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The map label for this gene is yfhP [C]

Identifier: 162147274

GI number: 162147274

Start: 1487695

End: 1488144

Strand: Reverse

Name: yfhP [C]

Synonym: GDI_1479

Alternate gene names: 162147274

Gene position: 1488144-1487695 (Counterclockwise)

Preceding gene: 162147276

Following gene: 162147273

Centisome position: 37.73

GC content: 68.67

Gene sequence:

>450_bases
ATGCTTCTTCGGCGTGACAGGGCCATGATCGCGGTGCTCATCATGCTCGACGTCGCATTCCATGCCGGGCGAAGCGGTAC
CGTCAGCGCCGCCGACATCGCCGAACGCGCCGGCCTGGCCCGGCGCGGGATCGAGCCGCTGCTGCAGACATTGTCGCGGT
CCAGCCTGCTGGAAAGCGTGCGCGGGCCGCGCGGCGGCTACCGCCTGGGCCGGCCCCGGCGGGATATCACCCTGGCCGAC
ATCGTCGAAATCGCGACCGCCGATGATTCGTCGTCCGATGACGGGCCGGTGGGCGCGCTGTTCACCAAGGTGATCGAACC
CTGCTGGCAGAAGCTGGACGACACGCTGTCCACCCAGTGCCGCAAGCTGACCCTGGACGACCTGGTCCGCCGCGCGGAAT
CCAGCGGCATGCGCCGGCCCATGGCGGAACCCATCACCTTCTCGATCTGA

Upstream 100 bases:

>100_bases
AGAAGCGTGGATCATCGTCCCCATTCCTGTTAGCTTCGCGCCATCACACGGGCCATGCCCCCCGATGGGCGCGGCGAATC
CAGCACAGGAGAGACCCAGG

Downstream 100 bases:

>100_bases
CGGGCCGCGCCCGGCCCGGGCTCGGGCCGGACAATGGGCTCCCGAAGGCTCGTTAATGAGCCGCCGGCGTCGTCTTCTGG
CTCTTCGCCGGGGTCCTGGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLLRRDRAMIAVLIMLDVAFHAGRSGTVSAADIAERAGLARRGIEPLLQTLSRSSLLESVRGPRGGYRLGRPRRDITLAD
IVEIATADDSSSDDGPVGALFTKVIEPCWQKLDDTLSTQCRKLTLDDLVRRAESSGMRRPMAEPITFSI

Sequences:

>Translated_149_residues
MLLRRDRAMIAVLIMLDVAFHAGRSGTVSAADIAERAGLARRGIEPLLQTLSRSSLLESVRGPRGGYRLGRPRRDITLAD
IVEIATADDSSSDDGPVGALFTKVIEPCWQKLDDTLSTQCRKLTLDDLVRRAESSGMRRPMAEPITFSI
>Mature_149_residues
MLLRRDRAMIAVLIMLDVAFHAGRSGTVSAADIAERAGLARRGIEPLLQTLSRSSLLESVRGPRGGYRLGRPRRDITLAD
IVEIATADDSSSDDGPVGALFTKVIEPCWQKLDDTLSTQCRKLTLDDLVRRAESSGMRRPMAEPITFSI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=132, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16322; Mature: 16322

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRRDRAMIAVLIMLDVAFHAGRSGTVSAADIAERAGLARRGIEPLLQTLSRSSLLESV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RGPRGGYRLGRPRRDITLADIVEIATADDSSSDDGPVGALFTKVIEPCWQKLDDTLSTQC
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKLTLDDLVRRAESSGMRRPMAEPITFSI
HHCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLRRDRAMIAVLIMLDVAFHAGRSGTVSAADIAERAGLARRGIEPLLQTLSRSSLLESV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RGPRGGYRLGRPRRDITLADIVEIATADDSSSDDGPVGALFTKVIEPCWQKLDDTLSTQC
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKLTLDDLVRRAESSGMRRPMAEPITFSI
HHCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9582371 [H]