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The map label for this gene is b0502; [C]

Identifier: 162146826

GI number: 162146826

Start: 1022770

End: 1023795

Strand: Reverse

Name: b0502; [C]

Synonym: GDI_1008

Alternate gene names: 162146826

Gene position: 1023795-1022770 (Counterclockwise)

Preceding gene: 162146828

Following gene: 162146823

Centisome position: 25.96

GC content: 61.01

Gene sequence:

>1026_bases
CTGCTGGAACTATCGAAGCAACTGGGCAACGTCTCCCAGGCCTGCAAGATGATGGGGTATTCGCGCGACAGCTTCTACCG
CTTCAAGGAGCTCTACGACAAAGGCGGCGAAATCGCTGCTCCAGGAACTCTCCCGCCGCAAACCCTTGCTTCGAAAACCG
CGTCGAGCCGGCGGTTGATGAAGCTGTGGTCGCGATCGCCATCGAACAACCGGCCTGGTGTGCCAGGCCCCCGTGGCCAA
CGGAATCTGCTCAAGCGCGGCGTCAACAGCCCTCACACACGGGTGCGCAGCATCTGGCTGCGCCACGACCTCGCTACCAT
GAAGCTCCGCCTCAAGGCGCTCGAAGCCAAGATGGCCCAGGAACGGCTGATCCTCACCGAAAGCCAGCTTGCGGCCCTGG
AGAAGGCCAAGGCCGACAAGGAGGCCTGGGGCGAGTTCGAGACCGAATGTCCCGGCTATTGCGGCGCTCAGGATACCTTC
TATGTCGGCACCCTGAAGGGCGTCGGTCGCGTCTACCAGCAGACCTTCGTCGATACCTACAGCAAGGTCGGCTTCGCCAA
GCTCTATGACCGCAAGACCCCGGTTACCGCTGCCGACCTGCTCAACGACCGCGTCATCCCCTTCTTCGAGCTGCACGATC
TCCCGCTCCAGCGCGTGCTGACCGACCGGGGCACCGAATTCTGCGGCTCTCATGACCGCCATGAATACGAACTCTATCTG
GCGGTGGAGAACATCGACCATACCCGCACCAAGGCGCGCAGCCCGCAGACCAACGGCATCGTCGAGCGCTTCCACAAGAC
CATGCTCGACGAGTTCTATCGTGTCACTTTTCGCCGCAAGATCTACGACAGCATCCACGAACTCCAGGCAGACCTCGACG
AATGGATGGATGACTTCAACCGCAATCGCACCCACCAGGGACGATACTGCTTCGGCAAAACCCCGATGCAAACCTTCCTT
GACGCAGCCCACCACGCCCGCGAAAAAGATATCGGGCGCCACGTCGAACACCACATGAACGCGTAG

Upstream 100 bases:

>100_bases
GCGGCGGGGGCGGAGTGGCCGGGCGACGCAGCCCCCGCCGCAGCCATCGGAGGATATCCTCATGACCCGTGACCAGAAGA
TCATCCGCGCCAAAGTTGGC

Downstream 100 bases:

>100_bases
CATCCACGCCGGCCACTTCAAGCCGTCCGTCAGATTAAGTGCAAACTTCTACACTTCAAGGTGGAATAGGCTTGGGCGGC
GATTGTGATACCAAATCCCG

Product: integrase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; ISDvu4 Transposase; Integrase Family Protein; Transposase ISSod; Transposase And Inactivated Derivatives; Transposase Fragment; ISSod13 Transposase; Integrase; Transposase For Tn; Integrase Catalytic Domain-Containing Protein

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLELSKQLGNVSQACKMMGYSRDSFYRFKELYDKGGEIAAPGTLPPQTLASKTASSRRLMKLWSRSPSNNRPGVPGPRGQ
RNLLKRGVNSPHTRVRSIWLRHDLATMKLRLKALEAKMAQERLILTESQLAALEKAKADKEAWGEFETECPGYCGAQDTF
YVGTLKGVGRVYQQTFVDTYSKVGFAKLYDRKTPVTAADLLNDRVIPFFELHDLPLQRVLTDRGTEFCGSHDRHEYELYL
AVENIDHTRTKARSPQTNGIVERFHKTMLDEFYRVTFRRKIYDSIHELQADLDEWMDDFNRNRTHQGRYCFGKTPMQTFL
DAAHHAREKDIGRHVEHHMNA

Sequences:

>Translated_341_residues
MLELSKQLGNVSQACKMMGYSRDSFYRFKELYDKGGEIAAPGTLPPQTLASKTASSRRLMKLWSRSPSNNRPGVPGPRGQ
RNLLKRGVNSPHTRVRSIWLRHDLATMKLRLKALEAKMAQERLILTESQLAALEKAKADKEAWGEFETECPGYCGAQDTF
YVGTLKGVGRVYQQTFVDTYSKVGFAKLYDRKTPVTAADLLNDRVIPFFELHDLPLQRVLTDRGTEFCGSHDRHEYELYL
AVENIDHTRTKARSPQTNGIVERFHKTMLDEFYRVTFRRKIYDSIHELQADLDEWMDDFNRNRTHQGRYCFGKTPMQTFL
DAAHHAREKDIGRHVEHHMNA
>Mature_341_residues
MLELSKQLGNVSQACKMMGYSRDSFYRFKELYDKGGEIAAPGTLPPQTLASKTASSRRLMKLWSRSPSNNRPGVPGPRGQ
RNLLKRGVNSPHTRVRSIWLRHDLATMKLRLKALEAKMAQERLILTESQLAALEKAKADKEAWGEFETECPGYCGAQDTF
YVGTLKGVGRVYQQTFVDTYSKVGFAKLYDRKTPVTAADLLNDRVIPFFELHDLPLQRVLTDRGTEFCGSHDRHEYELYL
AVENIDHTRTKARSPQTNGIVERFHKTMLDEFYRVTFRRKIYDSIHELQADLDEWMDDFNRNRTHQGRYCFGKTPMQTFL
DAAHHAREKDIGRHVEHHMNA

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39344; Mature: 39344

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELSKQLGNVSQACKMMGYSRDSFYRFKELYDKGGEIAAPGTLPPQTLASKTASSRRLM
CCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH
KLWSRSPSNNRPGVPGPRGQRNLLKRGVNSPHTRVRSIWLRHDLATMKLRLKALEAKMAQ
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLILTESQLAALEKAKADKEAWGEFETECPGYCGAQDTFYVGTLKGVGRVYQQTFVDTY
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH
SKVGFAKLYDRKTPVTAADLLNDRVIPFFELHDLPLQRVLTDRGTEFCGSHDRHEYELYL
HHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHCCCCCCCEEEEEE
AVENIDHTRTKARSPQTNGIVERFHKTMLDEFYRVTFRRKIYDSIHELQADLDEWMDDFN
EEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNRTHQGRYCFGKTPMQTFLDAAHHAREKDIGRHVEHHMNA
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLELSKQLGNVSQACKMMGYSRDSFYRFKELYDKGGEIAAPGTLPPQTLASKTASSRRLM
CCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH
KLWSRSPSNNRPGVPGPRGQRNLLKRGVNSPHTRVRSIWLRHDLATMKLRLKALEAKMAQ
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLILTESQLAALEKAKADKEAWGEFETECPGYCGAQDTFYVGTLKGVGRVYQQTFVDTY
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH
SKVGFAKLYDRKTPVTAADLLNDRVIPFFELHDLPLQRVLTDRGTEFCGSHDRHEYELYL
HHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHCCCCCCCEEEEEE
AVENIDHTRTKARSPQTNGIVERFHKTMLDEFYRVTFRRKIYDSIHELQADLDEWMDDFN
EEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNRTHQGRYCFGKTPMQTFLDAAHHAREKDIGRHVEHHMNA
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA