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The map label for this gene is yphA [H]

Identifier: 162147015

GI number: 162147015

Start: 1211586

End: 1212104

Strand: Direct

Name: yphA [H]

Synonym: GDI_1220

Alternate gene names: 162147015

Gene position: 1211586-1212104 (Clockwise)

Preceding gene: 162147014

Following gene: 162147016

Centisome position: 30.72

GC content: 63.01

Gene sequence:

>519_bases
TTGGCGGTCAGCATCGATACGGTTTCGAACAGACAGACGGACACACGGCGGCACGGCGTGCCAGGCCCGAGGTCCGGGTC
CCGCGCTTATTGGAGAATCCTTGTCATGTTCATGCTGAACGCGCAGATGCGCGACACGATGCTGCTGGCCGCCCGCATTC
TGCTGTCCACCCTGTTCCTGATCATGGGCTGGGGGAAACTGACCGACTTTTCCGGCGCCGTTGCCTATATGGCCCAGACC
CACGTCCCCTTTCCGGCCCTGGCGGCGGCGGTCGCGACGGTAACCGAACTGGGGCTGGGCCTTGCGGTCCTCGCCGGGGT
GCTGACCGTGCCGATCGCACTGGTTCTGGCGGCCTATACGCTGGTAACGGGCCTGATCGGCCATCCATTCTGGTCCATGT
CCGGCATGATGCGCTACGACAACATGATCCATTTCTACAAGAATATCAGCATTATCGGCGGTCTTCTGGCCCTGGCGGCG
GCAGGACCGGGACGGTTCGCGCTGCGTCCGGCCAATTGA

Upstream 100 bases:

>100_bases
TTGGTGGAACGTCTGGCGCAGGATGCGCGGCGGTCCTGACGAGCGGGCTGCGAATCCTGTAAAATAAGGAAACGATGAGT
TTACGTCGTTTCTATTTCTG

Downstream 100 bases:

>100_bases
CGTGAAGCGACCTTTTGCTGTTGGCTAGGTGTTTGGTCCCGGGATTTGGTGGTGCATTATTTTCACATGAGTGGAAGGAT
GCGCTATGGGCCAGGTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAVSIDTVSNRQTDTRRHGVPGPRSGSRAYWRILVMFMLNAQMRDTMLLAARILLSTLFLIMGWGKLTDFSGAVAYMAQT
HVPFPALAAAVATVTELGLGLAVLAGVLTVPIALVLAAYTLVTGLIGHPFWSMSGMMRYDNMIHFYKNISIIGGLLALAA
AGPGRFALRPAN

Sequences:

>Translated_172_residues
MAVSIDTVSNRQTDTRRHGVPGPRSGSRAYWRILVMFMLNAQMRDTMLLAARILLSTLFLIMGWGKLTDFSGAVAYMAQT
HVPFPALAAAVATVTELGLGLAVLAGVLTVPIALVLAAYTLVTGLIGHPFWSMSGMMRYDNMIHFYKNISIIGGLLALAA
AGPGRFALRPAN
>Mature_171_residues
AVSIDTVSNRQTDTRRHGVPGPRSGSRAYWRILVMFMLNAQMRDTMLLAARILLSTLFLIMGWGKLTDFSGAVAYMAQTH
VPFPALAAAVATVTELGLGLAVLAGVLTVPIALVLAAYTLVTGLIGHPFWSMSGMMRYDNMIHFYKNISIIGGLLALAAA
GPGRFALRPAN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=125, Percent_Identity=43.2, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI87082210, Length=127, Percent_Identity=37.7952755905512, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 18464; Mature: 18333

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSIDTVSNRQTDTRRHGVPGPRSGSRAYWRILVMFMLNAQMRDTMLLAARILLSTLFL
CEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMGWGKLTDFSGAVAYMAQTHVPFPALAAAVATVTELGLGLAVLAGVLTVPIALVLAAYT
HHCCCHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTGLIGHPFWSMSGMMRYDNMIHFYKNISIIGGLLALAAAGPGRFALRPAN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure 
AVSIDTVSNRQTDTRRHGVPGPRSGSRAYWRILVMFMLNAQMRDTMLLAARILLSTLFL
EEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMGWGKLTDFSGAVAYMAQTHVPFPALAAAVATVTELGLGLAVLAGVLTVPIALVLAAYT
HHCCCHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTGLIGHPFWSMSGMMRYDNMIHFYKNISIIGGLLALAAAGPGRFALRPAN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]