Click here to switch to the map view.

The map label for this gene is nmoT [H]

Identifier: 162146808

GI number: 162146808

Start: 1005431

End: 1006963

Strand: Direct

Name: nmoT [H]

Synonym: GDI_0990

Alternate gene names: 162146808

Gene position: 1005431-1006963 (Clockwise)

Preceding gene: 162146807

Following gene: 162146809

Centisome position: 25.49

GC content: 66.41

Gene sequence:

>1533_bases
GTGATCAGCATGGAGTTATCGAGTGTGATCCGTCGGTGGCATTACCGGGAACATCTGCCGATCCGCGAGATCGAGCGGCG
GACGAAGCTGTCGCGCAACACGATCCGCAAATATCTGCGGGCGGAGACGGGGGAAGTGAAGTTCAAGGTTCCGGAGCGTC
CGAGCCGTCTGGACCCGTTTTCCGAGAAGCTGAGGGGCTGGCTGTTTCTGGAGGCGGCGAAGTCGCGCAAGCAGCGCCGC
ACGGGGCGCTGCCTTCATGCCGATCTTGTAGCGCTGGGTTATGACGGTTCTTATGGCCGCGTAGCCGCGTTCATCCGGGA
CTGGAAGACGGAGCGGCAACAGGCGAAGCAGACGACGGGGCGCGGGGTGTTCGTTCCCCTGCGCTTTGCGCCCGGAGAGG
CATTCCAGTTCGACTGGGGCGAGGACTGGGCGACAATCGGCGGTCGGCGCATCAAGCTGCAAGTCGCCCACAGCAAGCTG
TCCTACAGCCGGGCGTTCATCCTGCGGGCCTATCCGCTGCAGACCCACGAGATGCTGTTCGACGCGCTGGGCGAGGCGTT
CCGCGCGCTTGGCGGCGTTCCGCGCCGGGGCATCTTCGACAACATGAAGACTGCGGTGGACCGGGTCGGTCCGGGCAAGG
CACGCCAGGTCAATCTGCGCTTCTCGGCGATGGTGAGCCATTACCTGTTCGAGGCGGAATTCTGCAATCCGGCGGCAGGC
TGGGAAAAGGGGCAAATCGAGAAGACCGTCCAGGACGCGCGGCGGCAGATTTGGCAGGAGATGCCGCATTTTCCCGATCT
GCCCGCGCTGAACGCCTGGCTCGAGACGCGGTGCGTGGCGCGCTGGGCCGAGCTGCGGCATGTCGAACTGCCCGGCAGCA
TCGCCGAGATGCACGCGGCGGAGGTGCCGCACCTGATGGTCTTTGGCCGCCCGTTCGACGGGTTCGTCGAGCACGCCAAG
CGGGTCGGGCCGACCTGCCTCGTGCAGTTCGAGACCAATCGTTACAGCGTGCCGGCTTCCTTTGCCAATCGGCCGGTCAG
TCTGCGCGTCTACCACGACCGGCTGGTGATCGCCGCCGAGGGGCGGATCCTGTGCGAGCATCGCCGGATCGTCGAGCGGT
CCCACGGCGTGCCGGGCCGCACGGTCTATGACTGGCGGCATTACCTGGCGGTGATCCAGCGCAAACCGGGCGCATTGCGC
AACGGCGCACCGTTCGCCGAATTGCCCGGGGCGTTCCGTACCTTGCAAGCGCATCTGCTCCGGCGCGCCGGGGGCGGCCG
CGAGATGGCGGAGATCCTGGCCCTGGTGCTGCATCATGACGAGCAGGCCGTGCTCTGTGCGATCGAACTCGCGCTCGAGG
AGGGGGTGGCCACAAAGACCCATGTCCTCAACACGCTGCATCGCCTGACGGACGCCAAGAAGACGGGAGCCTCCAGGCTC
GACGCGCCACAGGCGCTGGTGCTCGAATGCGAGCCCCGGGCCGATACCGGACGGTATGACGCGCTGCGCGGGGAGGCTCG
CCATGCGTCATGA

Upstream 100 bases:

>100_bases
TGCGTTGAGAAGTGACCCTTTAGGGGCGGTAATTTTCATTGAGATTTGACCCGTGTCTGACCCCTGGCCCCGGCGCGAAC
GAGCGAGGGGTTTTCAAGGA

Downstream 100 bases:

>100_bases
CCCCGCGGCGGGAGCCCTGATCGTCATGCTGCGCGGCCTGCGGATGTATGGCATGGCCCAGGCCACCGCCGAACTGACGG
AGCAGGGCGCGCCGGCGTTC

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MISMELSSVIRRWHYREHLPIREIERRTKLSRNTIRKYLRAETGEVKFKVPERPSRLDPFSEKLRGWLFLEAAKSRKQRR
TGRCLHADLVALGYDGSYGRVAAFIRDWKTERQQAKQTTGRGVFVPLRFAPGEAFQFDWGEDWATIGGRRIKLQVAHSKL
SYSRAFILRAYPLQTHEMLFDALGEAFRALGGVPRRGIFDNMKTAVDRVGPGKARQVNLRFSAMVSHYLFEAEFCNPAAG
WEKGQIEKTVQDARRQIWQEMPHFPDLPALNAWLETRCVARWAELRHVELPGSIAEMHAAEVPHLMVFGRPFDGFVEHAK
RVGPTCLVQFETNRYSVPASFANRPVSLRVYHDRLVIAAEGRILCEHRRIVERSHGVPGRTVYDWRHYLAVIQRKPGALR
NGAPFAELPGAFRTLQAHLLRRAGGGREMAEILALVLHHDEQAVLCAIELALEEGVATKTHVLNTLHRLTDAKKTGASRL
DAPQALVLECEPRADTGRYDALRGEARHAS

Sequences:

>Translated_510_residues
MISMELSSVIRRWHYREHLPIREIERRTKLSRNTIRKYLRAETGEVKFKVPERPSRLDPFSEKLRGWLFLEAAKSRKQRR
TGRCLHADLVALGYDGSYGRVAAFIRDWKTERQQAKQTTGRGVFVPLRFAPGEAFQFDWGEDWATIGGRRIKLQVAHSKL
SYSRAFILRAYPLQTHEMLFDALGEAFRALGGVPRRGIFDNMKTAVDRVGPGKARQVNLRFSAMVSHYLFEAEFCNPAAG
WEKGQIEKTVQDARRQIWQEMPHFPDLPALNAWLETRCVARWAELRHVELPGSIAEMHAAEVPHLMVFGRPFDGFVEHAK
RVGPTCLVQFETNRYSVPASFANRPVSLRVYHDRLVIAAEGRILCEHRRIVERSHGVPGRTVYDWRHYLAVIQRKPGALR
NGAPFAELPGAFRTLQAHLLRRAGGGREMAEILALVLHHDEQAVLCAIELALEEGVATKTHVLNTLHRLTDAKKTGASRL
DAPQALVLECEPRADTGRYDALRGEARHAS
>Mature_510_residues
MISMELSSVIRRWHYREHLPIREIERRTKLSRNTIRKYLRAETGEVKFKVPERPSRLDPFSEKLRGWLFLEAAKSRKQRR
TGRCLHADLVALGYDGSYGRVAAFIRDWKTERQQAKQTTGRGVFVPLRFAPGEAFQFDWGEDWATIGGRRIKLQVAHSKL
SYSRAFILRAYPLQTHEMLFDALGEAFRALGGVPRRGIFDNMKTAVDRVGPGKARQVNLRFSAMVSHYLFEAEFCNPAAG
WEKGQIEKTVQDARRQIWQEMPHFPDLPALNAWLETRCVARWAELRHVELPGSIAEMHAAEVPHLMVFGRPFDGFVEHAK
RVGPTCLVQFETNRYSVPASFANRPVSLRVYHDRLVIAAEGRILCEHRRIVERSHGVPGRTVYDWRHYLAVIQRKPGALR
NGAPFAELPGAFRTLQAHLLRRAGGGREMAEILALVLHHDEQAVLCAIELALEEGVATKTHVLNTLHRLTDAKKTGASRL
DAPQALVLECEPRADTGRYDALRGEARHAS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 58104; Mature: 58104

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMELSSVIRRWHYREHLPIREIERRTKLSRNTIRKYLRAETGEVKFKVPERPSRLDPF
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH
SEKLRGWLFLEAAKSRKQRRTGRCLHADLVALGYDGSYGRVAAFIRDWKTERQQAKQTTG
HHHHHHEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
RGVFVPLRFAPGEAFQFDWGEDWATIGGRRIKLQVAHSKLSYSRAFILRAYPLQTHEMLF
CEEEEEEEECCCCCEECCCCCCHHHCCCEEEEEEEECCHHHHHHEEEEEECCCCHHHHHH
DALGEAFRALGGVPRRGIFDNMKTAVDRVGPGKARQVNLRFSAMVSHYLFEAEFCNPAAG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCC
WEKGQIEKTVQDARRQIWQEMPHFPDLPALNAWLETRCVARWAELRHVELPGSIAEMHAA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
EVPHLMVFGRPFDGFVEHAKRVGPTCLVQFETNRYSVPASFANRPVSLRVYHDRLVIAAE
CCCEEEEECCCCHHHHHHHHHCCCEEEEEEECCCEECCHHHCCCCEEEEEEECEEEEEEC
GRILCEHRRIVERSHGVPGRTVYDWRHYLAVIQRKPGALRNGAPFAELPGAFRTLQAHLL
CCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHH
RRAGGGREMAEILALVLHHDEQAVLCAIELALEEGVATKTHVLNTLHRLTDAKKTGASRL
HHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
DAPQALVLECEPRADTGRYDALRGEARHAS
CCCCEEEEEECCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MISMELSSVIRRWHYREHLPIREIERRTKLSRNTIRKYLRAETGEVKFKVPERPSRLDPF
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH
SEKLRGWLFLEAAKSRKQRRTGRCLHADLVALGYDGSYGRVAAFIRDWKTERQQAKQTTG
HHHHHHEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
RGVFVPLRFAPGEAFQFDWGEDWATIGGRRIKLQVAHSKLSYSRAFILRAYPLQTHEMLF
CEEEEEEEECCCCCEECCCCCCHHHCCCEEEEEEEECCHHHHHHEEEEEECCCCHHHHHH
DALGEAFRALGGVPRRGIFDNMKTAVDRVGPGKARQVNLRFSAMVSHYLFEAEFCNPAAG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCC
WEKGQIEKTVQDARRQIWQEMPHFPDLPALNAWLETRCVARWAELRHVELPGSIAEMHAA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
EVPHLMVFGRPFDGFVEHAKRVGPTCLVQFETNRYSVPASFANRPVSLRVYHDRLVIAAE
CCCEEEEECCCCHHHHHHHHHCCCEEEEEEECCCEECCHHHCCCCEEEEEEECEEEEEEC
GRILCEHRRIVERSHGVPGRTVYDWRHYLAVIQRKPGALRNGAPFAELPGAFRTLQAHLL
CCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHH
RRAGGGREMAEILALVLHHDEQAVLCAIELALEEGVATKTHVLNTLHRLTDAKKTGASRL
HHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
DAPQALVLECEPRADTGRYDALRGEARHAS
CCCCEEEEEECCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]