| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yjeS [H]
Identifier: 162146700
GI number: 162146700
Start: 894522
End: 895595
Strand: Direct
Name: yjeS [H]
Synonym: GDI_0878
Alternate gene names: 162146700
Gene position: 894522-895595 (Clockwise)
Preceding gene: 162146699
Following gene: 162146701
Centisome position: 22.68
GC content: 70.86
Gene sequence:
>1074_bases ATGGAGGGCGGCCTGCCGCCCGGAAGAGCTGCCATCCTGCGCGATGCGATTCGCGACAGGGCCCTGGCGCTGGGGTTCGA TGCGGTGGGCTTCTGCGAGGCCGCGCTGGGGGACGAGGCCCGGGCGCGGCTGGCCGATTTCCTGGCGGCCGGGCATCACG GGTCCATGGGCTGGCTGGCCGAGCGGTCGGCGCAGCGCGGCGACCCGCGCGCCTTGTGGCCCGAGGCGCGCAGCGTGATC GCGCTGGGCCTGTCCTACGCGCCCGGCACGGACGCGCTGGCCACCGTGGGCCGGGCGGATCGGGGCAATATCTCGGTCTA TGCGCGCAATCGCGACTATCACGATGTGGTCAAGGGCATGCTGAAGCATGTGGCGCAGTTCGTAGTGGCCGAGGGCGCGC GCGCGGGCGCCGCGACCGGGGTCAAGGTTTTCGTCGATACCGCCCCGGTGCTGGAAAAGCCGCTGGCCGAACGGGCGGGC CTGGGCTGGCAGGGCAAGCACACCAACCTGGTGTCCCGCCGTCACGGAAGCTGGCTGCTTCTGGGTGAAATCTATACGAC CCTGGCCCTGCCGCGCACCGACCCGTCGGGCGGGGGGTGCGGCACTTGCCGCCGCTGCCTGGACGCATGCCCGACCAACG CGTTCCCCGAACCCTACCGGATGGATGCGCGGCGGTGCATTTCCTACCTGACGATCGAAAATCCCGGCCCGATCCCGCTG GAATTCCGGGCGGCGATGGGCAACCGGATCTATGGTTGCGATGATTGCCTGGCCGTATGCCCGTGGAACCGCTTCGCCAC CGCGTCGCGGCAGATGAAGCTGCAGGCCCGCGACGACCTGACGGCGCCTCGGTTGGGGGCGCTGGCCCGGCTGGACGATG CGGCGTTTCGCGCCCTGTTCTCCGGTTCGCCGGTCAAGCGGATCGGCCGCGACCGCTTCGTGCGTAATGTGCTGGTCGCC ATCGGCAATTCGGGGCTGGCGGCCCTGCGCCCGGTGGCGCAGGATCTGTGCGGCGATCCCGACCCGGTGGTGGCCGAGGC CGCGCGTTGGGCCGTGGAACGGTTGCCGTCATGA
Upstream 100 bases:
>100_bases GCACGCTGGGTGCCCACGCCGCCGGATTGCGCGCCGAATGGGCCATGGAAGACTGGACGCCCGACGAGATGCCGCCCCCC GACCTTCCCCCGGTCCCGTG
Downstream 100 bases:
>100_bases CGGGCGACCGGATCCTGGTCAAGCGTAGCCTGGTCCTGTCCGGCCATCGCACCAGCGTGGCGCTGGAGCCCGAATTCTGG TCGGCTCTGGAGGAGATGGC
Product: electron transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLAERSAQRGDPRALWPEARSVI ALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGMLKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAG LGWQGKHTNLVSRRHGSWLLLGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALFSGSPVKRIGRDRFVRNVLVA IGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS
Sequences:
>Translated_357_residues MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLAERSAQRGDPRALWPEARSVI ALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGMLKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAG LGWQGKHTNLVSRRHGSWLLLGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALFSGSPVKRIGRDRFVRNVLVA IGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS >Mature_357_residues MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLAERSAQRGDPRALWPEARSVI ALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGMLKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAG LGWQGKHTNLVSRRHGSWLLLGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALFSGSPVKRIGRDRFVRNVLVA IGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=341, Percent_Identity=39.5894428152493, Blast_Score=260, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 38308; Mature: 38308
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLA CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHH ERSAQRGDPRALWPEARSVIALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGM HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHH LKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAGLGWQGKHTNLVSRRHGSWLL HHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEE LGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCE EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALF EEHHHHCCCCCCCCHHHHHCCCHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHH SGSPVKRIGRDRFVRNVLVAIGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLA CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHH ERSAQRGDPRALWPEARSVIALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGM HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHH LKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAGLGWQGKHTNLVSRRHGSWLL HHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEE LGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCE EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALF EEHHHHCCCCCCCCHHHHHCCCHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHH SGSPVKRIGRDRFVRNVLVAIGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]