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The map label for this gene is lutB [H]

Identifier: 162146565

GI number: 162146565

Start: 759274

End: 760707

Strand: Reverse

Name: lutB [H]

Synonym: GDI_0742

Alternate gene names: 162146565

Gene position: 760707-759274 (Counterclockwise)

Preceding gene: 162146566

Following gene: 162146564

Centisome position: 19.29

GC content: 66.81

Gene sequence:

>1434_bases
ATGAAAGGGACAGGGCGCATGAAGGAGAAGCGCGTCGACCATGCCGGGGCGGCCGCGTCCTTCCTGGCCGACGAGGCGCA
TCTGGCGTTTCATGACGCGCGGCTGTGGGACATGCGGCAGAAGCGCGACGCGCAGATGCACCTGCTGCCGGAATGGCAGG
AGCTGCGCACCCTGGCGTCGCAGATCAAGGAACACACGCTGGCGAACCTGGCGGAGTACCTGCAGCAGTTCGAGGATAAT
GCCACGCGCAACGGCATCCGCGTCCACTGGGCCGCCGACGGGGCCGAGCATAATCGCATCGTGGCCGAAATCCTGGAGGC
ACGCGGCGCGAAGACGCTGATCAAGAGCAAGTCGATGGTGACCGAGGAATGCGACCTGCGCCCGTACCTGGCGGCGCGGG
GCGTCACGGTCACCGAGACGGACCTGGGCGAACGGATCCAGCAGCTGGACGACCAGATGCCCAGCCACATCGTCGTGCCG
TCGGTGCACAAGCTGACGGGCGACGTGGCGCGGATTTTCGCCCGCCATTACGGCACCGACCCCGCCGCCGACGACCCCCA
CCAGTTGGCCGAGGCCCAGCGCATCGCGGCGCGCCCGGTCATCCTGCATGCCGACGCGGGCATGACCGGGGCCAATTTCG
TGGTGGCGGAAACCGGCAGTTTCGTCGTCTGCACCAACGAGGGCAATGCCGATTTGTGCGCCACCGTGCCGGGCGTGCAT
ATCGCCACCATCGGGATCGAGCGCCTGGTGCCCCGCATGGCCGACCTGGGCGTGTTCATCCGCCTGCTGTCGCGCAGCGC
CCTGGGTTCGCCCATCACGCAATACACCACCCATTTCCGCGGCCCGCAGGACGGGGGCGAGATGCACGTGATCCTGGTCG
ATAACGGCCGGTCGGCCCGGCTGGGCATGGCGGATTTCTGGACCTCGCTGAAATGCATCCGCTGCGGCGCGTGCATGAAC
ACCTGCCCGGTCTATCGCCGGTCGGGGGGGCTGTCCTATGGCGCGGTCTATTCCGGCCCCATCGGCGCCATCATCGATCC
GACCTTCAACGAGCGCAAATACAGCACCCTGCCCTTCGCCTCGACCATGAACGGCAGTTGCACCAACGTCTGTCCGGTCC
GGATCGACATTCACGACCAGTTATACAAATGGCGGCAGGTCCTGGTCGAACACCACCAGATGCCCTTCGTCAAACGCGAG
ATCATGCACATGGCCGGGCGCCTGATGGGCCAGCCGAAGCTCTACCGCGCCGCGATGGCGGGGGGCGGGGCCGCGCTGAA
CACGCTGCCCCGCGCGGCATTGTACAATTGGCTGAATCCCTGGGGCCGGCACCGCGAACTGCCGCATCCCGCCCCGCAGA
CATTCCATAGCTGGTATCGCCGGAACCGGCCCCGCAAGCCCGATGCGGGGACCGACGCGAAAGAGGCGACATGA

Upstream 100 bases:

>100_bases
CCGATTCATCCTGCATGATGCACCAGCAGGGATGCGCCGAGCGGGCCGGGGTGGACATGCGCTTCATTCACATTGCCGAA
ATCCTCAACGGAGCCCGGTC

Downstream 100 bases:

>100_bases
GCGCGCGCGACACCATCCTGGCGGCGCTGCGCCGCAACCGGCCCGACCCGGCGGCGCATCCCCTGCCCCCGCCCGCCCTG
CTGGGCGACGAGGATGCCGG

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKGTGRMKEKRVDHAGAAASFLADEAHLAFHDARLWDMRQKRDAQMHLLPEWQELRTLASQIKEHTLANLAEYLQQFEDN
ATRNGIRVHWAADGAEHNRIVAEILEARGAKTLIKSKSMVTEECDLRPYLAARGVTVTETDLGERIQQLDDQMPSHIVVP
SVHKLTGDVARIFARHYGTDPAADDPHQLAEAQRIAARPVILHADAGMTGANFVVAETGSFVVCTNEGNADLCATVPGVH
IATIGIERLVPRMADLGVFIRLLSRSALGSPITQYTTHFRGPQDGGEMHVILVDNGRSARLGMADFWTSLKCIRCGACMN
TCPVYRRSGGLSYGAVYSGPIGAIIDPTFNERKYSTLPFASTMNGSCTNVCPVRIDIHDQLYKWRQVLVEHHQMPFVKRE
IMHMAGRLMGQPKLYRAAMAGGGAALNTLPRAALYNWLNPWGRHRELPHPAPQTFHSWYRRNRPRKPDAGTDAKEAT

Sequences:

>Translated_477_residues
MKGTGRMKEKRVDHAGAAASFLADEAHLAFHDARLWDMRQKRDAQMHLLPEWQELRTLASQIKEHTLANLAEYLQQFEDN
ATRNGIRVHWAADGAEHNRIVAEILEARGAKTLIKSKSMVTEECDLRPYLAARGVTVTETDLGERIQQLDDQMPSHIVVP
SVHKLTGDVARIFARHYGTDPAADDPHQLAEAQRIAARPVILHADAGMTGANFVVAETGSFVVCTNEGNADLCATVPGVH
IATIGIERLVPRMADLGVFIRLLSRSALGSPITQYTTHFRGPQDGGEMHVILVDNGRSARLGMADFWTSLKCIRCGACMN
TCPVYRRSGGLSYGAVYSGPIGAIIDPTFNERKYSTLPFASTMNGSCTNVCPVRIDIHDQLYKWRQVLVEHHQMPFVKRE
IMHMAGRLMGQPKLYRAAMAGGGAALNTLPRAALYNWLNPWGRHRELPHPAPQTFHSWYRRNRPRKPDAGTDAKEAT
>Mature_477_residues
MKGTGRMKEKRVDHAGAAASFLADEAHLAFHDARLWDMRQKRDAQMHLLPEWQELRTLASQIKEHTLANLAEYLQQFEDN
ATRNGIRVHWAADGAEHNRIVAEILEARGAKTLIKSKSMVTEECDLRPYLAARGVTVTETDLGERIQQLDDQMPSHIVVP
SVHKLTGDVARIFARHYGTDPAADDPHQLAEAQRIAARPVILHADAGMTGANFVVAETGSFVVCTNEGNADLCATVPGVH
IATIGIERLVPRMADLGVFIRLLSRSALGSPITQYTTHFRGPQDGGEMHVILVDNGRSARLGMADFWTSLKCIRCGACMN
TCPVYRRSGGLSYGAVYSGPIGAIIDPTFNERKYSTLPFASTMNGSCTNVCPVRIDIHDQLYKWRQVLVEHHQMPFVKRE
IMHMAGRLMGQPKLYRAAMAGGGAALNTLPRAALYNWLNPWGRHRELPHPAPQTFHSWYRRNRPRKPDAGTDAKEAT

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=440, Percent_Identity=37.9545454545455, Blast_Score=319, Evalue=3e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52974; Mature: 52974

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTGRMKEKRVDHAGAAASFLADEAHLAFHDARLWDMRQKRDAQMHLLPEWQELRTLAS
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH
QIKEHTLANLAEYLQQFEDNATRNGIRVHWAADGAEHNRIVAEILEARGAKTLIKSKSMV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHH
TEECDLRPYLAARGVTVTETDLGERIQQLDDQMPSHIVVPSVHKLTGDVARIFARHYGTD
HHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC
PAADDPHQLAEAQRIAARPVILHADAGMTGANFVVAETGSFVVCTNEGNADLCATVPGVH
CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCCE
IATIGIERLVPRMADLGVFIRLLSRSALGSPITQYTTHFRGPQDGGEMHVILVDNGRSAR
EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCC
LGMADFWTSLKCIRCGACMNTCPVYRRSGGLSYGAVYSGPIGAIIDPTFNERKYSTLPFA
CCHHHHHHHHHHHHHCCHHHCCCHHHCCCCCEECCEECCCCCCEECCCCCCCCCCCCCCC
STMNGSCTNVCPVRIDIHDQLYKWRQVLVEHHQMPFVKREIMHMAGRLMGQPKLYRAAMA
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHC
GGGAALNTLPRAALYNWLNPWGRHRELPHPAPQTFHSWYRRNRPRKPDAGTDAKEAT
CCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKGTGRMKEKRVDHAGAAASFLADEAHLAFHDARLWDMRQKRDAQMHLLPEWQELRTLAS
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH
QIKEHTLANLAEYLQQFEDNATRNGIRVHWAADGAEHNRIVAEILEARGAKTLIKSKSMV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHH
TEECDLRPYLAARGVTVTETDLGERIQQLDDQMPSHIVVPSVHKLTGDVARIFARHYGTD
HHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC
PAADDPHQLAEAQRIAARPVILHADAGMTGANFVVAETGSFVVCTNEGNADLCATVPGVH
CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCCE
IATIGIERLVPRMADLGVFIRLLSRSALGSPITQYTTHFRGPQDGGEMHVILVDNGRSAR
EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCC
LGMADFWTSLKCIRCGACMNTCPVYRRSGGLSYGAVYSGPIGAIIDPTFNERKYSTLPFA
CCHHHHHHHHHHHHHCCHHHCCCHHHCCCCCEECCEECCCCCCEECCCCCCCCCCCCCCC
STMNGSCTNVCPVRIDIHDQLYKWRQVLVEHHQMPFVKREIMHMAGRLMGQPKLYRAAMA
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHC
GGGAALNTLPRAALYNWLNPWGRHRELPHPAPQTFHSWYRRNRPRKPDAGTDAKEAT
CCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA