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The map label for this gene is yfdZ [C]

Identifier: 162146432

GI number: 162146432

Start: 615333

End: 616478

Strand: Reverse

Name: yfdZ [C]

Synonym: GDI_0607

Alternate gene names: 162146432

Gene position: 616478-615333 (Counterclockwise)

Preceding gene: 162146433

Following gene: 162146428

Centisome position: 15.63

GC content: 69.2

Gene sequence:

>1146_bases
ATGACCGTACCCCGGATCGACCCGTTCCATGCCGTCGGCCTGAGCACGCTTGCGCATCGCATGGCGGCCGAGGGGCGCAG
CATCGTGCACATGGAATTCGGCCAGCCCTCGACCGGCGCGCCGAAGGCCGCGATCGCCGAGGCCCATCGCATCCTGGACA
GCGACGGCATGGGATATTGGGAGAGCACGCCGCTGAAGGCGCGCATCGCCCGGCATTATCGGGACAGCTACGACGTCAGC
GTCGAGCCGGAACAGATCTGGCTGACCTGCGGGGCGTCGCCGGCCTTCGTCCTGGCACTGAATTGCTGCTTCGCGCCCGG
CGCGCGGATCGCGCTGGCCCGCCCGGGCTATGTCGCCTATCGCAACACGCTGCGCGCGCTGTATCTGGAACCGGTGGAAA
TCGCCTGCGGCCCGGCCGAACGGTTCCAGCTCTCGGCCGCCGCCATCGCGGCGCTGGACCCGCCGCCCGACGGCGTGATC
CTGGCCAGCCCCGCCAACCCGACCGGCACGATCCTTTCCACCGAGGAAATGCAGGCCATCGTCGCGCTGTGCCGCGCGCG
CGGCATCCGGATCATCTCGGACGAGATCTATCACGGGCTGAGCTATATCGGACCGGTGCGCTCGGTCCTGCAGGACGACC
CCGACGCGCTGGTGGTCAACAGCTTCTCGAAATATTTCAGCATGGCGGGCTGGCGGCTGGGCTGGCTGGTGGTGCCCCCC
GCGCTGGTCGAGGCTGCGCAGACGCGGGTGGGCAACATGTTCCTGACCCCGCCCTCGCTCAGCCAGCATGCCGGGCTGGT
CGCCTTCGACTGCCGCGAGGAGCTGGAGGGCCATGTCCGCATGTACCGCCACAATCGCGACCTGATGCTGGAGCATCTGC
CCGCGCTGGGGCTGTCGCGGATCGCGCCGCCGGACGGGGCGTTCTATATCTACGCCGATATCGGGCACCTGACCGACGAC
AGCCTGGCCTTCTGCGCCCGGCTGCTGGCCGAAACCGGGGTGGCGACCGCACCGGGGCTGGATTTCGACCCGATGGAGGG
CCACCGTTTCATGCGCTTCAGCTTCGCGGTCTCGACCGACCGGCTGGAGGAGGCATTGCGACGCATGACGCCCTGGTTCG
CCCGCGCGCGCGACGCCGCGCGATAG

Upstream 100 bases:

>100_bases
ACGTTCGTCCGATAGGGTTCCGGGGGCAAACCTTGTCGGCGGGGCCGGCCGCGATTATCCCGGATGCACGCCCCTTCGCC
ATCATCTGGACTGTCCCGAC

Downstream 100 bases:

>100_bases
GGCAGACCAGGGGCCGCTGCTACCCCATCAGGGACCTGATCCCGGGCAGGATCGCCACCAGCAGCCCGGCGGGCGGCGGT
TTCACGCCGTGGGTCCGCAC

Product: aspartate aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTVPRIDPFHAVGLSTLAHRMAAEGRSIVHMEFGQPSTGAPKAAIAEAHRILDSDGMGYWESTPLKARIARHYRDSYDVS
VEPEQIWLTCGASPAFVLALNCCFAPGARIALARPGYVAYRNTLRALYLEPVEIACGPAERFQLSAAAIAALDPPPDGVI
LASPANPTGTILSTEEMQAIVALCRARGIRIISDEIYHGLSYIGPVRSVLQDDPDALVVNSFSKYFSMAGWRLGWLVVPP
ALVEAAQTRVGNMFLTPPSLSQHAGLVAFDCREELEGHVRMYRHNRDLMLEHLPALGLSRIAPPDGAFYIYADIGHLTDD
SLAFCARLLAETGVATAPGLDFDPMEGHRFMRFSFAVSTDRLEEALRRMTPWFARARDAAR

Sequences:

>Translated_381_residues
MTVPRIDPFHAVGLSTLAHRMAAEGRSIVHMEFGQPSTGAPKAAIAEAHRILDSDGMGYWESTPLKARIARHYRDSYDVS
VEPEQIWLTCGASPAFVLALNCCFAPGARIALARPGYVAYRNTLRALYLEPVEIACGPAERFQLSAAAIAALDPPPDGVI
LASPANPTGTILSTEEMQAIVALCRARGIRIISDEIYHGLSYIGPVRSVLQDDPDALVVNSFSKYFSMAGWRLGWLVVPP
ALVEAAQTRVGNMFLTPPSLSQHAGLVAFDCREELEGHVRMYRHNRDLMLEHLPALGLSRIAPPDGAFYIYADIGHLTDD
SLAFCARLLAETGVATAPGLDFDPMEGHRFMRFSFAVSTDRLEEALRRMTPWFARARDAAR
>Mature_380_residues
TVPRIDPFHAVGLSTLAHRMAAEGRSIVHMEFGQPSTGAPKAAIAEAHRILDSDGMGYWESTPLKARIARHYRDSYDVSV
EPEQIWLTCGASPAFVLALNCCFAPGARIALARPGYVAYRNTLRALYLEPVEIACGPAERFQLSAAAIAALDPPPDGVIL
ASPANPTGTILSTEEMQAIVALCRARGIRIISDEIYHGLSYIGPVRSVLQDDPDALVVNSFSKYFSMAGWRLGWLVVPPA
LVEAAQTRVGNMFLTPPSLSQHAGLVAFDCREELEGHVRMYRHNRDLMLEHLPALGLSRIAPPDGAFYIYADIGHLTDDS
LAFCARLLAETGVATAPGLDFDPMEGHRFMRFSFAVSTDRLEEALRRMTPWFARARDAAR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=388, Percent_Identity=24.7422680412371, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI56713256, Length=388, Percent_Identity=24.7422680412371, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI95147551, Length=401, Percent_Identity=21.9451371571072, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI169881279, Length=401, Percent_Identity=21.9451371571072, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI4507369, Length=322, Percent_Identity=25.4658385093168, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI169881281, Length=307, Percent_Identity=23.4527687296417, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788722, Length=371, Percent_Identity=25.8760107816712, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786816, Length=298, Percent_Identity=28.8590604026846, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788627, Length=343, Percent_Identity=25.3644314868805, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787710, Length=320, Percent_Identity=24.375, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790797, Length=329, Percent_Identity=25.8358662613982, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17567663, Length=380, Percent_Identity=26.8421052631579, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71994476, Length=345, Percent_Identity=23.4782608695652, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71994472, Length=345, Percent_Identity=23.4782608695652, Blast_Score=78, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322401, Length=387, Percent_Identity=21.7054263565891, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI28573069, Length=297, Percent_Identity=23.2323232323232, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24646114, Length=297, Percent_Identity=23.2323232323232, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573067, Length=297, Percent_Identity=23.2323232323232, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573065, Length=297, Percent_Identity=23.2323232323232, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859735, Length=376, Percent_Identity=22.8723404255319, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41702; Mature: 41571

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPRIDPFHAVGLSTLAHRMAAEGRSIVHMEFGQPSTGAPKAAIAEAHRILDSDGMGYW
CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
ESTPLKARIARHYRDSYDVSVEPEQIWLTCGASPAFVLALNCCFAPGARIALARPGYVAY
CCCCHHHHHHHHHCCCCCCEECCCEEEEEECCCCCEEHEEHHHCCCCCEEEEECCCHHHH
RNTLRALYLEPVEIACGPAERFQLSAAAIAALDPPPDGVILASPANPTGTILSTEEMQAI
HHHHHHHEECCHHEECCCHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCEEEHHHHHHH
VALCRARGIRIISDEIYHGLSYIGPVRSVLQDDPDALVVNSFSKYFSMAGWRLGWLVVPP
HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEEEECCH
ALVEAAQTRVGNMFLTPPSLSQHAGLVAFDCREELEGHVRMYRHNRDLMLEHLPALGLSR
HHHHHHHHHHCCEEECCCCCHHHCCEEEECCHHHHHHHHHHHHCCCHHHHHHCCCCCHHH
IAPPDGAFYIYADIGHLTDDSLAFCARLLAETGVATAPGLDFDPMEGHRFMRFSFAVSTD
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECHH
RLEEALRRMTPWFARARDAAR
HHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure 
TVPRIDPFHAVGLSTLAHRMAAEGRSIVHMEFGQPSTGAPKAAIAEAHRILDSDGMGYW
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
ESTPLKARIARHYRDSYDVSVEPEQIWLTCGASPAFVLALNCCFAPGARIALARPGYVAY
CCCCHHHHHHHHHCCCCCCEECCCEEEEEECCCCCEEHEEHHHCCCCCEEEEECCCHHHH
RNTLRALYLEPVEIACGPAERFQLSAAAIAALDPPPDGVILASPANPTGTILSTEEMQAI
HHHHHHHEECCHHEECCCHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCEEEHHHHHHH
VALCRARGIRIISDEIYHGLSYIGPVRSVLQDDPDALVVNSFSKYFSMAGWRLGWLVVPP
HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEEEECCH
ALVEAAQTRVGNMFLTPPSLSQHAGLVAFDCREELEGHVRMYRHNRDLMLEHLPALGLSR
HHHHHHHHHHCCEEECCCCCHHHCCEEEECCHHHHHHHHHHHHCCCHHHHHHCCCCCHHH
IAPPDGAFYIYADIGHLTDDSLAFCARLLAETGVATAPGLDFDPMEGHRFMRFSFAVSTD
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECHH
RLEEALRRMTPWFARARDAAR
HHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]