| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is dps [C]
Identifier: 162146648
GI number: 162146648
Start: 845446
End: 845991
Strand: Reverse
Name: dps [C]
Synonym: GDI_0826
Alternate gene names: 162146648
Gene position: 845991-845446 (Counterclockwise)
Preceding gene: 162146651
Following gene: 162146647
Centisome position: 21.45
GC content: 62.09
Gene sequence:
>546_bases ATGACAAACAAGACGACACCTTCCGAAGCCGGTACAGCCCACGCCCATACCTATCTGGGAACACCGACGGACCTGAAGCA CGACGCCGTCCACAAGATCTCGGCCGGCCTGAAGGCGGTCCTGGCGGATGTCTTCGCCCTCTATATCAAGACGAAGAACT TCCACTGGCACATGAGCGGGCGGCATTTCCGCGATTATCACCTTCTGCTGGACGAGCAGAGCAGCCAGATCTTCGCCATG ACGGACCCGCTGGCCGAACGAGCGCGGAAGATCGGCGGCACGACCCTGCACTCGGTGGGGGAAATCAGCCGGCTGACCAA GGTGTCGGACAACGATGCGATCTATGTCACGCCCGAGGACATGCTGTCCGAACTGCGCGAGGACAACCTGGCCCTGACGG CCCGCATGCGCGCCGTCCATGCCGTATGCGACGAAGGCAACGATGTCGCGACGGCCAGCCTGCTGGAAAACTGGATCGAC GAGACCGAGCGCCGCACCTGGTTCCTGTTCGAATCCACCCGACCGGCCTTCGGCAGCAATAGCTGA
Upstream 100 bases:
>100_bases CCCCTGATGCATATCCCCCATGCGCCTGCCGCCCACGCCTTGTAATGGGCATCCGGGACGTCCACCTCAGCATGGCACCA TACGTTCCAGGGAGATCGTA
Downstream 100 bases:
>100_bases CGCGCCGCCCATATCCGATCATCAGGAAAGGCAGTGTCATCACTGCCTTTTTTGGTATCCAGGCCGAGGGTCATCCGAAG CGGGAGGAAAGATCGGCATG
Product: Ferritin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTNKTTPSEAGTAHAHTYLGTPTDLKHDAVHKISAGLKAVLADVFALYIKTKNFHWHMSGRHFRDYHLLLDEQSSQIFAM TDPLAERARKIGGTTLHSVGEISRLTKVSDNDAIYVTPEDMLSELREDNLALTARMRAVHAVCDEGNDVATASLLENWID ETERRTWFLFESTRPAFGSNS
Sequences:
>Translated_181_residues MTNKTTPSEAGTAHAHTYLGTPTDLKHDAVHKISAGLKAVLADVFALYIKTKNFHWHMSGRHFRDYHLLLDEQSSQIFAM TDPLAERARKIGGTTLHSVGEISRLTKVSDNDAIYVTPEDMLSELREDNLALTARMRAVHAVCDEGNDVATASLLENWID ETERRTWFLFESTRPAFGSNS >Mature_180_residues TNKTTPSEAGTAHAHTYLGTPTDLKHDAVHKISAGLKAVLADVFALYIKTKNFHWHMSGRHFRDYHLLLDEQSSQIFAMT DPLAERARKIGGTTLHSVGEISRLTKVSDNDAIYVTPEDMLSELREDNLALTARMRAVHAVCDEGNDVATASLLENWIDE TERRTWFLFESTRPAFGSNS
Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 20257; Mature: 20126
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKTTPSEAGTAHAHTYLGTPTDLKHDAVHKISAGLKAVLADVFALYIKTKNFHWHMSG CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC RHFRDYHLLLDEQSSQIFAMTDPLAERARKIGGTTLHSVGEISRLTKVSDNDAIYVTPED CCCCEEEEEEECCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECHHH MLSELREDNLALTARMRAVHAVCDEGNDVATASLLENWIDETERRTWFLFESTRPAFGSN HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC S C >Mature Secondary Structure TNKTTPSEAGTAHAHTYLGTPTDLKHDAVHKISAGLKAVLADVFALYIKTKNFHWHMSG CCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC RHFRDYHLLLDEQSSQIFAMTDPLAERARKIGGTTLHSVGEISRLTKVSDNDAIYVTPED CCCCEEEEEEECCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECHHH MLSELREDNLALTARMRAVHAVCDEGNDVATASLLENWIDETERRTWFLFESTRPAFGSN HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]