Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yffH [C]

Identifier: 162147103

GI number: 162147103

Start: 1309117

End: 1309695

Strand: Reverse

Name: yffH [C]

Synonym: GDI_1308

Alternate gene names: 162147103

Gene position: 1309695-1309117 (Counterclockwise)

Preceding gene: 162147106

Following gene: 162147099

Centisome position: 33.21

GC content: 69.08

Gene sequence:

>579_bases
ATGAGCATGGACATTCCACCCGATGATGACGGGGGCTTCGTCACGCTGTCATCGCGCGTCGTCTATGAAAACCCGTGGAC
GCGCCTGCGCGAGGACATCATCCGCCGCCCCGACGGGGGCGAGGGGCTGTACGGCGTGGTCGAACGGACGGAATTCGTCG
TCATCGTGCCGCTGGGCGAGGGGCCGGACGGCCCCACCGTCACCCTGGTGCGGCAATATCGCTATCCGGTGCGCGCGCGA
TTGTGGGAATTGCCGATGGGCATGTGGGAACACCGCCCCGACACCGACCCCGAGATCGTGGCGCGCGGCGAACTGGAAGA
GGAGACCGGCCTGCGCGCCGGGCAACTGCGCCATGCCGGCACGCTGTACCAGGGCCCGGGCTATTCCACCCAGCGCGGCC
ATGTCTACCTGGCCACCGACCTGACGCAGGGCGAGCCCCGGCGCGAGACGACGGAAGGGGACATGACCTGCCATACGATC
CCGCTGGCGGAGGTGGAGCGGATGATCGGCGCCGGCGACATCACCTGCATGGCCACGCTGGCCGCCATGACGCTGGTCCG
GGCGCGGAGGTGGCTGTAG

Upstream 100 bases:

>100_bases
GGCCGTCACGACCGCGCGAGATGCGGACGGAATGTTGACGCCGCCACCCACCCGCACGCCATGATCACCCCCTGTCGCGG
ACACGGGGGCACGACCGAAC

Downstream 100 bases:

>100_bases
GCCCCGCGACGGCAAGGGGCCGGAGCCCTTGCCGTCGCGGCCAGTGCGACCGGGTTCAGTGCGCCGGGGCGGCCGGCGCG
GGGGCGGGCGGGGCCAGGGT

Product: NUDIX/MutT-family protein

Products: AMP; D-ribose 5-phosphate

Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; NTP Pyrophosphohydrolase; ADP-Ribose Diphosphatase; MutT/NUDIX Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Hydrolase; Hydrolase Protein; ADPribose Diphosphatase; NUDIX Hydroxylase; Nudix Hydroxylase; NUDIX Family Hydrolase; NTP Pyrophosphohydrolases; Hydrolase MutT; Pyrophosphohydrolase Related Protein; NUDIX Domain-Containing; MutT/Nudix ADP-Ribose Pyrophosphatase; Nudix Superfamily Hydrolase; Hydrolase NUDIX Family Domain Protein; Hydrolase Nudix Family Protein; Hydrolase NUDIX Family Protein; NUDIX Family Protein

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGEGPDGPTVTLVRQYRYPVRAR
LWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAGTLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTI
PLAEVERMIGAGDITCMATLAAMTLVRARRWL

Sequences:

>Translated_192_residues
MSMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGEGPDGPTVTLVRQYRYPVRAR
LWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAGTLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTI
PLAEVERMIGAGDITCMATLAAMTLVRARRWL
>Mature_191_residues
SMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGEGPDGPTVTLVRQYRYPVRARL
WELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAGTLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTIP
LAEVERMIGAGDITCMATLAAMTLVRARRWL

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.13

Molecular weight: Translated: 21568; Mature: 21437

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGE
CCCCCCCCCCCCEEEEECEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCC
GPDGPTVTLVRQYRYPVRARLWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAG
CCCCCEEEEEEHHCCCHHHHHHHCCCCHHCCCCCCCCCEEECCCCCHHHCCCCCCCCCCC
TLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTIPLAEVERMIGAGDITCMATL
CEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHH
AAMTLVRARRWL
HHHHHHHHHHCC
>Mature Secondary Structure 
SMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGE
CCCCCCCCCCCEEEEECEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCC
GPDGPTVTLVRQYRYPVRARLWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAG
CCCCCEEEEEEHHCCCHHHHHHHCCCCHHCCCCCCCCCEEECCCCCHHHCCCCCCCCCCC
TLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTIPLAEVERMIGAGDITCMATL
CEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHH
AAMTLVRARRWL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADPribose; H2O

Specific reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA