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The map label for this gene is pinQ [H]

Identifier: 162146869

GI number: 162146869

Start: 1065277

End: 1065789

Strand: Direct

Name: pinQ [H]

Synonym: GDI_1055

Alternate gene names: 162146869

Gene position: 1065277-1065789 (Clockwise)

Preceding gene: 162146867

Following gene: 162146871

Centisome position: 27.01

GC content: 56.14

Gene sequence:

>513_bases
TTGAAGGAACAGGAAGACGCTTTGGCGGCACTCGGTGTGCCCAAGGCCAGTATTTTCAAAGAGAAGATTTCGGGGGTCAT
CCGGTCGGACGGCCGCCCGCAGTTTGGCAGGATACTGAGGAAAATACAGTCCGGGGATGAGCTTGTAGTCATGAAGCTCG
ACCGGTTGGGTAGGTCCACCCTCGATATCCTGACGGTCATCCAGACTCTCCGCACTCAGGGTGTGGCCATCACCATTCAT
GGCGTGGGCACCATCAGGGACGACATGATGGGAAGCCTGACCATGAACCTGCTCGCATCCTTCGCAGAGTTCGAGCGTGC
CATCATTATTGACCGTACTCAGTCGGGAAGGCGCAGAGCCATAGCCAGTGGCGTAAAAATGGGACGAAAGCCCAAGCTCA
GCAAGCAGGCCCGAAAAGCCATCCGAGAACGCTATGGCAATGAGACCGGGGCACTGCTGGCCAAAGAATATGGCGTTGGT
CTGAGAACGATACAGAGGGTTGCAGCTTCGTGA

Upstream 100 bases:

>100_bases
AAAACAGCCAGAAAAGCACCGCCATAAATCCCCGCCAGAATTGCAGGGGGAAATTGGCATGAAATATGGATATTGCAGAG
TCTCGACACTGGGACAGGAT

Downstream 100 bases:

>100_bases
GCTGGTGAAGGCAGTTCCGGCTCTCACCTAATGCAATCCGAGCAATCTCAACAATGCCAAAATTCCAGCGAGCACTCCAA
GCACGACAAAAGCCTCCCAA

Product: resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKEQEDALAALGVPKASIFKEKISGVIRSDGRPQFGRILRKIQSGDELVVMKLDRLGRSTLDILTVIQTLRTQGVAITIH
GVGTIRDDMMGSLTMNLLASFAEFERAIIIDRTQSGRRRAIASGVKMGRKPKLSKQARKAIRERYGNETGALLAKEYGVG
LRTIQRVAAS

Sequences:

>Translated_170_residues
MKEQEDALAALGVPKASIFKEKISGVIRSDGRPQFGRILRKIQSGDELVVMKLDRLGRSTLDILTVIQTLRTQGVAITIH
GVGTIRDDMMGSLTMNLLASFAEFERAIIIDRTQSGRRRAIASGVKMGRKPKLSKQARKAIRERYGNETGALLAKEYGVG
LRTIQRVAAS
>Mature_170_residues
MKEQEDALAALGVPKASIFKEKISGVIRSDGRPQFGRILRKIQSGDELVVMKLDRLGRSTLDILTVIQTLRTQGVAITIH
GVGTIRDDMMGSLTMNLLASFAEFERAIIIDRTQSGRRRAIASGVKMGRKPKLSKQARKAIRERYGNETGALLAKEYGVG
LRTIQRVAAS

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787827, Length=163, Percent_Identity=33.1288343558282, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1787638, Length=163, Percent_Identity=32.5153374233129, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787404, Length=133, Percent_Identity=36.0902255639098, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 18679; Mature: 18679

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQEDALAALGVPKASIFKEKISGVIRSDGRPQFGRILRKIQSGDELVVMKLDRLGRST
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEHHHHCCHH
LDILTVIQTLRTQGVAITIHGVGTIRDDMMGSLTMNLLASFAEFERAIIIDRTQSGRRRA
HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
IASGVKMGRKPKLSKQARKAIRERYGNETGALLAKEYGVGLRTIQRVAAS
HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MKEQEDALAALGVPKASIFKEKISGVIRSDGRPQFGRILRKIQSGDELVVMKLDRLGRST
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEHHHHCCHH
LDILTVIQTLRTQGVAITIHGVGTIRDDMMGSLTMNLLASFAEFERAIIIDRTQSGRRRA
HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
IASGVKMGRKPKLSKQARKAIRERYGNETGALLAKEYGVGLRTIQRVAAS
HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]