| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is gluP [H]
Identifier: 162146430
GI number: 162146430
Start: 611910
End: 613283
Strand: Direct
Name: gluP [H]
Synonym: GDI_0605
Alternate gene names: 162146430
Gene position: 611910-613283 (Clockwise)
Preceding gene: 162146429
Following gene: 162146431
Centisome position: 15.51
GC content: 71.25
Gene sequence:
>1374_bases GTGACCAGTCCGGCCGGCGCCCATGGCTGGCGCCCGATCGTCATCATGGCGATCCTGTTCTTCAGCATCGGCTTCGTCAC CTGGCTCAATGGGCCGCTGATCACCTTCGTGCAGCTTGCCTTCAACCTCAGCGATGTCGCGGCGTTCCTGGTTCCGGCCT GTTTCTACCTGGCCTATTTCGTGTTTCCCATTCCCGCCACCCTGCTGGCGCGCCGCACCGGGCTGAAAGCCGGCATGGCG GTCTCGCTGATGGTGATGGCGGGCGGGACGGCGCTGTTCGGCGAATGCGTGACCGCGCGCTGGTATCCCGGCGCGCTGGC CGGGCTGGGGGTCATCGGCGCCGGCCTGTCGCTGCTGCAGGTGACGATCAACCCCTATGTCAGCCTGCTGGGCCCGCATG CCCGCGCGGCGCAGCGCATCGCCATCATGGGCACGGCGAACAAGTGCGCGGGCATTGTCGCCCCGCTGGTGTTCGCCGGG CTGGTCATGCGCGATATCGGCGGCATCGCGGCGCAGGTCCGCGCCGCGCCGTCGGCGGCGGCGCGTGACGCCGTCCTCGC CCGTTTCACCCATGCGGTGCATGCGCCCTATCTGGCCATGGCGGTGCTGCTGCTGGGGTTGGCGGTATGGATCCTGCGCG CGCGCCTGCCATCCATCGCCATCGGCCGGGAGGACACGGCCGACGCGGCCGGCCATGCGGAGGGGCCGGCGCGGGGCGGC GTTCCCCTGCTGTGCCTGGGCGTGTTCAGCACGTTCCTCTATGTCGGGGTAGAGGTCATGGCCGGCGACGCGATCGGGAT GTACGGGCGCGGATTCGGCCTGTCGCTGGACGTCACCAAATATTTCACCGCCCTGACCCTGGCGGCGATGATGGCGGGCT ACCTGGCGGGCATGGCCGTGGTGCCGCGCCTGGTCTCGCAACTGCAGTACATGGGTCTGTCCTGCGGGCTGGGGCTGGTG CTGTGCGGGGCGGCGTGGGTCAGCAGCGGGCTGGTCTCGGTCCTGTGCGTGGCGCTGCTCGGCTTTGCCAACGCCATGAT CATGCCGGCGCTGTTTCCGGTGGTCATGCGCATGATGGACCGGCATGCCGACCGCGCGGCGGCGCTTCTGGTGATGGCGT TCTCGGGCGGGGCGGTGCTGCCGCAGGTCTTCGTGCATCTGGCGCAGACCCGCGGGGCGCACGCCGCCTTCGTGCTGGTC GCGGCCCCGTCCTATCTGGTGATCCTGGCCTATGTCGGCCTGATGCGGCGGCGGACGGCGATTGCCGGTCCGGGGGCCGG TGGCGGCATGGCGGGCGGCGTGGCGGCCGCGGCGCTGGGCGCGGTGCTGGCCGTGGCGCTGCCGGCGGGGCACGCGCGGG CGGCACCGGCGTGA
Upstream 100 bases:
>100_bases ATGGCGGAAGGCATCTGGGCCATTCGGCGGGGCGTGCTATCGTCATCGTGACGTCCCATCTTTCGCCGCCGGAAGGAACA GCCTCTTGACGACCCCGTCC
Downstream 100 bases:
>100_bases TGCCGCTGCCCGCCTCGGCGCATTATTCCGGCCAGACCCTGTCCCTGGCCAACGGCCTGGCCGTGCAGTGGGACCACGCG CCGACACCCCTGCTGCGCCG
Product: sugar transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTSPAGAHGWRPIVIMAILFFSIGFVTWLNGPLITFVQLAFNLSDVAAFLVPACFYLAYFVFPIPATLLARRTGLKAGMA VSLMVMAGGTALFGECVTARWYPGALAGLGVIGAGLSLLQVTINPYVSLLGPHARAAQRIAIMGTANKCAGIVAPLVFAG LVMRDIGGIAAQVRAAPSAAARDAVLARFTHAVHAPYLAMAVLLLGLAVWILRARLPSIAIGREDTADAAGHAEGPARGG VPLLCLGVFSTFLYVGVEVMAGDAIGMYGRGFGLSLDVTKYFTALTLAAMMAGYLAGMAVVPRLVSQLQYMGLSCGLGLV LCGAAWVSSGLVSVLCVALLGFANAMIMPALFPVVMRMMDRHADRAAALLVMAFSGGAVLPQVFVHLAQTRGAHAAFVLV AAPSYLVILAYVGLMRRRTAIAGPGAGGGMAGGVAAAALGAVLAVALPAGHARAAPA
Sequences:
>Translated_457_residues MTSPAGAHGWRPIVIMAILFFSIGFVTWLNGPLITFVQLAFNLSDVAAFLVPACFYLAYFVFPIPATLLARRTGLKAGMA VSLMVMAGGTALFGECVTARWYPGALAGLGVIGAGLSLLQVTINPYVSLLGPHARAAQRIAIMGTANKCAGIVAPLVFAG LVMRDIGGIAAQVRAAPSAAARDAVLARFTHAVHAPYLAMAVLLLGLAVWILRARLPSIAIGREDTADAAGHAEGPARGG VPLLCLGVFSTFLYVGVEVMAGDAIGMYGRGFGLSLDVTKYFTALTLAAMMAGYLAGMAVVPRLVSQLQYMGLSCGLGLV LCGAAWVSSGLVSVLCVALLGFANAMIMPALFPVVMRMMDRHADRAAALLVMAFSGGAVLPQVFVHLAQTRGAHAAFVLV AAPSYLVILAYVGLMRRRTAIAGPGAGGGMAGGVAAAALGAVLAVALPAGHARAAPA >Mature_456_residues TSPAGAHGWRPIVIMAILFFSIGFVTWLNGPLITFVQLAFNLSDVAAFLVPACFYLAYFVFPIPATLLARRTGLKAGMAV SLMVMAGGTALFGECVTARWYPGALAGLGVIGAGLSLLQVTINPYVSLLGPHARAAQRIAIMGTANKCAGIVAPLVFAGL VMRDIGGIAAQVRAAPSAAARDAVLARFTHAVHAPYLAMAVLLLGLAVWILRARLPSIAIGREDTADAAGHAEGPARGGV PLLCLGVFSTFLYVGVEVMAGDAIGMYGRGFGLSLDVTKYFTALTLAAMMAGYLAGMAVVPRLVSQLQYMGLSCGLGLVL CGAAWVSSGLVSVLCVALLGFANAMIMPALFPVVMRMMDRHADRAAALLVMAFSGGAVLPQVFVHLAQTRGAHAAFVLVA APSYLVILAYVGLMRRRTAIAGPGAGGGMAGGVAAAALGAVLAVALPAGHARAAPA
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=412, Percent_Identity=23.0582524271845, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46745; Mature: 46613
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPAGAHGWRPIVIMAILFFSIGFVTWLNGPLITFVQLAFNLSDVAAFLVPACFYLAYF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFPIPATLLARRTGLKAGMAVSLMVMAGGTALFGECVTARWYPGALAGLGVIGAGLSLLQ HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH VTINPYVSLLGPHARAAQRIAIMGTANKCAGIVAPLVFAGLVMRDIGGIAAQVRAAPSAA HHHHHHHHHHCCHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ARDAVLARFTHAVHAPYLAMAVLLLGLAVWILRARLPSIAIGREDTADAAGHAEGPARGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC VPLLCLGVFSTFLYVGVEVMAGDAIGMYGRGFGLSLDVTKYFTALTLAAMMAGYLAGMAV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH VPRLVSQLQYMGLSCGLGLVLCGAAWVSSGLVSVLCVALLGFANAMIMPALFPVVMRMMD HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHADRAAALLVMAFSGGAVLPQVFVHLAQTRGAHAAFVLVAAPSYLVILAYVGLMRRRTA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHH IAGPGAGGGMAGGVAAAALGAVLAVALPAGHARAAPA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TSPAGAHGWRPIVIMAILFFSIGFVTWLNGPLITFVQLAFNLSDVAAFLVPACFYLAYF CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFPIPATLLARRTGLKAGMAVSLMVMAGGTALFGECVTARWYPGALAGLGVIGAGLSLLQ HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH VTINPYVSLLGPHARAAQRIAIMGTANKCAGIVAPLVFAGLVMRDIGGIAAQVRAAPSAA HHHHHHHHHHCCHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ARDAVLARFTHAVHAPYLAMAVLLLGLAVWILRARLPSIAIGREDTADAAGHAEGPARGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC VPLLCLGVFSTFLYVGVEVMAGDAIGMYGRGFGLSLDVTKYFTALTLAAMMAGYLAGMAV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH VPRLVSQLQYMGLSCGLGLVLCGAAWVSSGLVSVLCVALLGFANAMIMPALFPVVMRMMD HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHADRAAALLVMAFSGGAVLPQVFVHLAQTRGAHAAFVLVAAPSYLVILAYVGLMRRRTA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHH IAGPGAGGGMAGGVAAAALGAVLAVALPAGHARAAPA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]