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The map label for this gene is puuD [C]

Identifier: 162147096

GI number: 162147096

Start: 1300572

End: 1301303

Strand: Reverse

Name: puuD [C]

Synonym: GDI_1301

Alternate gene names: 162147096

Gene position: 1301303-1300572 (Counterclockwise)

Preceding gene: 162147099

Following gene: 162147095

Centisome position: 32.99

GC content: 70.9

Gene sequence:

>732_bases
ATGAGTTCGTCCCGCCCCCTGATCGGCGTGACCCTGGACAGCGAGCCCGGCACCCCGCAGGGGGGCGGCTATTCACGCTA
TCCCTGGTACGCGCTGCGCCGGAACTACCTGGATGCCGTCGCCGACGCGGGCGGCATTCCGGTGGCGCTGCCCCATTGCG
CCGACCTGGCGCCCGACATCCTGGCGCGGTTGGACGGGCTGGTGGTCACCGGGGGCGCATTCGACGTCGATCCCGCACTG
TATGGCGCGGACACCCGCCATGCGACCGTGACCCTGAAATCGGACCGCACGCGCGCCGAACTGGCGCTGACGCGGGGCGC
GATCGCGCGGGACATGCCGCTGCTGGGCATCTGCGGCGGCCAGCAGCTTCTGGCGGTGGCGCTGGGCGGCAGCCTGGTCC
AGCATATTCCCGACGCGATCCCCGGCGCCCTGCCGCACGAGCAGCCCAACCCCCGCCACGAGGCCGGCCACCAGGTCGCG
ATCACCCCCGGCACGCTGCTGGCGCGGGTGACGCAGGCCGCGCGCATCGCGGTCAATTCCGCCCATCACCAGGCCGTTCG
CACCCCCGGCGAGGCGATCGTCTGCGCCATCGCGCCGGACGGCGTGGTCGAGGCGATCGAGCATCCGGCACGGCGGTTTT
GCCTGGGCGTGCAATGGCACCCCGAATTCGCCATATCGGTAGCCGATAGACGCATCTTTGCCGCCTTGATAGAGACCTCG
GGATCGAGATGA

Upstream 100 bases:

>100_bases
GCCAGCATAGGTTCGGTCATTTCCGACGGCTGATCCGTTCGCGCGCATTCCCGTCATACGCGCTTTGCTCTAGGCCGCGC
TTTACTCTAGGCAGGGCGGA

Downstream 100 bases:

>100_bases
CACAGCACGACGACGACACGACCCAACCGGGGCACCCCGACCGGCCCGAACGTGGCGAGCGCATCGCCAAATGGCTGGCG
CGGTCCGGCGTCGCCAGCCG

Product: gamma-glutamyl-gamma-aminobutyrate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSSSRPLIGVTLDSEPGTPQGGGYSRYPWYALRRNYLDAVADAGGIPVALPHCADLAPDILARLDGLVVTGGAFDVDPAL
YGADTRHATVTLKSDRTRAELALTRGAIARDMPLLGICGGQQLLAVALGGSLVQHIPDAIPGALPHEQPNPRHEAGHQVA
ITPGTLLARVTQAARIAVNSAHHQAVRTPGEAIVCAIAPDGVVEAIEHPARRFCLGVQWHPEFAISVADRRIFAALIETS
GSR

Sequences:

>Translated_243_residues
MSSSRPLIGVTLDSEPGTPQGGGYSRYPWYALRRNYLDAVADAGGIPVALPHCADLAPDILARLDGLVVTGGAFDVDPAL
YGADTRHATVTLKSDRTRAELALTRGAIARDMPLLGICGGQQLLAVALGGSLVQHIPDAIPGALPHEQPNPRHEAGHQVA
ITPGTLLARVTQAARIAVNSAHHQAVRTPGEAIVCAIAPDGVVEAIEHPARRFCLGVQWHPEFAISVADRRIFAALIETS
GSR
>Mature_242_residues
SSSRPLIGVTLDSEPGTPQGGGYSRYPWYALRRNYLDAVADAGGIPVALPHCADLAPDILARLDGLVVTGGAFDVDPALY
GADTRHATVTLKSDRTRAELALTRGAIARDMPLLGICGGQQLLAVALGGSLVQHIPDAIPGALPHEQPNPRHEAGHQVAI
TPGTLLARVTQAARIAVNSAHHQAVRTPGEAIVCAIAPDGVVEAIEHPARRFCLGVQWHPEFAISVADRRIFAALIETSG
SR

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RPE1 insert domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=218, Percent_Identity=34.8623853211009, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697
- InterPro:   IPR005728 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 25520; Mature: 25389

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSRPLIGVTLDSEPGTPQGGGYSRYPWYALRRNYLDAVADAGGIPVALPHCADLAPDI
CCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHCCHHH
LARLDGLVVTGGAFDVDPALYGADTRHATVTLKSDRTRAELALTRGAIARDMPLLGICGG
HHHHCCEEEECCCCCCCCHHCCCCCCEEEEEEECCCCHHHHHHHHCHHHHCCCEEEECCC
QQLLAVALGGSLVQHIPDAIPGALPHEQPNPRHEAGHQVAITPGTLLARVTQAARIAVNS
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHH
AHHQAVRTPGEAIVCAIAPDGVVEAIEHPARRFCLGVQWHPEFAISVADRRIFAALIETS
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHEECCEECCCEEEEHHHHHHHHHHHHCC
GSR
CCC
>Mature Secondary Structure 
SSSRPLIGVTLDSEPGTPQGGGYSRYPWYALRRNYLDAVADAGGIPVALPHCADLAPDI
CCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHCCHHH
LARLDGLVVTGGAFDVDPALYGADTRHATVTLKSDRTRAELALTRGAIARDMPLLGICGG
HHHHCCEEEECCCCCCCCHHCCCCCCEEEEEEECCCCHHHHHHHHCHHHHCCCEEEECCC
QQLLAVALGGSLVQHIPDAIPGALPHEQPNPRHEAGHQVAITPGTLLARVTQAARIAVNS
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHH
AHHQAVRTPGEAIVCAIAPDGVVEAIEHPARRFCLGVQWHPEFAISVADRRIFAALIETS
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHEECCEECCCEEEEHHHHHHHHHHHHCC
GSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893; 11030655 [H]