Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

Click here to switch to the map view.

The map label for this gene is 162146599

Identifier: 162146599

GI number: 162146599

Start: 793728

End: 794414

Strand: Direct

Name: 162146599

Synonym: GDI_0777

Alternate gene names: NA

Gene position: 793728-794414 (Clockwise)

Preceding gene: 162146598

Following gene: 162146601

Centisome position: 20.12

GC content: 65.5

Gene sequence:

>687_bases
ATGGGGGCAGGGGGTCGGCGCGCACGCCGCCGGCCCGTGTCATGGGAGAATTCCATTTTGCGCACCATCCGTCATATCAT
GGCCCGCTCGGCGCTGGCCGTTGCCCTGGCCACCGGCTTCGCCTCGGTGCCCGCCCTGCACGACGTGGCGTTCGCCGCCG
CGCCGGGGCCCAATGACCCGCTGAAGCTGAAATCGGTGGTCGTGACCGGCAACAAGCAGGTCTCGACGGAGGACATCCTG
GCCGCCGTTCCCTTCCATGTGGGGGACACCGTCACCCGCAACCAGATCGCAGCCGCCATGCAGGACGTCATGGCCGTCTA
CCAGAAGAAGAATGTCGGCCTGAAACTGGGCGGCAGGACGAAATTCGCGGGCAAGGCGGTCTATGTCCAGTGGGTCATCG
AGGAACAGGCCCCGGGAACCGAAACCGAAACCCATGTCGGCCTGGTCGTCGACAAGATCGTCTTCGAGGGCAACAAGAAG
GTTTCCACCGCCGACCTGACGGCGGCGACGGCCCTGCGTCCGGGTTCGGCGATCACCCAGGCCACGATGGCCGCCGATCA
GGAAGCCGTCCAGAAGCTGTACCAGAAGCGTGATATCAGCGCGTCGGTCCAGGTCGTGCCGGCCCAGAAGCCGGGCGACA
GCCACGTGACCCTGACCTATCAGATCAACGAAAAGGCGGGCGACTGA

Upstream 100 bases:

>100_bases
TGATGCCGGCCTTGCCGGCAACGTCGCCACGATCCCCGACCGGGCGCTCTTCTAGAACCGGGCCGCGGCCATCATTGGCA
TTGCCCGGAAGGTGTGCATC

Downstream 100 bases:

>100_bases
CCCGAAGGTCCCCGCCACCGGCGGGGACCACCCACCCGGTCGAACGGGCGGTTATATATGGGTGGTGGCGGCCGAAGGCC
GGTTCAGCATCGCCATCAGT

Product: surface antigen protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MGAGGRRARRRPVSWENSILRTIRHIMARSALAVALATGFASVPALHDVAFAAAPGPNDPLKLKSVVVTGNKQVSTEDIL
AAVPFHVGDTVTRNQIAAAMQDVMAVYQKKNVGLKLGGRTKFAGKAVYVQWVIEEQAPGTETETHVGLVVDKIVFEGNKK
VSTADLTAATALRPGSAITQATMAADQEAVQKLYQKRDISASVQVVPAQKPGDSHVTLTYQINEKAGD

Sequences:

>Translated_228_residues
MGAGGRRARRRPVSWENSILRTIRHIMARSALAVALATGFASVPALHDVAFAAAPGPNDPLKLKSVVVTGNKQVSTEDIL
AAVPFHVGDTVTRNQIAAAMQDVMAVYQKKNVGLKLGGRTKFAGKAVYVQWVIEEQAPGTETETHVGLVVDKIVFEGNKK
VSTADLTAATALRPGSAITQATMAADQEAVQKLYQKRDISASVQVVPAQKPGDSHVTLTYQINEKAGD
>Mature_227_residues
GAGGRRARRRPVSWENSILRTIRHIMARSALAVALATGFASVPALHDVAFAAAPGPNDPLKLKSVVVTGNKQVSTEDILA
AVPFHVGDTVTRNQIAAAMQDVMAVYQKKNVGLKLGGRTKFAGKAVYVQWVIEEQAPGTETETHVGLVVDKIVFEGNKKV
STADLTAATALRPGSAITQATMAADQEAVQKLYQKRDISASVQVVPAQKPGDSHVTLTYQINEKAGD

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24237; Mature: 24106

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGGRRARRRPVSWENSILRTIRHIMARSALAVALATGFASVPALHDVAFAAAPGPNDP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCC
LKLKSVVVTGNKQVSTEDILAAVPFHVGDTVTRNQIAAAMQDVMAVYQKKNVGLKLGGRT
EEEEEEEEECCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
KFAGKAVYVQWVIEEQAPGTETETHVGLVVDKIVFEGNKKVSTADLTAATALRPGSAITQ
CCCCCEEEEEEEEECCCCCCCCCHHHHHHEEEHHCCCCCEEEHHHHHHHHHCCCCCHHHH
ATMAADQEAVQKLYQKRDISASVQVVPAQKPGDSHVTLTYQINEKAGD
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
GAGGRRARRRPVSWENSILRTIRHIMARSALAVALATGFASVPALHDVAFAAAPGPNDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCC
LKLKSVVVTGNKQVSTEDILAAVPFHVGDTVTRNQIAAAMQDVMAVYQKKNVGLKLGGRT
EEEEEEEEECCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
KFAGKAVYVQWVIEEQAPGTETETHVGLVVDKIVFEGNKKVSTADLTAATALRPGSAITQ
CCCCCEEEEEEEEECCCCCCCCCHHHHHHEEEHHCCCCCEEEHHHHHHHHHCCCCCHHHH
ATMAADQEAVQKLYQKRDISASVQVVPAQKPGDSHVTLTYQINEKAGD
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA