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The map label for this gene is ydhJ [H]

Identifier: 162146586

GI number: 162146586

Start: 779120

End: 780151

Strand: Reverse

Name: ydhJ [H]

Synonym: GDI_0764

Alternate gene names: 162146586

Gene position: 780151-779120 (Counterclockwise)

Preceding gene: 162146587

Following gene: 162146585

Centisome position: 19.78

GC content: 67.44

Gene sequence:

>1032_bases
GTGTTCGAACGCGCCCGTCACGTCATACGGATCGCAACCACGCTGGCCATCCTGGCCATTGCGACAGTGGTGGTGCTGGG
GCTGTGGGATTACTACACGGCCGCGCCCTGGACCCGGAACGGGCAGGTGCGCGTGCAGGTCGCCAACATCGCGCCGCGCG
TATCGGGGCAGATCGTGGATGTCCGTGTCACCGACAACCAGTATGTCCATCGCGGCGATGTGCTGTACTCCATCGACCCG
TTCGATTTCCGCATCGCGGTGGCATCGGCGACGGCGCGCGTCAATGAACGCCAGGCGGACCTGACGCTGCGCCTGGCGCA
GCACCAGCGCCGGCAGCAACTGTCCTCGGCCTCGGCCTCGGCCGAGGAAAAGCAGCAGTTCGAAGCCGTGGCGGAACAGG
CCAAGGCCCAATATGCCGACGCGCTGGCCGCCCTGTCGCAGGCGCGGATGAACCTGGACCGCACGCAGGTCCGCAGCACC
GTCAACGGCTACGTCACCAACCTGACGATGCGGGTGGGCGATTTCGCCACCGCCGGCGTATCGGATATCGAGGTGATCGA
CGCGGAATCCTATTGGGTGGACGGGTATTTCGAGGAAACCCGGATGCGGGGGATCTATCCCGGCGCGCTGGTGCGGATCG
ACCTGATGGGCTACGCGACCCCGCTCTGGGGCCATGTCGAGAGCATCACGCGCGGCATATCCTCGGCCAACGCGCAACGA
TCGACCCAGGGCCTGCCCTTGGTCAACCCGGTCTATACCTGGGTACGGCTGGCGCAGCGCATTCCGGTGCGGGTGCATAT
CGACGCCCTGCCCGCCGGAATCACGCTGGCGGCGGGCATGACCGCGAGCGTTTCGATCGTCACCCCCGAGGGACGACAGC
CCCGCGTGACGCTGCGCGCGCTGGTCGCCCAGTTGCGCCAGTCGATGCACCGCGTCCGGCCGCCCAATGCGGTGGCGGCT
TCCCCCGCCACGCCTGTTCCGTCACCCACGTCCCTGTCGAACGGGGTGTCGGAGGACGGACAGGACCGCTAA

Upstream 100 bases:

>100_bases
CCTTCGTGCAGAAACGGGTCTGGAACGTGCCTCTGGCCGAATTCGGAATCCTGATCTGCCTTGTCGGATTCTATGTTTTT
CTGTTGTGAAAGGTCGGATG

Downstream 100 bases:

>100_bases
CATGGCTCATTCCATAAAAAGACAAGACCGGAGAAACGCCATGACCCGCCGTCTCGCAACCCACGCCGCCGTGCTGATGG
CCCTGTCCGCCACGGGCGCG

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFERARHVIRIATTLAILAIATVVVLGLWDYYTAAPWTRNGQVRVQVANIAPRVSGQIVDVRVTDNQYVHRGDVLYSIDP
FDFRIAVASATARVNERQADLTLRLAQHQRRQQLSSASASAEEKQQFEAVAEQAKAQYADALAALSQARMNLDRTQVRST
VNGYVTNLTMRVGDFATAGVSDIEVIDAESYWVDGYFEETRMRGIYPGALVRIDLMGYATPLWGHVESITRGISSANAQR
STQGLPLVNPVYTWVRLAQRIPVRVHIDALPAGITLAAGMTASVSIVTPEGRQPRVTLRALVAQLRQSMHRVRPPNAVAA
SPATPVPSPTSLSNGVSEDGQDR

Sequences:

>Translated_343_residues
MFERARHVIRIATTLAILAIATVVVLGLWDYYTAAPWTRNGQVRVQVANIAPRVSGQIVDVRVTDNQYVHRGDVLYSIDP
FDFRIAVASATARVNERQADLTLRLAQHQRRQQLSSASASAEEKQQFEAVAEQAKAQYADALAALSQARMNLDRTQVRST
VNGYVTNLTMRVGDFATAGVSDIEVIDAESYWVDGYFEETRMRGIYPGALVRIDLMGYATPLWGHVESITRGISSANAQR
STQGLPLVNPVYTWVRLAQRIPVRVHIDALPAGITLAAGMTASVSIVTPEGRQPRVTLRALVAQLRQSMHRVRPPNAVAA
SPATPVPSPTSLSNGVSEDGQDR
>Mature_343_residues
MFERARHVIRIATTLAILAIATVVVLGLWDYYTAAPWTRNGQVRVQVANIAPRVSGQIVDVRVTDNQYVHRGDVLYSIDP
FDFRIAVASATARVNERQADLTLRLAQHQRRQQLSSASASAEEKQQFEAVAEQAKAQYADALAALSQARMNLDRTQVRST
VNGYVTNLTMRVGDFATAGVSDIEVIDAESYWVDGYFEETRMRGIYPGALVRIDLMGYATPLWGHVESITRGISSANAQR
STQGLPLVNPVYTWVRLAQRIPVRVHIDALPAGITLAAGMTASVSIVTPEGRQPRVTLRALVAQLRQSMHRVRPPNAVAA
SPATPVPSPTSLSNGVSEDGQDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=278, Percent_Identity=39.2086330935252, Blast_Score=208, Evalue=5e-55,
Organism=Escherichia coli, GI1789637, Length=308, Percent_Identity=34.0909090909091, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1790519, Length=289, Percent_Identity=28.3737024221453, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788711, Length=287, Percent_Identity=25.7839721254355, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789041, Length=270, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37555; Mature: 37555

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERARHVIRIATTLAILAIATVVVLGLWDYYTAAPWTRNGQVRVQVANIAPRVSGQIVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEE
VRVTDNQYVHRGDVLYSIDPFDFRIAVASATARVNERQADLTLRLAQHQRRQQLSSASAS
EEECCCCEEECCCEEEEECCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
AEEKQQFEAVAEQAKAQYADALAALSQARMNLDRTQVRSTVNGYVTNLTMRVGDFATAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCCHHCCC
SDIEVIDAESYWVDGYFEETRMRGIYPGALVRIDLMGYATPLWGHVESITRGISSANAQR
CCEEEEECCCEEECCCHHHHHHCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHCCCHH
STQGLPLVNPVYTWVRLAQRIPVRVHIDALPAGITLAAGMTASVSIVTPEGRQPRVTLRA
CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCHHHHHH
LVAQLRQSMHRVRPPNAVAASPATPVPSPTSLSNGVSEDGQDR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFERARHVIRIATTLAILAIATVVVLGLWDYYTAAPWTRNGQVRVQVANIAPRVSGQIVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEE
VRVTDNQYVHRGDVLYSIDPFDFRIAVASATARVNERQADLTLRLAQHQRRQQLSSASAS
EEECCCCEEECCCEEEEECCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
AEEKQQFEAVAEQAKAQYADALAALSQARMNLDRTQVRSTVNGYVTNLTMRVGDFATAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCCHHCCC
SDIEVIDAESYWVDGYFEETRMRGIYPGALVRIDLMGYATPLWGHVESITRGISSANAQR
CCEEEEECCCEEECCCHHHHHHCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHCCCHH
STQGLPLVNPVYTWVRLAQRIPVRVHIDALPAGITLAAGMTASVSIVTPEGRQPRVTLRA
CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCHHHHHH
LVAQLRQSMHRVRPPNAVAASPATPVPSPTSLSNGVSEDGQDR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]