGAGCATGAAGACGAGACGCACATTCCACCGGGCCGGGCTGATGCTGCTGGCCGCCACGATGCTGGCGGGGTGCACGGT GGGGCCGCGCTACCAGCCGGACCGGATGAAGCTGCCGCCGGGCTTTGCCGAGGACGAGCATGCCGCGACGCCGGCGGAAA TCGCCCGCACCAATGCCGAGCTGAAGGACTGGTGGCACCGCTTCGGCGACGCCGAGCTGGACCGGCTGGTCGACCGGGCG ATCGCGGGCAATTACGACCTGCAGATCGCCGGCCAGCGCATCCTGGCCGAGCGCGCGCTGCGCGACGTCCAGGCCTCCGC CTGGTATCCGCAGGTCGATGCCAACACCACCGACGGTGACAGCCGCTATTCCATCAACGTGGACAACTGGCCGCTGCGCC CGGGCAATCCGGCCAACCGGCCGGGGGCGTCGTACCTGTCCTACGGCGTCAGCGCCAGCTGGCAGATCGACGTGTTCGGC CGCATCCGCCGCGCGGTCGAGGCCTCGGAACACGCGGTCGAGGAGAATGTCGAGGAACGGCGCGCGGTGCTGATGACCAT GCTGTCGTCGCTGGTCAGCGACTACATGGTGCTGCGCGACACCCAGCTGCGGCTGGAGATCTCGAACCGCAACATCGGGG TGGCGCAGGAAGCCTACGACCTGACGCGGCGGCTGTATCTGGAGGGCGTGGGCAACACGCTGCAGATCGCCCAGGCGAAG GCCGAGCTGGACGCCCAGCAGGCGGCGCGCGAGCCGCTGCGCACCCATATCGCGCAGATCACCCACGCCATCGACGTGCT GATGGGCCAGGTGCCCGGCACCACCGAGGCCGAACTGAAGGTGGCGCGGCCGCTGCCCCAGGTGCCGGAATTCCCGGCGA CGGTGCCCTCGATCGTGCTGGGCAACCGGCCCGACATCCGCCGCGCCGAGCGCGCCTATGCCGAGGCGACGGCGCGGATC GGGGTGGCGGTGGCGCAGATGTATCCGAATTTCGCCATTCCGCTGAACTTCAACCCCAACGCGTCGGCGATGTACCAGGT GTTCGAGGCCGGGGCGCTGAGCTGGCAGTTCTTCATGCTGGCGTCGCTGCCGCTGATGCATGGCGGCAAGCTGACCGGGC AGATCCGCGCCGCCCAGGCGGCGGCGGAAGCCAGCCGCCTGACCTACCGCCAGACGGTGCTGGGCGCGTTCCGCGAGGTC GAGGACGCGATGGCGGCGTGGCATGACGACGTGGAGCACACCGAACTGCTGCACCGCGCCGCCGAGGACAGCCGGCTGGC CAGCGACCGGGCGCGCAAGCTGTATGCCGCCGGGCTGGTGGGCTTCCTGGAGGTGCTGACCACCGAGCGCACCGCCCTGG CCGCCGAGAACGCCGAGGCCGTGGCGCGGCTGGAACGCCTGCAGGATGCCATCGACCTCTATACCGCCATGGGTGCCGGC TGGCAGGGCGTGGGGGTGACCGCCTCCGCCCTGCCGGTGTCGCTGGAGAAGCAGAACGTCCTGGCGCGGGCGTTCCAGGA TTGA
Upstream 100 bases:
>100_bases GGCATGACCTGCACCGTCACCGTCGGCCCGCAGTCGCGCGGCCAGCGGGGGCGCCTGACCACCTGGCTGCAAGACCATCT ATAAGGCCCCCCGCGCGATC
Downstream 100 bases:
>100_bases GGAGGGGCGTTCTTTTTTGAAAAAAAGAACCAAAAAACTTTGATTCGTCTGGGGACCATGTGCCGGAGACATACGACGCC CCAAAACGGATAAAAGTCTT
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSMKTRRTFHRAGLMLLAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIARTNAELKDWWHRFGDAELDRLVDRA IAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGDSRYSINVDNWPLRPGNPANRPGASYLSYGVSASWQIDVFG RIRRAVEASEHAVEENVEERRAVLMTMLSSLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAK AELDAQQAAREPLRTHIAQITHAIDVLMGQVPGTTEAELKVARPLPQVPEFPATVPSIVLGNRPDIRRAERAYAEATARI GVAVAQMYPNFAIPLNFNPNASAMYQVFEAGALSWQFFMLASLPLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREV EDAMAAWHDDVEHTELLHRAAEDSRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAG WQGVGVTASALPVSLEKQNVLARAFQD
Sequences:
>Translated_507_residues MSMKTRRTFHRAGLMLLAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIARTNAELKDWWHRFGDAELDRLVDRA IAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGDSRYSINVDNWPLRPGNPANRPGASYLSYGVSASWQIDVFG RIRRAVEASEHAVEENVEERRAVLMTMLSSLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAK AELDAQQAAREPLRTHIAQITHAIDVLMGQVPGTTEAELKVARPLPQVPEFPATVPSIVLGNRPDIRRAERAYAEATARI GVAVAQMYPNFAIPLNFNPNASAMYQVFEAGALSWQFFMLASLPLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREV EDAMAAWHDDVEHTELLHRAAEDSRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAG WQGVGVTASALPVSLEKQNVLARAFQD >Mature_506_residues SMKTRRTFHRAGLMLLAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIARTNAELKDWWHRFGDAELDRLVDRAI AGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGDSRYSINVDNWPLRPGNPANRPGASYLSYGVSASWQIDVFGR IRRAVEASEHAVEENVEERRAVLMTMLSSLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAKA ELDAQQAAREPLRTHIAQITHAIDVLMGQVPGTTEAELKVARPLPQVPEFPATVPSIVLGNRPDIRRAERAYAEATARIG VAVAQMYPNFAIPLNFNPNASAMYQVFEAGALSWQFFMLASLPLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREVE DAMAAWHDDVEHTELLHRAAEDSRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAGW QGVGVTASALPVSLEKQNVLARAFQD
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=467, Percent_Identity=27.1948608137045, Blast_Score=171, Evalue=9e-44, Organism=Escherichia coli, GI2367348, Length=482, Percent_Identity=24.0663900414938, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 55889; Mature: 55758
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKTRRTFHRAGLMLLAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIARTNAE CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH LKDWWHRFGDAELDRLVDRAIAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGD HHHHHHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SRYSINVDNWPLRPGNPANRPGASYLSYGVSASWQIDVFGRIRRAVEASEHAVEENVEER CEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RAVLMTMLSSLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAK HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH AELDAQQAAREPLRTHIAQITHAIDVLMGQVPGTTEAELKVARPLPQVPEFPATVPSIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHC GNRPDIRRAERAYAEATARIGVAVAQMYPNFAIPLNFNPNASAMYQVFEAGALSWQFFML CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH ASLPLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREVEDAMAAWHDDVEHTELLHRA HHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEDSRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC WQGVGVTASALPVSLEKQNVLARAFQD CCCCCCCHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure SMKTRRTFHRAGLMLLAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIARTNAE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH LKDWWHRFGDAELDRLVDRAIAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGD HHHHHHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SRYSINVDNWPLRPGNPANRPGASYLSYGVSASWQIDVFGRIRRAVEASEHAVEENVEER CEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RAVLMTMLSSLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAK HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH AELDAQQAAREPLRTHIAQITHAIDVLMGQVPGTTEAELKVARPLPQVPEFPATVPSIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHC GNRPDIRRAERAYAEATARIGVAVAQMYPNFAIPLNFNPNASAMYQVFEAGALSWQFFML CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH ASLPLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREVEDAMAAWHDDVEHTELLHRA HHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEDSRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC WQGVGVTASALPVSLEKQNVLARAFQD CCCCCCCHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]