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The map label for this gene is eglC [H]

Identifier: 162146955

GI number: 162146955

Start: 1155999

End: 1156862

Strand: Reverse

Name: eglC [H]

Synonym: GDI_1160

Alternate gene names: 162146955

Gene position: 1156862-1155999 (Counterclockwise)

Preceding gene: 162146956

Following gene: 162146954

Centisome position: 29.33

GC content: 65.39

Gene sequence:

>864_bases
ATGACCGGGTTCCGTCCATCTCATGTTCTCGTGATCGCCTGTCTGGTCTGCCTGGTCATGGCCGGGGGGGCGGCCCGGGC
CGCTTCGGCCGGCGGTCTGCGGCTTTGCGGCGAGATGCCGGTCTTTCATGACGAGTTCGATGACCTCCGGCTCTCGGCCT
GGCAATTGGGGGGGGCGCGCTGGATCACCCATACCCCGTGGGGAGGGGATTTCGGGGATGCGCGGTTTACCGATCCCGGC
CCGGGCTCCGCCTTTTCCGTCCATGACGGTATCCTGTCGATCGCGGCGCGCAAGGATGCCGCCGGGCGCTGGACGGCCGG
CCTGCTGGCGTCGGCGGACGGGGCCGGCAACGGCTTCACGGCGATGTACGGATATTTCGAAACCCGCATGAAACTGCCGC
CCGGCCCCGGCACATGGGTCGGGACATGGCTGAACGAATCGGCTCCGAAGGACTGGATGCTGCCGACCGTCGAAATCGAC
ACGATCGAATATTATGGCCAGTTCACCGACGGGTTTCACACCACGGTCCATGTCTGGCACGGGCGGTCGTCACAGCCGGA
CGGGGGTGCCGGGACGATCATCAAGGTGCCGGCCCATTCCCTGGTCGATGATTTCCATACCTACGGCACGCTGGTCACGC
CGCGATGGATCACCTTCTACCTCGATCGCAAGGAAATCTGGCGCAGTCCGACCCCGCCGGAACACCGGTCGCCGTTCATG
TTCCTGATCAACCTGGCGCTCGGTTCGGGCTGGCCGATCGACAAGACCCTGAATCCGGCCATCATGAAGGTGGATTACGC
CCGCGTCTATCCGGCCGCCGATCCCGCCGCGTTCGCCCGTTGCCTGGTGGGACAGGCGCATTAG

Upstream 100 bases:

>100_bases
AACCGGGCGGGGTTCGGAGGGTTAGGCCCGTGGAGCATCCGCGCGGCGCGTTCGGGTCGTCGTCGGCGCGTGTCTTGAAG
CGGGCAGCGAAAGGGGCGTC

Downstream 100 bases:

>100_bases
GACGACCCAGGTTTTCAGGTCCGTCTTGTTTCAAGGACGCAGAAGATGTTCGAAAGAGTCGTTTCAAACCTGGGTCGGCT
GATCGGCACGATACCGGCGC

Product: endo-1,3-1,4-beta-glycanase protein

Products: NA

Alternate protein names: Succinoglycan biosynthesis protein eglC [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTGFRPSHVLVIACLVCLVMAGGAARAASAGGLRLCGEMPVFHDEFDDLRLSAWQLGGARWITHTPWGGDFGDARFTDPG
PGSAFSVHDGILSIAARKDAAGRWTAGLLASADGAGNGFTAMYGYFETRMKLPPGPGTWVGTWLNESAPKDWMLPTVEID
TIEYYGQFTDGFHTTVHVWHGRSSQPDGGAGTIIKVPAHSLVDDFHTYGTLVTPRWITFYLDRKEIWRSPTPPEHRSPFM
FLINLALGSGWPIDKTLNPAIMKVDYARVYPAADPAAFARCLVGQAH

Sequences:

>Translated_287_residues
MTGFRPSHVLVIACLVCLVMAGGAARAASAGGLRLCGEMPVFHDEFDDLRLSAWQLGGARWITHTPWGGDFGDARFTDPG
PGSAFSVHDGILSIAARKDAAGRWTAGLLASADGAGNGFTAMYGYFETRMKLPPGPGTWVGTWLNESAPKDWMLPTVEID
TIEYYGQFTDGFHTTVHVWHGRSSQPDGGAGTIIKVPAHSLVDDFHTYGTLVTPRWITFYLDRKEIWRSPTPPEHRSPFM
FLINLALGSGWPIDKTLNPAIMKVDYARVYPAADPAAFARCLVGQAH
>Mature_286_residues
TGFRPSHVLVIACLVCLVMAGGAARAASAGGLRLCGEMPVFHDEFDDLRLSAWQLGGARWITHTPWGGDFGDARFTDPGP
GSAFSVHDGILSIAARKDAAGRWTAGLLASADGAGNGFTAMYGYFETRMKLPPGPGTWVGTWLNESAPKDWMLPTVEIDT
IEYYGQFTDGFHTTVHVWHGRSSQPDGGAGTIIKVPAHSLVDDFHTYGTLVTPRWITFYLDRKEIWRSPTPPEHRSPFMF
LINLALGSGWPIDKTLNPAIMKVDYARVYPAADPAAFARCLVGQAH

Specific function: Cleaves high molecular weight succinoglycan to yield LMW succinoglycan. Dynamically regulates the molecular weight distribution of succinoglycan by cleaving nascent succinoglycan only during a limited period after its synthesis, perhaps before it undergoe

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted. Note=Probably by a type-III secretion system (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: NA

Molecular weight: Translated: 31221; Mature: 31090

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFRPSHVLVIACLVCLVMAGGAARAASAGGLRLCGEMPVFHDEFDDLRLSAWQLGGAR
CCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCCCCCCCCHHEEEEEECCCEE
WITHTPWGGDFGDARFTDPGPGSAFSVHDGILSIAARKDAAGRWTAGLLASADGAGNGFT
EEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCHH
AMYGYFETRMKLPPGPGTWVGTWLNESAPKDWMLPTVEIDTIEYYGQFTDGFHTTVHVWH
HEEEEEEHEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEE
GRSSQPDGGAGTIIKVPAHSLVDDFHTYGTLVTPRWITFYLDRKEIWRSPTPPEHRSPFM
CCCCCCCCCCCCEEECCCHHHHHHHHHHCCEECCCEEEEEEEHHHHCCCCCCCCCCCCEE
FLINLALGSGWPIDKTLNPAIMKVDYARVYPAADPAAFARCLVGQAH
EEEEEHHCCCCCCCCCCCCHHEEEEHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TGFRPSHVLVIACLVCLVMAGGAARAASAGGLRLCGEMPVFHDEFDDLRLSAWQLGGAR
CCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCCCCCCCCHHEEEEEECCCEE
WITHTPWGGDFGDARFTDPGPGSAFSVHDGILSIAARKDAAGRWTAGLLASADGAGNGFT
EEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCHH
AMYGYFETRMKLPPGPGTWVGTWLNESAPKDWMLPTVEIDTIEYYGQFTDGFHTTVHVWH
HEEEEEEHEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEE
GRSSQPDGGAGTIIKVPAHSLVDDFHTYGTLVTPRWITFYLDRKEIWRSPTPPEHRSPFM
CCCCCCCCCCCCEEECCCHHHHHHHHHHCCEECCCEEEEEEEHHHHCCCCCCCCCCCCEE
FLINLALGSGWPIDKTLNPAIMKVDYARVYPAADPAAFARCLVGQAH
EEEEEHHCCCCCCCCCCCCHHEEEEHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]