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The map label for this gene is yagA [C]

Identifier: 162147362

GI number: 162147362

Start: 1578890

End: 1579882

Strand: Direct

Name: yagA [C]

Synonym: GDI_1576

Alternate gene names: 162147362

Gene position: 1578890-1579882 (Clockwise)

Preceding gene: 162147361

Following gene: 162147368

Centisome position: 40.03

GC content: 56.7

Gene sequence:

>993_bases
ATGGGCCAGGTTCACCACGGAAGCGCCACGACGACAGCGGCAGTCCGTCGAGCGATACAACATAGTCAAGAGAGCCTGAG
GGTTCTGGCGAAACGCTACGGGATCAACCCGAAGACGGTCGCCAAATGGAAGGGGCGGACCGATACGTCGGATCGACGCA
CCGGTCCGAAGGTCGCATCCTCAACCATCCTGTCGACCGAAGAAGAAGCGATCGTTGTGGCCTTCCGTCGCCATACCCTG
CTGCCTCTTGATGATTGCCTTTATGCGCTTCAGGCGACGATCCCGCATCTGACGCGATCTTCCCTGCACCGTTGTTTTCA
GCGCCATGGGATCAGCCGCCTGCCCGAGACCGAAGGCGACAAACCAAAACGGTCGAAGTTCAAGAGTTATCCGATCGGCT
ATTTTCACATCGACATTGCTGAAGTCCGCACTGAAATGGGGCGCCTTTATCTTCTGGTGGCGATCGACCGGACCTCGAAA
TTCGCTTTTGTCCAATTGCACGAGAAAGCGACACGTCGCGTTGCCGGTGACTTCCTGCGTGCTCTGGCCGCTGCGGTTCC
CTACCGCATCCATACCGTGCTGACCGATAACGGCACGCATTTTACCGATCCGGCCGGCAATGGATGGACACCCGAAGACA
TCAAGGCCATGCGGGCGGATGGTGTCCTGTTCCGGTGCCACTCTTTTGAACTGGCCTGTGCTGATCTCGATATCGAGCAT
CGACTGACAAAGCCGCGACATCCCTGGACGAATGGCCAGGTCGAGAGGATGAACCGCACGATCAAGGACGCCACCGTCAA
GCGCTTCTACTACGAAACACATGACCAGTTGCGTCAACACCTCGCCGACTTCGTTACCGCCTACAATTTCGCCCGCAGGC
TCAAGACCCTGCGCGGCCTCACTCCATATGAATTCATTTGTCAGCAGTGGGAAAAAGAACCATCACGGTTCATACATAAT
CCGCACCACCAAATCCCGGGACAAAACACCTAG

Upstream 100 bases:

>100_bases
GCGGGATAGCCTGCCCCGCTTCATCGACAAAAAGCCATCCTAGATGTTTGGTCCCGGGATTTGGTGGTGCATTATTTTCA
CATGAGTGGAAGGATGCGCT

Downstream 100 bases:

>100_bases
AGAGCTTTCGCCAAGATCCCTGAACTGGGTTGCAATCGATGCAAATGTACTGGAAATGACAGGCACAACCATAAAGAGGC
TTTGCCATATAGGAAGAGCA

Product: integrase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Hypothethical Protein Transposase; Instegrase; Noncomposite Transposon Transposase; Transposase Of

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTL
LPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSK
FAFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHN
PHHQIPGQNT

Sequences:

>Translated_330_residues
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTL
LPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSK
FAFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHN
PHHQIPGQNT
>Mature_329_residues
GQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTLL
PLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKF
AFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHR
LTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHNP
HHQIPGQNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37901; Mature: 37769

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHHHH
STILSTEEEAIVVAFRRHTLLPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGD
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKFAFVQLHEKATRRVAGDFLR
CCHHHHHCCCCCEEEEEEHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHH
ALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
HHHHHCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCEEEEEECCEEEEECCCHHH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYEFICQQWEKEPSRFIHNPHHQIPGQNT
CHHHHHHHHHHHCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHHHH
STILSTEEEAIVVAFRRHTLLPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGD
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKFAFVQLHEKATRRVAGDFLR
CCHHHHHCCCCCEEEEEEHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHH
ALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
HHHHHCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCEEEEEECCEEEEECCCHHH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYEFICQQWEKEPSRFIHNPHHQIPGQNT
CHHHHHHHHHHHCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA