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The map label for this gene is ybbK [C]

Identifier: 162147261

GI number: 162147261

Start: 1469319

End: 1470194

Strand: Direct

Name: ybbK [C]

Synonym: GDI_1466

Alternate gene names: 162147261

Gene position: 1469319-1470194 (Clockwise)

Preceding gene: 162147260

Following gene: 162147265

Centisome position: 37.25

GC content: 67.01

Gene sequence:

>876_bases
ATGAATGCCATTACCCTTGTCCTGTCGGCGGCGCTGCTTCTGGCCGGGCTGCTGTTCGGCGGCCTGTGGAGCGCCGAAGG
GATGTTCAACCCGGCAGTCGCCCTGCCGTTCCTGGCCCTGTCGGTGCTGGTGTTCCTGTCGCTGCGGATGGCCAATGTCT
GGGAAAAATTCGTGGTGCTGCGGATGGGGCGACTGCAGGGCGTGCGCGGACCCGGCCTGTTCATGATCGTCCCGGTCATC
GACCGGATCGTCGCGATCATCGACGAGCGCATCCAGACCACCGGCTTCAACGCCGAACAGGCGCTGACCCGCGACACGGT
GCCGGTGAATGTCGATGCCGTGATCTTCTGGCATGTCCGCGATGCCGAGGCCGCGGCCCTGCGGATTACAAACTACCGCG
AGGCCATCGACCGGATCGCCCAGACCTCGCTGCGCGAGATGATCGGCGCGTCCATGCTGGCGGCGCTGCTGTCCGACCGC
CGGACGTCCAACGAACAGTTGCGCGCGGAAATCGGCACCAAGACCGCCGCCTGGGGCATCGACGTGATGTCGGTCGAAAT
CCGCGACGTCGCCATTCCCGTCGCCCTGCAGGACGCGATGTCGCGCCAGGCCCAGGCCGAGCGCGAAAAGCAGGCGCGGA
TCATCCTGGGATCGGCCGAGGCCGAGGTGGCGGGCCGGTTCGTGGATGCGGCCGAGGCCTATGCCGGCCACCCCGCCGCC
CTGCAACTGCGCGCCATGAACATCATCTACGAGACGACCAAGGAACGCGGGGCGACGATCCTGATCCCCACCAGCATGAT
CGACAGCATGAATCCGGCCTCGGCGCTGGTGCTGTCGAATATGGCGGCGCCCGCCGTGCGAAGCGCCGCCGAGTGA

Upstream 100 bases:

>100_bases
GGCGCGGGCACAAGTCAAATCCTGTCTCCGCCCGGCCGTCCTTGAACCCGGCCCCCCCGCGTGCCAACGTGACGATCCGG
TCTGCCCGAGGGGGCGTATC

Downstream 100 bases:

>100_bases
CCCGGGACGGTCCCGAGGGACTGTCCCGGGGCAGTGCCGTCAGTGCGACAGCGCGGCCAGCCATGGCGTCAGGGCCGCCT
GGGCCCGGCCCGCGATGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNAITLVLSAALLLAGLLFGGLWSAEGMFNPAVALPFLALSVLVFLSLRMANVWEKFVVLRMGRLQGVRGPGLFMIVPVI
DRIVAIIDERIQTTGFNAEQALTRDTVPVNVDAVIFWHVRDAEAAALRITNYREAIDRIAQTSLREMIGASMLAALLSDR
RTSNEQLRAEIGTKTAAWGIDVMSVEIRDVAIPVALQDAMSRQAQAEREKQARIILGSAEAEVAGRFVDAAEAYAGHPAA
LQLRAMNIIYETTKERGATILIPTSMIDSMNPASALVLSNMAAPAVRSAAE

Sequences:

>Translated_291_residues
MNAITLVLSAALLLAGLLFGGLWSAEGMFNPAVALPFLALSVLVFLSLRMANVWEKFVVLRMGRLQGVRGPGLFMIVPVI
DRIVAIIDERIQTTGFNAEQALTRDTVPVNVDAVIFWHVRDAEAAALRITNYREAIDRIAQTSLREMIGASMLAALLSDR
RTSNEQLRAEIGTKTAAWGIDVMSVEIRDVAIPVALQDAMSRQAQAEREKQARIILGSAEAEVAGRFVDAAEAYAGHPAA
LQLRAMNIIYETTKERGATILIPTSMIDSMNPASALVLSNMAAPAVRSAAE
>Mature_291_residues
MNAITLVLSAALLLAGLLFGGLWSAEGMFNPAVALPFLALSVLVFLSLRMANVWEKFVVLRMGRLQGVRGPGLFMIVPVI
DRIVAIIDERIQTTGFNAEQALTRDTVPVNVDAVIFWHVRDAEAAALRITNYREAIDRIAQTSLREMIGASMLAALLSDR
RTSNEQLRAEIGTKTAAWGIDVMSVEIRDVAIPVALQDAMSRQAQAEREKQARIILGSAEAEVAGRFVDAAEAYAGHPAA
LQLRAMNIIYETTKERGATILIPTSMIDSMNPASALVLSNMAAPAVRSAAE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=237, Percent_Identity=33.7552742616034, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI21686995, Length=241, Percent_Identity=31.5352697095436, Blast_Score=128, Evalue=7e-30,
Organism=Homo sapiens, GI221316744, Length=241, Percent_Identity=31.5352697095436, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI7657615, Length=222, Percent_Identity=26.5765765765766, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI7305503, Length=170, Percent_Identity=28.8235294117647, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI1786697, Length=181, Percent_Identity=34.8066298342541, Blast_Score=98, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17569493, Length=233, Percent_Identity=33.9055793991416, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI193209764, Length=231, Percent_Identity=33.7662337662338, Blast_Score=141, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17569497, Length=237, Percent_Identity=31.6455696202532, Blast_Score=141, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI25153583, Length=229, Percent_Identity=33.6244541484716, Blast_Score=136, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71987612, Length=231, Percent_Identity=33.7662337662338, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71987621, Length=229, Percent_Identity=33.6244541484716, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17569499, Length=229, Percent_Identity=34.061135371179, Blast_Score=133, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17570459, Length=234, Percent_Identity=34.6153846153846, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32566490, Length=228, Percent_Identity=34.2105263157895, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI193210507, Length=250, Percent_Identity=30.4, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17570161, Length=250, Percent_Identity=30.4, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71989948, Length=223, Percent_Identity=29.5964125560538, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI32564147, Length=164, Percent_Identity=33.5365853658537, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI71989955, Length=160, Percent_Identity=30.625, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17542664, Length=159, Percent_Identity=30.8176100628931, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=31.9327731092437, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI45556022, Length=231, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24657857, Length=234, Percent_Identity=35.8974358974359, Blast_Score=140, Evalue=8e-34,
Organism=Drosophila melanogaster, GI62484448, Length=234, Percent_Identity=35.8974358974359, Blast_Score=140, Evalue=9e-34,
Organism=Drosophila melanogaster, GI281365664, Length=234, Percent_Identity=35.8974358974359, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI62484274, Length=234, Percent_Identity=35.8974358974359, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI18860517, Length=226, Percent_Identity=33.1858407079646, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI21356845, Length=231, Percent_Identity=28.1385281385281, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI28573263, Length=228, Percent_Identity=30.2631578947368, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281361631, Length=232, Percent_Identity=28.0172413793103, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281361633, Length=232, Percent_Identity=28.0172413793103, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI45550506, Length=171, Percent_Identity=32.1637426900585, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI281361635, Length=174, Percent_Identity=26.4367816091954, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 31455; Mature: 31455

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAITLVLSAALLLAGLLFGGLWSAEGMFNPAVALPFLALSVLVFLSLRMANVWEKFVVL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGRLQGVRGPGLFMIVPVIDRIVAIIDERIQTTGFNAEQALTRDTVPVNVDAVIFWHVR
HHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEEEEEE
DAEAAALRITNYREAIDRIAQTSLREMIGASMLAALLSDRRTSNEQLRAEIGTKTAAWGI
CCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCE
DVMSVEIRDVAIPVALQDAMSRQAQAEREKQARIILGSAEAEVAGRFVDAAEAYAGHPAA
EEEEEEEEHEEEHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCHH
LQLRAMNIIYETTKERGATILIPTSMIDSMNPASALVLSNMAAPAVRSAAE
EEHHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAITLVLSAALLLAGLLFGGLWSAEGMFNPAVALPFLALSVLVFLSLRMANVWEKFVVL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGRLQGVRGPGLFMIVPVIDRIVAIIDERIQTTGFNAEQALTRDTVPVNVDAVIFWHVR
HHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEEEEEE
DAEAAALRITNYREAIDRIAQTSLREMIGASMLAALLSDRRTSNEQLRAEIGTKTAAWGI
CCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCE
DVMSVEIRDVAIPVALQDAMSRQAQAEREKQARIILGSAEAEVAGRFVDAAEAYAGHPAA
EEEEEEEEHEEEHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCHH
LQLRAMNIIYETTKERGATILIPTSMIDSMNPASALVLSNMAAPAVRSAAE
EEHHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]