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The map label for this gene is ccmA [H]

Identifier: 162147149

GI number: 162147149

Start: 1353881

End: 1354432

Strand: Reverse

Name: ccmA [H]

Synonym: GDI_1354

Alternate gene names: 162147149

Gene position: 1354432-1353881 (Counterclockwise)

Preceding gene: 162147155

Following gene: 162147148

Centisome position: 34.34

GC content: 69.02

Gene sequence:

>552_bases
TTGCTGCGCGTGCTGGCAGGGCTGCGCAAACCGGAAGGCGGCCATGTGCTGTGGGCAGGGATCGATGCGCTGTCGGACCG
GACGGCCCATGCCGCGCGCATTGCGTATCTGGGCCATCAGGACGCGCTGAAACCCGGCCTGACCCTGCGCGAAAACCTGT
TCCTGGCCGCGCGGGCGGGCGGGTCCGATCCCGATCGGGCCATGGCGGCGCTGGATCTTTCGGGTTTGGCCGACCTGCCC
GCCCGCCTGCTGTCCGCCGGGCAGAAACGGCGGGCCGCGCTGGCGCGGGTGGTGCTGGCGCAGGCGCCGCTATGGCTGCT
GGACGAACCCAGCCTGGGGCTGGACAGCATGGCGATCGGCCTGCTGGAGACGCTGTTTCAGACCCATCGGGAGGCTGGCG
GAATCGTGATTGCAACCACCCATGTTCCCCTGCCGCTGCCGGACGCGAAAACCCTGGTCCTGCCCGGCGCGACCGAACCG
GCGCCGGATTTTGGGATGGAATCAGGATTCGATTCCCATGCGGACCACTCCCACGCGGACCACTGGGCATGA

Upstream 100 bases:

>100_bases
TTTCCGCGGGGAACGGCTGGTTCTCGACGGCGTCGGGCTGCGGCTGGACGCGGGTGACGCGCTGCTGCTGACGGGGCCGA
ACGGGGCGGGAAAGTCCACG

Downstream 100 bases:

>100_bases
ACGCGTCGATTCCCGCCCTGCTGGCCGCCGTCATCGGGCGCGACCTGCGGCTGGCGCTGCGTCACGGGGCCGACACGCTG
GGTGCCGTGCTGTTCTTCAT

Product: cytochrome c biogenesis ATP-binding export protein ccmA

Products: NA

Alternate protein names: Heme exporter protein A [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLRVLAGLRKPEGGHVLWAGIDALSDRTAHAARIAYLGHQDALKPGLTLRENLFLAARAGGSDPDRAMAALDLSGLADLP
ARLLSAGQKRRAALARVVLAQAPLWLLDEPSLGLDSMAIGLLETLFQTHREAGGIVIATTHVPLPLPDAKTLVLPGATEP
APDFGMESGFDSHADHSHADHWA

Sequences:

>Translated_183_residues
MLRVLAGLRKPEGGHVLWAGIDALSDRTAHAARIAYLGHQDALKPGLTLRENLFLAARAGGSDPDRAMAALDLSGLADLP
ARLLSAGQKRRAALARVVLAQAPLWLLDEPSLGLDSMAIGLLETLFQTHREAGGIVIATTHVPLPLPDAKTLVLPGATEP
APDFGMESGFDSHADHSHADHWA
>Mature_183_residues
MLRVLAGLRKPEGGHVLWAGIDALSDRTAHAARIAYLGHQDALKPGLTLRENLFLAARAGGSDPDRAMAALDLSGLADLP
ARLLSAGQKRRAALARVVLAQAPLWLLDEPSLGLDSMAIGLLETLFQTHREAGGIVIATTHVPLPLPDAKTLVLPGATEP
APDFGMESGFDSHADHSHADHWA

Specific function: Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system [H]

COG id: COG4133

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87082064, Length=142, Percent_Identity=40.8450704225352, Blast_Score=103, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR005895
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.41 [H]

Molecular weight: Translated: 19315; Mature: 19315

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVLAGLRKPEGGHVLWAGIDALSDRTAHAARIAYLGHQDALKPGLTLRENLFLAARAG
CCCHHCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCHHHCCCCCEECCCEEEEEECC
GSDPDRAMAALDLSGLADLPARLLSAGQKRRAALARVVLAQAPLWLLDEPSLGLDSMAIG
CCCHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH
LLETLFQTHREAGGIVIATTHVPLPLPDAKTLVLPGATEPAPDFGMESGFDSHADHSHAD
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
HWA
CCC
>Mature Secondary Structure
MLRVLAGLRKPEGGHVLWAGIDALSDRTAHAARIAYLGHQDALKPGLTLRENLFLAARAG
CCCHHCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCHHHCCCCCEECCCEEEEEECC
GSDPDRAMAALDLSGLADLPARLLSAGQKRRAALARVVLAQAPLWLLDEPSLGLDSMAIG
CCCHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH
LLETLFQTHREAGGIVIATTHVPLPLPDAKTLVLPGATEPAPDFGMESGFDSHADHSHAD
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
HWA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA