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The map label for this gene is istA [H]

Identifier: 162147375

GI number: 162147375

Start: 1592242

End: 1593774

Strand: Direct

Name: istA [H]

Synonym: GDI_1589

Alternate gene names: 162147375

Gene position: 1592242-1593774 (Clockwise)

Preceding gene: 162147374

Following gene: 162147376

Centisome position: 40.37

GC content: 63.21

Gene sequence:

>1533_bases
GTGATCAGCATGGAATTGTTGAGTGTGATCCGGCGGTGGCATTACCGGGATCATGTACCGATCCGCGAGATTGAGCGTCG
GACGCGATTGTCGCGCAACACGATCCGCAAGTATCTCCGGGCGGAGACGGTTGAGCCGCAGTTCAAGGTTGCCGAGCGTC
CGAGCCGGCTGGACCCGTTTGCGGAGAAACTGGCGACCTGGCTTGCTCTGGAGACGTCAAAGTCGCGCAAGCAGCGCCGC
ACGGGGCGGCGCCTGCATGTGGATCTTGTAGCGCTGGGTTATGACGGATCGTATGGACGGGTTGCGGCCTTTATCCGGAA
CTGGAAGGCGGAACAGCAAAGGGCGCGGCAGACGACGGGACGCGGCGTGTTCGTTCCGTTGCGCTTTCAACCCGGAGAGG
CCTTCCAGTTCGACTGGGGAGAGGACTGGGCGGTGATCGGGGGGCGGCGCGTCAAGCTGCAGGTCGCCCACACCAAGCTG
TCCTACAGCCGGGCCTTCATTCTGCGGGCGTATCCGCTCCAGACTCACGAGATGCTGTTCGACGCGCTGACGGAAGCCTT
TCGCGTTTTGGGCGGGGTGCCGCGTCGAGGTATTTTTGACAATATGAAAACCGCCGTGGACCGGGTTGGGCCCGGCAAGG
TCCGCCAGGTCAATCTGCGTTTTTCGGCCCTGGTGAGCCATTATCTGTTCGAGGCGGAGTTCTGCAATCCGGCAGCGGGT
TGGGAGAAAGGTCAAATCGAGAAGACCGTCCAGGACGCCCGGCGGCAGATCTGGCAGGAGATGCCGCATTTTCCTGATCT
GGCCTCCCTGAACGTCTGGCTCGAGGCGCGTTGCCGGGAACGTTGGACTATCTTGAGGCATGTCGAATTGCCCGGCAGCC
TCGCCGAGGCCCATGCGGCGGAAGTGCCTCACCTGATGGTTCCAGGGCGCCCGTTCGACGGGTTCGTCGAACATACCAAA
CGGGTTTCGCCGACTTGCCTCGTGCAGTTCGAAAGCAACCGCTACAGTGTGCCCGCCTCTTTTGCCAATCGGCCGGTCAG
CCTGCGCGTCTATCCCGACCGGTTGGTGATCGCGGCCGAGGGGCGGATCCTATGCGAACATCCCCGGATCGTCGAGCGGT
CCCACGGCGTGCCCGGTCGCACGATCTATGACTGGCGGCATTACTTGGCGGTGCTCCAGCGCAAACCCGGGGCCTTGCGC
AATGGCGCACCCTTCTCTGAATTGCCCGAGGCGTTCCGGACGCTGCAGACGCACCTCCTCCGGCGCACGGGCGGCGACCG
GGAAATGGTCGAGATCCTCGCCCTGGTGCTGCAGCATGATGAGCAGGCCGTGCTTTGCGCGGTTGAACTCGCGCTCGAGG
AGGGAGTAGCCACCAAGACACACGTCCTCAATACGTTGCATCGTCTGACGGACGCCAAGAAAACAGGAGCACCCAGGCTC
GACGCGCCGCAGGCATTGGTGCTCGAACGCGAGCCTCAGGCCGATACCGGACGGTATGACGCCCTGCGCGGGGAGGCCCG
TCATGCGTCATGA

Upstream 100 bases:

>100_bases
TGATTTCCAGCGAGAACTGACCCTGTAGGGGCGGAAATTTTCATTGAGAATTGACCCGTGTCTGACACTTCCCCGGAGCA
ACTGTCCGGGGGTTAAAGGA

Downstream 100 bases:

>100_bases
TCCCGCGGCCGGTGCCCTCGTCGTCATGCTGCGCGGCCTGCGGATGTATGGCATGGCCCAGGCCACGGCCGAACTGACCG
AACAGGGTGCGCCGGCATTC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MISMELLSVIRRWHYRDHVPIREIERRTRLSRNTIRKYLRAETVEPQFKVAERPSRLDPFAEKLATWLALETSKSRKQRR
TGRRLHVDLVALGYDGSYGRVAAFIRNWKAEQQRARQTTGRGVFVPLRFQPGEAFQFDWGEDWAVIGGRRVKLQVAHTKL
SYSRAFILRAYPLQTHEMLFDALTEAFRVLGGVPRRGIFDNMKTAVDRVGPGKVRQVNLRFSALVSHYLFEAEFCNPAAG
WEKGQIEKTVQDARRQIWQEMPHFPDLASLNVWLEARCRERWTILRHVELPGSLAEAHAAEVPHLMVPGRPFDGFVEHTK
RVSPTCLVQFESNRYSVPASFANRPVSLRVYPDRLVIAAEGRILCEHPRIVERSHGVPGRTIYDWRHYLAVLQRKPGALR
NGAPFSELPEAFRTLQTHLLRRTGGDREMVEILALVLQHDEQAVLCAVELALEEGVATKTHVLNTLHRLTDAKKTGAPRL
DAPQALVLEREPQADTGRYDALRGEARHAS

Sequences:

>Translated_510_residues
MISMELLSVIRRWHYRDHVPIREIERRTRLSRNTIRKYLRAETVEPQFKVAERPSRLDPFAEKLATWLALETSKSRKQRR
TGRRLHVDLVALGYDGSYGRVAAFIRNWKAEQQRARQTTGRGVFVPLRFQPGEAFQFDWGEDWAVIGGRRVKLQVAHTKL
SYSRAFILRAYPLQTHEMLFDALTEAFRVLGGVPRRGIFDNMKTAVDRVGPGKVRQVNLRFSALVSHYLFEAEFCNPAAG
WEKGQIEKTVQDARRQIWQEMPHFPDLASLNVWLEARCRERWTILRHVELPGSLAEAHAAEVPHLMVPGRPFDGFVEHTK
RVSPTCLVQFESNRYSVPASFANRPVSLRVYPDRLVIAAEGRILCEHPRIVERSHGVPGRTIYDWRHYLAVLQRKPGALR
NGAPFSELPEAFRTLQTHLLRRTGGDREMVEILALVLQHDEQAVLCAVELALEEGVATKTHVLNTLHRLTDAKKTGAPRL
DAPQALVLEREPQADTGRYDALRGEARHAS
>Mature_510_residues
MISMELLSVIRRWHYRDHVPIREIERRTRLSRNTIRKYLRAETVEPQFKVAERPSRLDPFAEKLATWLALETSKSRKQRR
TGRRLHVDLVALGYDGSYGRVAAFIRNWKAEQQRARQTTGRGVFVPLRFQPGEAFQFDWGEDWAVIGGRRVKLQVAHTKL
SYSRAFILRAYPLQTHEMLFDALTEAFRVLGGVPRRGIFDNMKTAVDRVGPGKVRQVNLRFSALVSHYLFEAEFCNPAAG
WEKGQIEKTVQDARRQIWQEMPHFPDLASLNVWLEARCRERWTILRHVELPGSLAEAHAAEVPHLMVPGRPFDGFVEHTK
RVSPTCLVQFESNRYSVPASFANRPVSLRVYPDRLVIAAEGRILCEHPRIVERSHGVPGRTIYDWRHYLAVLQRKPGALR
NGAPFSELPEAFRTLQTHLLRRTGGDREMVEILALVLQHDEQAVLCAVELALEEGVATKTHVLNTLHRLTDAKKTGAPRL
DAPQALVLEREPQADTGRYDALRGEARHAS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 58486; Mature: 58486

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMELLSVIRRWHYRDHVPIREIERRTRLSRNTIRKYLRAETVEPQFKVAERPSRLDPF
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHH
AEKLATWLALETSKSRKQRRTGRRLHVDLVALGYDGSYGRVAAFIRNWKAEQQRARQTTG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
RGVFVPLRFQPGEAFQFDWGEDWAVIGGRRVKLQVAHTKLSYSRAFILRAYPLQTHEMLF
CEEEEEEEECCCCCEECCCCCCEEEECCEEEEEEEEEEHHHHHHEEEEEECCCCHHHHHH
DALTEAFRVLGGVPRRGIFDNMKTAVDRVGPGKVRQVNLRFSALVSHYLFEAEFCNPAAG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC
WEKGQIEKTVQDARRQIWQEMPHFPDLASLNVWLEARCRERWTILRHVELPGSLAEAHAA
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
EVPHLMVPGRPFDGFVEHTKRVSPTCLVQFESNRYSVPASFANRPVSLRVYPDRLVIAAE
CCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCCEECCHHHCCCCEEEEEECCEEEEEEC
GRILCEHPRIVERSHGVPGRTIYDWRHYLAVLQRKPGALRNGAPFSELPEAFRTLQTHLL
CCEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
RRTGGDREMVEILALVLQHDEQAVLCAVELALEEGVATKTHVLNTLHRLTDAKKTGAPRL
HHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
DAPQALVLEREPQADTGRYDALRGEARHAS
CCCCEEEEECCCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MISMELLSVIRRWHYRDHVPIREIERRTRLSRNTIRKYLRAETVEPQFKVAERPSRLDPF
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHH
AEKLATWLALETSKSRKQRRTGRRLHVDLVALGYDGSYGRVAAFIRNWKAEQQRARQTTG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
RGVFVPLRFQPGEAFQFDWGEDWAVIGGRRVKLQVAHTKLSYSRAFILRAYPLQTHEMLF
CEEEEEEEECCCCCEECCCCCCEEEECCEEEEEEEEEEHHHHHHEEEEEECCCCHHHHHH
DALTEAFRVLGGVPRRGIFDNMKTAVDRVGPGKVRQVNLRFSALVSHYLFEAEFCNPAAG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC
WEKGQIEKTVQDARRQIWQEMPHFPDLASLNVWLEARCRERWTILRHVELPGSLAEAHAA
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
EVPHLMVPGRPFDGFVEHTKRVSPTCLVQFESNRYSVPASFANRPVSLRVYPDRLVIAAE
CCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCCEECCHHHCCCCEEEEEECCEEEEEEC
GRILCEHPRIVERSHGVPGRTIYDWRHYLAVLQRKPGALRNGAPFSELPEAFRTLQTHLL
CCEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
RRTGGDREMVEILALVLQHDEQAVLCAVELALEEGVATKTHVLNTLHRLTDAKKTGAPRL
HHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
DAPQALVLEREPQADTGRYDALRGEARHAS
CCCCEEEEECCCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]