Click here to switch to the map view.

The map label for this gene is insK [C]

Identifier: 162146915

GI number: 162146915

Start: 1108774

End: 1109580

Strand: Reverse

Name: insK [C]

Synonym: GDI_1114

Alternate gene names: 162146915

Gene position: 1109580-1108774 (Counterclockwise)

Preceding gene: 162146916

Following gene: 162146912

Centisome position: 28.13

GC content: 58.86

Gene sequence:

>807_bases
GTGGACAGGCTTCAGGGGGAGTGGAAGATCTCGACACGGCGGGCCTGTGCGGAGCTGCAGATCGATCGTTCCCTCTATGT
CTACAAGTCGAAGCGCGGCACGCAGGCCGAACTGACACAGCGGATCCGGGAGATCTGCGCAACCCGTGTGCGCTATGGCT
ATCGCCGCGTTCATATCCTGCTGCAGCGGGATGGCTGGGCGGTGAACCCGAAGCGGATCTATCGTCTTTACAACGAGTTG
GGCATGCAACTGCGCAACAAGGTGCCCAGGCGGCGGGTCAAGGCGAAAGTGCGCGAGGACCGTCGTCCGGCGACGCACAC
CAATGATATCTGGGCAATGGATTTTGTTCACGACCAGCTTGCGACGGGCCGCAAGATCAGGATCCTGACCGTGATCGACA
CCTTCTCCCGCTTCTCGCCGGCCACGGATCCCCGGTTCAGTTATCGCGGCGAGGATGTCGTCCAGACCCTGGAGCGGATC
TGCGGGCAGATGGGTTATCCCAGGAGCATCCGGGTCGACCAGGGCTCGGAGTTTGTCAGCCGGGATCTGGATCTATGGGC
GTATCAGAAGGGTGTCGTGCTCGACTTTTCTCGCCCGGGCAAGCCGACCGACAACAGCTTCATCGAGTCCTTCAACGGCA
AATTCCGGGCCGAGTGCCTGAACACGCACTGGTTCATGAGCCTTGACGACGCCCGGGCAAAAATGGAGGCTTGGCGTCAG
GACTACAATCCTGCTTCACAACACCCATCTGTCTATATGACTGTTTCGAATAAGTTTTCTTGTGCATGTGTTTGTCCTAC
AAGCTGA

Upstream 100 bases:

>100_bases
CGAAGCTGAAACGGATCGTGGCGGACCTGTCGCTCGACAAGGCGATGCTGCAAGACGTGCTGTCAAAAAAGCTCTGAGGG
CTGCGCGCAAACGCGAACTC

Downstream 100 bases:

>100_bases
CTACGCCGTGTTTTTGCCTGGCGGGCGATAAGCTTCGCTTTGTCGCTATCGAGGATATGTCGGTCGAATATCCAGGGACC
GTCAGGCAATGGGTGCGTTG

Product: transposase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MDRLQGEWKISTRRACAELQIDRSLYVYKSKRGTQAELTQRIREICATRVRYGYRRVHILLQRDGWAVNPKRIYRLYNEL
GMQLRNKVPRRRVKAKVREDRRPATHTNDIWAMDFVHDQLATGRKIRILTVIDTFSRFSPATDPRFSYRGEDVVQTLERI
CGQMGYPRSIRVDQGSEFVSRDLDLWAYQKGVVLDFSRPGKPTDNSFIESFNGKFRAECLNTHWFMSLDDARAKMEAWRQ
DYNPASQHPSVYMTVSNKFSCACVCPTS

Sequences:

>Translated_268_residues
MDRLQGEWKISTRRACAELQIDRSLYVYKSKRGTQAELTQRIREICATRVRYGYRRVHILLQRDGWAVNPKRIYRLYNEL
GMQLRNKVPRRRVKAKVREDRRPATHTNDIWAMDFVHDQLATGRKIRILTVIDTFSRFSPATDPRFSYRGEDVVQTLERI
CGQMGYPRSIRVDQGSEFVSRDLDLWAYQKGVVLDFSRPGKPTDNSFIESFNGKFRAECLNTHWFMSLDDARAKMEAWRQ
DYNPASQHPSVYMTVSNKFSCACVCPTS
>Mature_268_residues
MDRLQGEWKISTRRACAELQIDRSLYVYKSKRGTQAELTQRIREICATRVRYGYRRVHILLQRDGWAVNPKRIYRLYNEL
GMQLRNKVPRRRVKAKVREDRRPATHTNDIWAMDFVHDQLATGRKIRILTVIDTFSRFSPATDPRFSYRGEDVVQTLERI
CGQMGYPRSIRVDQGSEFVSRDLDLWAYQKGVVLDFSRPGKPTDNSFIESFNGKFRAECLNTHWFMSLDDARAKMEAWRQ
DYNPASQHPSVYMTVSNKFSCACVCPTS

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=241, Percent_Identity=27.8008298755187, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786462, Length=250, Percent_Identity=25.2, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31447; Mature: 31447

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLQGEWKISTRRACAELQIDRSLYVYKSKRGTQAELTQRIREICATRVRYGYRRVHIL
CCCCCCCEEEHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
LQRDGWAVNPKRIYRLYNELGMQLRNKVPRRRVKAKVREDRRPATHTNDIWAMDFVHDQL
EECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHH
ATGRKIRILTVIDTFSRFSPATDPRFSYRGEDVVQTLERICGQMGYPRSIRVDQGSEFVS
HCCCEEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHH
RDLDLWAYQKGVVLDFSRPGKPTDNSFIESFNGKFRAECLNTHWFMSLDDARAKMEAWRQ
HCCHHEEECCCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCEEEEEEHHHHHHHHHHHH
DYNPASQHPSVYMTVSNKFSCACVCPTS
CCCCCCCCCEEEEEECCCCEEEEECCCC
>Mature Secondary Structure
MDRLQGEWKISTRRACAELQIDRSLYVYKSKRGTQAELTQRIREICATRVRYGYRRVHIL
CCCCCCCEEEHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
LQRDGWAVNPKRIYRLYNELGMQLRNKVPRRRVKAKVREDRRPATHTNDIWAMDFVHDQL
EECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHH
ATGRKIRILTVIDTFSRFSPATDPRFSYRGEDVVQTLERICGQMGYPRSIRVDQGSEFVS
HCCCEEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHH
RDLDLWAYQKGVVLDFSRPGKPTDNSFIESFNGKFRAECLNTHWFMSLDDARAKMEAWRQ
HCCHHEEECCCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCEEEEEEHHHHHHHHHHHH
DYNPASQHPSVYMTVSNKFSCACVCPTS
CCCCCCCCCEEEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]