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The map label for this gene is tolR [H]

Identifier: 162146626

GI number: 162146626

Start: 821823

End: 822266

Strand: Direct

Name: tolR [H]

Synonym: GDI_0804

Alternate gene names: 162146626

Gene position: 821823-822266 (Clockwise)

Preceding gene: 162146625

Following gene: 162146627

Centisome position: 20.84

GC content: 68.69

Gene sequence:

>444_bases
ATGGGCGTTTCGCTCGGTGGAGGGGGTGGGCGCCGCGGGCGCCGGCGTCCCATGTCGGACATCAACGTCACCCCCCTGGT
GGACGTCATGCTGGTGCTGCTCATCATCTTCATGGTGACGGCGCCGATGATGACCAGCGGCGTGAATGTCGACCTGCCGA
AAACCGACGCGGCGCCGGTCAATGCCGACACCAAGCCGATCACCGTGTCCATCCGCTCGGACGGCGCGCTGTACCTGGGT
GACAACCCGGTCTCGTCCGACCAACTCGTGGACCAGTTGCGCGCGGCGGCGCAGAACGACCCCGCGCACCGGATCTTCGT
CCGTGGCGATTCCCACATCGATTACGGCCGCGTGATGGAAGTGATGGGCCGGATCACGGCGGGCGGCTTCACCCACGTCG
CCCTCCTGGCCCAGCAGCCGCCGTCCGGCGGCGGCGCGCCCTGA

Upstream 100 bases:

>100_bases
CATCAACAACAGCCTGTCTCTGTTCGAGGACCGCATGGCGGCGTTCGGGACCGAATTCGCCGCCATCCTCTCTCGCCAGT
CCGAGGAAAGGGGCTGAATC

Downstream 100 bases:

>100_bases
TCGCGCCCCCCTTGATCGTCATCGGCTAGGAGCATCCTCGTCGTGGTTCAGCCGCGCCGTTCCGAACGTATCCTGATGCG
GCGATCGATCGTCGTGTCGG

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MGVSLGGGGGRRGRRRPMSDINVTPLVDVMLVLLIIFMVTAPMMTSGVNVDLPKTDAAPVNADTKPITVSIRSDGALYLG
DNPVSSDQLVDQLRAAAQNDPAHRIFVRGDSHIDYGRVMEVMGRITAGGFTHVALLAQQPPSGGGAP

Sequences:

>Translated_147_residues
MGVSLGGGGGRRGRRRPMSDINVTPLVDVMLVLLIIFMVTAPMMTSGVNVDLPKTDAAPVNADTKPITVSIRSDGALYLG
DNPVSSDQLVDQLRAAAQNDPAHRIFVRGDSHIDYGRVMEVMGRITAGGFTHVALLAQQPPSGGGAP
>Mature_146_residues
GVSLGGGGGRRGRRRPMSDINVTPLVDVMLVLLIIFMVTAPMMTSGVNVDLPKTDAAPVNADTKPITVSIRSDGALYLGD
NPVSSDQLVDQLRAAAQNDPAHRIFVRGDSHIDYGRVMEVMGRITAGGFTHVALLAQQPPSGGGAP

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=122, Percent_Identity=38.5245901639344, Blast_Score=103, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15404; Mature: 15273

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSLGGGGGRRGRRRPMSDINVTPLVDVMLVLLIIFMVTAPMMTSGVNVDLPKTDAAPV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NADTKPITVSIRSDGALYLGDNPVSSDQLVDQLRAAAQNDPAHRIFVRGDSHIDYGRVME
CCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
VMGRITAGGFTHVALLAQQPPSGGGAP
HHHHHCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
GVSLGGGGGRRGRRRPMSDINVTPLVDVMLVLLIIFMVTAPMMTSGVNVDLPKTDAAPV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NADTKPITVSIRSDGALYLGDNPVSSDQLVDQLRAAAQNDPAHRIFVRGDSHIDYGRVME
CCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
VMGRITAGGFTHVALLAQQPPSGGGAP
HHHHHCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]