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The map label for this gene is intS [C]

Identifier: 162146787

GI number: 162146787

Start: 988347

End: 988523

Strand: Direct

Name: intS [C]

Synonym: GDI_0969

Alternate gene names: 162146787

Gene position: 988347-988523 (Clockwise)

Preceding gene: 162146786

Following gene: 162146788

Centisome position: 25.06

GC content: 50.85

Gene sequence:

>177_bases
ATGCTGACAGATACAGCGATCAAAACCGCAGAGGCCCAAGATAAGGCCTTCAGGCTGGCAGATAGCGAGGGGCTGTTTAT
CCATGTGCCTATGGGCAAGAAGTTCTGGTTCATGCCCTACAGACCCTCAGTGGGTAAAAAGCAGAAGCTGACCTTTGGGC
CATATCCGCTACATTAA

Upstream 100 bases:

>100_bases
CACTCGTCCGGGAAGGACGCGCCGATGCCGTCCGACGTTACCTGGATCGTATTGCAACCGGCGGTTACGCGTGAGGTTTA
GCGGACGGGTAACAGATATG

Downstream 100 bases:

>100_bases
TGCGCTCGGGAAAGGGCAGAATTTTCATTAGGATGCTGTGTCACCCCCTACCTTCCGTTCGTTGGGCGATTTGCGTGGTG
ATTAAAAATTTGGCATTTAT

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MLTDTAIKTAEAQDKAFRLADSEGLFIHVPMGKKFWFMPYRPSVGKKQKLTFGPYPLH

Sequences:

>Translated_58_residues
MLTDTAIKTAEAQDKAFRLADSEGLFIHVPMGKKFWFMPYRPSVGKKQKLTFGPYPLH
>Mature_58_residues
MLTDTAIKTAEAQDKAFRLADSEGLFIHVPMGKKFWFMPYRPSVGKKQKLTFGPYPLH

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6642; Mature: 6642

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDTAIKTAEAQDKAFRLADSEGLFIHVPMGKKFWFMPYRPSVGKKQKLTFGPYPLH
CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MLTDTAIKTAEAQDKAFRLADSEGLFIHVPMGKKFWFMPYRPSVGKKQKLTFGPYPLH
CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA