Click here to switch to the map view.

The map label for this gene is yecS [H]

Identifier: 162147152

GI number: 162147152

Start: 1358319

End: 1359818

Strand: Direct

Name: yecS [H]

Synonym: GDI_1357

Alternate gene names: 162147152

Gene position: 1358319-1359818 (Clockwise)

Preceding gene: 162147151

Following gene: 162147153

Centisome position: 34.44

GC content: 67.47

Gene sequence:

>1500_bases
ATGAGGCTGTTTGTCGCATTGCTGCTGCTGGCGGCGGTCATGGTGGGACATGCCCATGCCGCGCCGCTGCGCTGGGCGTC
GGATGCCGAGGCGAACGTGCCGTTCGTCTTCCACGACCCCGCCGACCAGTCCCGCCTGACCGGTTACGAATACGACATCG
CCCAGGCCATCGCCCGCCGTCTCGGCCGTCCGACCCAATTCGTGCAGAACGACTGGGACGGGCTGATTCCCGGCCTGCAG
CGCGGGCTGTACGACATGGTCATCGACGGGATCGAGATCACGCCCGAGCATGAACAGGGCGTGCTGTTCAGCCATCCCTA
TTACGTCACGTCGGAACGCATCACCGTCCGCCGCGACCAGCAGGGGCTCGATACGCTGGCGGCGCTGCGCGGGCATGTCG
TCGGCACGCTGAAGGACACCACGGCCGAACGCATGCTGCAGGCCGACCCCACGATTCGCATCCGATCGTACGAGGAAGAA
ACCAACGCCTACACCGACCTGAAGAACGGCCGGCTGGATGCGGTGCTGCTGGACGGCACCATCGCGCTCTATTACGGCGC
GCCCGATCCGGGGCTGAAGCTGGTGGGGGACCCGATCGGCCGGGTGGCCTACGGCGTCGCCTTCGCCCAGGGGAACACCA
CGCTGCGCGACCAGGTGAATACGGCGCTGGACGGCATGATCCGCGACGGCGAACTGCACCGGATCCTCGCGCGCTGGAAC
CTGTGGACGCCTGCCATGGCGGACCTGACCATGGATGCGACCACGCCCGATATCGCGCCGGACGCAATGGCGGCATTACA
TGGCGGCCACTGCCCCCGCCACGGCTGGCGCGCGCGGGTGGACCGGTATGTCAGCTTCCTGCCGCTGCTGCTGCATGGCG
CGGTACTGACGCTCGCGGTGTCGGCCTGCGCCATGGTGGTGGCGGTCGGGCTGGGGCTGGCCCTGGCGCTGCTGCGGCGG
TATGGGCCGCGCTGGCTGGGGGCGCTGGCGACGCTGTATGTCGAAATCGTGCGCGGCACCCCGCTGCTGATCCAGATCCT
GTTCATCTTCTATGCCCTGCCGGGCATCGGGCTGCGCCTGTCGCCCTTCGTGGCCGGCGTCGTGGCCCTGGGCATGAATT
ACGCGGCCTACGAGGCCGAGAATTACCGCGCCGGCCTGCAATCCGTCGCACGCGGCCAGGTCGAGGCCGCGCTGGCCCTG
AACATGACCCACATGCAGGCCCTGCGCTTCGTGGTGGTGCCGCAGGCGGTGCGCATGGTCATCCCGGTGATGACCAACGA
TTTCATCTCGCTGCTGAAGGACTCGTCGCTGGTCAGCGTGATCACGCTGACCGAACTCAGCCAGACCTATGTGCGGTTGT
CCTCGACCTATTACGATTATTTCGGCACCGGCCTGCTGATCGGTACCGCCTACCTGCTGCTGGGCCTGCCCTTCGTGCGC
TTGGCCCGCATGGCCGAAGCCCGGTTCCAGGCCGGGCAGCGCCGCCGGGGCCATATTTGA

Upstream 100 bases:

>100_bases
TGTTCATGGATGGCGGCGAAATCGTCGAAATCGACGATCCCGACACGCTCTATGTCGCCCCGAAGGATGCGCGCACCCGC
CGGTTTCTCAGGTCCATGTT

Downstream 100 bases:

>100_bases
AGCGGCCCCTGATCGCAAAGGGTTGATGCGCTTGATGCGTCAGGCACATGACGGCGCTGTTTTATGCTAGATTGTGCATA
AATAGTCCGAGGCATAGAAA

Product: inner membrane amino-acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MRLFVALLLLAAVMVGHAHAAPLRWASDAEANVPFVFHDPADQSRLTGYEYDIAQAIARRLGRPTQFVQNDWDGLIPGLQ
RGLYDMVIDGIEITPEHEQGVLFSHPYYVTSERITVRRDQQGLDTLAALRGHVVGTLKDTTAERMLQADPTIRIRSYEEE
TNAYTDLKNGRLDAVLLDGTIALYYGAPDPGLKLVGDPIGRVAYGVAFAQGNTTLRDQVNTALDGMIRDGELHRILARWN
LWTPAMADLTMDATTPDIAPDAMAALHGGHCPRHGWRARVDRYVSFLPLLLHGAVLTLAVSACAMVVAVGLGLALALLRR
YGPRWLGALATLYVEIVRGTPLLIQILFIFYALPGIGLRLSPFVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALAL
NMTHMQALRFVVVPQAVRMVIPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGLLIGTAYLLLGLPFVR
LARMAEARFQAGQRRRGHI

Sequences:

>Translated_499_residues
MRLFVALLLLAAVMVGHAHAAPLRWASDAEANVPFVFHDPADQSRLTGYEYDIAQAIARRLGRPTQFVQNDWDGLIPGLQ
RGLYDMVIDGIEITPEHEQGVLFSHPYYVTSERITVRRDQQGLDTLAALRGHVVGTLKDTTAERMLQADPTIRIRSYEEE
TNAYTDLKNGRLDAVLLDGTIALYYGAPDPGLKLVGDPIGRVAYGVAFAQGNTTLRDQVNTALDGMIRDGELHRILARWN
LWTPAMADLTMDATTPDIAPDAMAALHGGHCPRHGWRARVDRYVSFLPLLLHGAVLTLAVSACAMVVAVGLGLALALLRR
YGPRWLGALATLYVEIVRGTPLLIQILFIFYALPGIGLRLSPFVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALAL
NMTHMQALRFVVVPQAVRMVIPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGLLIGTAYLLLGLPFVR
LARMAEARFQAGQRRRGHI
>Mature_499_residues
MRLFVALLLLAAVMVGHAHAAPLRWASDAEANVPFVFHDPADQSRLTGYEYDIAQAIARRLGRPTQFVQNDWDGLIPGLQ
RGLYDMVIDGIEITPEHEQGVLFSHPYYVTSERITVRRDQQGLDTLAALRGHVVGTLKDTTAERMLQADPTIRIRSYEEE
TNAYTDLKNGRLDAVLLDGTIALYYGAPDPGLKLVGDPIGRVAYGVAFAQGNTTLRDQVNTALDGMIRDGELHRILARWN
LWTPAMADLTMDATTPDIAPDAMAALHGGHCPRHGWRARVDRYVSFLPLLLHGAVLTLAVSACAMVVAVGLGLALALLRR
YGPRWLGALATLYVEIVRGTPLLIQILFIFYALPGIGLRLSPFVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALAL
NMTHMQALRFVVVPQAVRMVIPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGLLIGTAYLLLGLPFVR
LARMAEARFQAGQRRRGHI

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=37.1428571428571, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787088, Length=246, Percent_Identity=32.520325203252, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1787085, Length=245, Percent_Identity=29.3877551020408, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786873, Length=173, Percent_Identity=38.150289017341, Blast_Score=112, Evalue=7e-26,
Organism=Escherichia coli, GI1787030, Length=206, Percent_Identity=32.0388349514563, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1787031, Length=242, Percent_Identity=31.8181818181818, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788228, Length=209, Percent_Identity=31.5789473684211, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1786874, Length=176, Percent_Identity=35.2272727272727, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=28.9592760180996, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788648, Length=219, Percent_Identity=27.8538812785388, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=29.3269230769231, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787087, Length=215, Percent_Identity=27.4418604651163, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=27.4038461538462, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788649, Length=219, Percent_Identity=26.4840182648402, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787086, Length=223, Percent_Identity=26.9058295964126, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI48994930, Length=117, Percent_Identity=36.7521367521368, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 54839; Mature: 54839

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFVALLLLAAVMVGHAHAAPLRWASDAEANVPFVFHDPADQSRLTGYEYDIAQAIARR
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
LGRPTQFVQNDWDGLIPGLQRGLYDMVIDGIEITPEHEQGVLFSHPYYVTSERITVRRDQ
CCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCEEEECCCEEEECCH
QGLDTLAALRGHVVGTLKDTTAERMLQADPTIRIRSYEEETNAYTDLKNGRLDAVLLDGT
HHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCEEEEEECCE
IALYYGAPDPGLKLVGDPIGRVAYGVAFAQGNTTLRDQVNTALDGMIRDGELHRILARWN
EEEEECCCCCCCEECCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
LWTPAMADLTMDATTPDIAPDAMAALHGGHCPRHGWRARVDRYVSFLPLLLHGAVLTLAV
CCCCCHHCEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SACAMVVAVGLGLALALLRRYGPRWLGALATLYVEIVRGTPLLIQILFIFYALPGIGLRL
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
SPFVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQAVRMV
HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGLLIGTAYLLLGLPFVR
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
LARMAEARFQAGQRRRGHI
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRLFVALLLLAAVMVGHAHAAPLRWASDAEANVPFVFHDPADQSRLTGYEYDIAQAIARR
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
LGRPTQFVQNDWDGLIPGLQRGLYDMVIDGIEITPEHEQGVLFSHPYYVTSERITVRRDQ
CCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCEEEECCCEEEECCH
QGLDTLAALRGHVVGTLKDTTAERMLQADPTIRIRSYEEETNAYTDLKNGRLDAVLLDGT
HHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCEEEEEECCE
IALYYGAPDPGLKLVGDPIGRVAYGVAFAQGNTTLRDQVNTALDGMIRDGELHRILARWN
EEEEECCCCCCCEECCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
LWTPAMADLTMDATTPDIAPDAMAALHGGHCPRHGWRARVDRYVSFLPLLLHGAVLTLAV
CCCCCHHCEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SACAMVVAVGLGLALALLRRYGPRWLGALATLYVEIVRGTPLLIQILFIFYALPGIGLRL
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
SPFVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQAVRMV
HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGLLIGTAYLLLGLPFVR
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
LARMAEARFQAGQRRRGHI
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]