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The map label for this gene is yxnA [H]

Identifier: 162146553

GI number: 162146553

Start: 748398

End: 749384

Strand: Reverse

Name: yxnA [H]

Synonym: GDI_0730

Alternate gene names: 162146553

Gene position: 749384-748398 (Counterclockwise)

Preceding gene: 162146554

Following gene: 162146549

Centisome position: 19.0

GC content: 73.15

Gene sequence:

>987_bases
ATGCCACACCAGGTTGCCGTCATCACCGGAGCAGGGGCCGGTATCGGCCGCGCCACCGCGCGGACCCTTGCCCGCGCGGG
ATGCGACGTCGCCCTGATCGGCCGGGACCGGGCGCGGCTGGAGGATGCGGCGGCCGAACTGGCCGGGCTGCATGTCCGCA
CCGCCGTCCTGGTGGCCGACGTGGCCGAGGCCGATGCGCTGGAACAGGCCGCCGACGCGATCGAGGACCAGTTGGGCCCC
ATCACCCTGTGGGTCAATTGCGCCGGCGCCGGGGTCAGCGGCCAGTTCGTCGCCCTGTCGCCCGACGAAATCCGCCGTGC
GACGGAAGTGACCTACCTGGGCACCGTCTTCGGCACGCGTGCGGCGCTGGCGCGGATGCGGCGGCGCGGATACGGCACGA
TCGTCAACCTGGACGCGCTGGGCCTGCCGCGCCCGCTGCGGGCCGTCGAAAGCGGCGCGCGGGCGGCGATCCGCGCCTTT
ACCGAAAGCCTGCGGCCGGAAATCCTGCATGACGGGGACCGGATCCACCTGTCCCTGGTCCATCTGCCGGCCATCAATAC
CCCGCGCTTTGCCTGGACGCGCAACCGTACCGGCAAGCGGCTGCGGCCGGCCGGCCCGGTCTACGAACCCGAAATCGCCG
CCGAGGCGATCAGCCATGCCGCCTTCGGCCGCCATCGTGACGTGTGGGTCGGCCTGTCGGGCCTGGGACGGCGCCTGGCC
GGGCTGCTGGCCCCGACGCTGGTGGACCGCCGGCAGTCGGTCCGGTCCTATGCCGCGCAACTGGAAAAGAACCCGGCCGA
AAGCGACGCGCCGGACAGCCTGTTCGCCCCGGTGGCCGGGGCCTACGCCGCGCACGGCCGTTTCGACCTGATCGCGCGCA
AGACCATGCCGCCGCTGATCACGACCACGATCCGCACCGCCGCCATCGGCGTGGCCCTGGTTGCGGGGGCCGGGGCCGCC
CTGTCCCTGCTGCGCCGCAGGGACTGA

Upstream 100 bases:

>100_bases
GCGCTGAAATACCTCTGATCCGACACGGCGACTTGCGGCGCGGTGCGTCGCGGAGCAAACACGGCATCGGAAAGTACGTA
TCAGGTCCGGAGCCTTCGCC

Downstream 100 bases:

>100_bases
TCCGGCTTAGCTGGGCCGGGTCCGTCCGCTGGGGTGGATCATGGCCTGGTGCCGTGTCAGCGCCTGGACGACGCGCCGCG
CATCGTCCGGGGCCAGGGCC

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPHQVAVITGAGAGIGRATARTLARAGCDVALIGRDRARLEDAAAELAGLHVRTAVLVADVAEADALEQAADAIEDQLGP
ITLWVNCAGAGVSGQFVALSPDEIRRATEVTYLGTVFGTRAALARMRRRGYGTIVNLDALGLPRPLRAVESGARAAIRAF
TESLRPEILHDGDRIHLSLVHLPAINTPRFAWTRNRTGKRLRPAGPVYEPEIAAEAISHAAFGRHRDVWVGLSGLGRRLA
GLLAPTLVDRRQSVRSYAAQLEKNPAESDAPDSLFAPVAGAYAAHGRFDLIARKTMPPLITTTIRTAAIGVALVAGAGAA
LSLLRRRD

Sequences:

>Translated_328_residues
MPHQVAVITGAGAGIGRATARTLARAGCDVALIGRDRARLEDAAAELAGLHVRTAVLVADVAEADALEQAADAIEDQLGP
ITLWVNCAGAGVSGQFVALSPDEIRRATEVTYLGTVFGTRAALARMRRRGYGTIVNLDALGLPRPLRAVESGARAAIRAF
TESLRPEILHDGDRIHLSLVHLPAINTPRFAWTRNRTGKRLRPAGPVYEPEIAAEAISHAAFGRHRDVWVGLSGLGRRLA
GLLAPTLVDRRQSVRSYAAQLEKNPAESDAPDSLFAPVAGAYAAHGRFDLIARKTMPPLITTTIRTAAIGVALVAGAGAA
LSLLRRRD
>Mature_327_residues
PHQVAVITGAGAGIGRATARTLARAGCDVALIGRDRARLEDAAAELAGLHVRTAVLVADVAEADALEQAADAIEDQLGPI
TLWVNCAGAGVSGQFVALSPDEIRRATEVTYLGTVFGTRAALARMRRRGYGTIVNLDALGLPRPLRAVESGARAAIRAFT
ESLRPEILHDGDRIHLSLVHLPAINTPRFAWTRNRTGKRLRPAGPVYEPEIAAEAISHAAFGRHRDVWVGLSGLGRRLAG
LLAPTLVDRRQSVRSYAAQLEKNPAESDAPDSLFAPVAGAYAAHGRFDLIARKTMPPLITTTIRTAAIGVALVAGAGAAL
SLLRRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4503817, Length=247, Percent_Identity=28.3400809716599, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI142976729, Length=232, Percent_Identity=24.5689655172414, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI20149619, Length=172, Percent_Identity=31.3953488372093, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI210032110, Length=144, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI40254992, Length=167, Percent_Identity=28.1437125748503, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87082100, Length=176, Percent_Identity=31.25, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=189, Percent_Identity=31.2169312169312, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21356301, Length=251, Percent_Identity=29.0836653386454, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24649181, Length=186, Percent_Identity=27.9569892473118, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21358495, Length=186, Percent_Identity=30.6451612903226, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI116007238, Length=208, Percent_Identity=28.3653846153846, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI116007236, Length=175, Percent_Identity=30.2857142857143, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571387, Length=189, Percent_Identity=31.2169312169312, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI23397609, Length=179, Percent_Identity=32.4022346368715, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21355631, Length=176, Percent_Identity=28.4090909090909, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24641232, Length=196, Percent_Identity=29.5918367346939, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24639444, Length=227, Percent_Identity=30.3964757709251, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584752, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281364494, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34715; Mature: 34584

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHQVAVITGAGAGIGRATARTLARAGCDVALIGRDRARLEDAAAELAGLHVRTAVLVAD
CCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VAEADALEQAADAIEDQLGPITLWVNCAGAGVSGQFVALSPDEIRRATEVTYLGTVFGTR
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
AALARMRRRGYGTIVNLDALGLPRPLRAVESGARAAIRAFTESLRPEILHDGDRIHLSLV
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEE
HLPAINTPRFAWTRNRTGKRLRPAGPVYEPEIAAEAISHAAFGRHRDVWVGLSGLGRRLA
EECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH
GLLAPTLVDRRQSVRSYAAQLEKNPAESDAPDSLFAPVAGAYAAHGRFDLIARKTMPPLI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCHH
TTTIRTAAIGVALVAGAGAALSLLRRRD
HHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
PHQVAVITGAGAGIGRATARTLARAGCDVALIGRDRARLEDAAAELAGLHVRTAVLVAD
CCEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VAEADALEQAADAIEDQLGPITLWVNCAGAGVSGQFVALSPDEIRRATEVTYLGTVFGTR
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
AALARMRRRGYGTIVNLDALGLPRPLRAVESGARAAIRAFTESLRPEILHDGDRIHLSLV
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEE
HLPAINTPRFAWTRNRTGKRLRPAGPVYEPEIAAEAISHAAFGRHRDVWVGLSGLGRRLA
EECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH
GLLAPTLVDRRQSVRSYAAQLEKNPAESDAPDSLFAPVAGAYAAHGRFDLIARKTMPPLI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCHH
TTTIRTAAIGVALVAGAGAALSLLRRRD
HHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]