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The map label for this gene is mtnB [H]

Identifier: 162146410

GI number: 162146410

Start: 589790

End: 590467

Strand: Direct

Name: mtnB [H]

Synonym: GDI_0585

Alternate gene names: 162146410

Gene position: 589790-590467 (Clockwise)

Preceding gene: 162146409

Following gene: 162146411

Centisome position: 14.95

GC content: 69.47

Gene sequence:

>678_bases
GTGAGGGCGGGCCCTGACGGGCCAGCGACCCCGGATCGACCCAGGATCGACATGGACACGATGATTTCGACCGACCCGTG
GGCCGGCGCGGTGCAGGATATTATCGCGGCCGGCCGGCGGATGGACCGGTTCGGCTGGGTGCCGGCCACGGCCGGCAATA
TCAGCCGCCGCCTGCCGGACGGGCGGATCGCCATCACCCGATCGGGCGGCCACAAGGGCCACCTGACCGCGGACGGGGTG
ATCGAGGTCACGGCGGACGGGCGCGCGGTGCGCGCCGGCGACCGGCCCAGCGCCGAAACCCTGCTGCATTGCCATGTCTA
TGAGGCGTCACCCGATGTGGGGGCCGTGCTGCACGGCCATTCCGTCGCCTCGACCGTGCTGTCGATGATGGAACAGGGCG
ATGCCATCCTGCTGTCGGGCTACGAGGTGCTGAAGGTGTTCGAGGGCCAGCAGACCCACGACACGACCGTGCGCCTGCCC
GTCTTCGACAACGACCAGGACATCGCCCGCCTGTCCGGCGTCGTGGCGCCGTATCTGGGCCGGATGCCGGCGGGCTACGT
CATTCGCGGCCACGGCGTGTATGTCTGGGGCGGGACGATGGACGTTGCCCTCGCCCGGCTCGAGGGCCTGGAATTCCTGC
TGGCCTGCGAACTGGAAAGAAGGAAGGTCGCACGATGA

Upstream 100 bases:

>100_bases
GCTCCGGCGGCCACATCGCCCCGCCCGGCCCCGCCGCCGGCACCGTGCAGCGTGATGCCAGCTTCTCGGGCACGGGGCGC
CCGTCCGGCTCCTCCACGCC

Downstream 100 bases:

>100_bases
GCCACCTGACCGTCTATCGCGACGACGACCCGGACGACATCGTCCTGCGGACCGACGACGCGGCCGTCATCGCCGACGCG
TTGCGCGGCATCGGTGCGCG

Product: methylthioribulose-1-phosphate dehydratase

Products: NA

Alternate protein names: MTRu-1-P dehydratase [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRAGPDGPATPDRPRIDMDTMISTDPWAGAVQDIIAAGRRMDRFGWVPATAGNISRRLPDGRIAITRSGGHKGHLTADGV
IEVTADGRAVRAGDRPSAETLLHCHVYEASPDVGAVLHGHSVASTVLSMMEQGDAILLSGYEVLKVFEGQQTHDTTVRLP
VFDNDQDIARLSGVVAPYLGRMPAGYVIRGHGVYVWGGTMDVALARLEGLEFLLACELERRKVAR

Sequences:

>Translated_225_residues
MRAGPDGPATPDRPRIDMDTMISTDPWAGAVQDIIAAGRRMDRFGWVPATAGNISRRLPDGRIAITRSGGHKGHLTADGV
IEVTADGRAVRAGDRPSAETLLHCHVYEASPDVGAVLHGHSVASTVLSMMEQGDAILLSGYEVLKVFEGQQTHDTTVRLP
VFDNDQDIARLSGVVAPYLGRMPAGYVIRGHGVYVWGGTMDVALARLEGLEFLLACELERRKVAR
>Mature_225_residues
MRAGPDGPATPDRPRIDMDTMISTDPWAGAVQDIIAAGRRMDRFGWVPATAGNISRRLPDGRIAITRSGGHKGHLTADGV
IEVTADGRAVRAGDRPSAETLLHCHVYEASPDVGAVLHGHSVASTVLSMMEQGDAILLSGYEVLKVFEGQQTHDTTVRLP
VFDNDQDIARLSGVVAPYLGRMPAGYVIRGHGVYVWGGTMDVALARLEGLEFLLACELERRKVAR

Specific function: Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) [H]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. MtnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=91, Percent_Identity=39.5604395604396, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR017714 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: =4.2.1.109 [H]

Molecular weight: Translated: 24205; Mature: 24205

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGPDGPATPDRPRIDMDTMISTDPWAGAVQDIIAAGRRMDRFGWVPATAGNISRRLPD
CCCCCCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCCC
GRIAITRSGGHKGHLTADGVIEVTADGRAVRAGDRPSAETLLHCHVYEASPDVGAVLHGH
CEEEEEECCCCCCCEEECCEEEEECCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEECH
SVASTVLSMMEQGDAILLSGYEVLKVFEGQQTHDTTVRLPVFDNDQDIARLSGVVAPYLG
HHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC
RMPAGYVIRGHGVYVWGGTMDVALARLEGLEFLLACELERRKVAR
CCCCCEEEECCEEEEECCHHHHHHHHHHCCEEEEEEEHHHHHCCC
>Mature Secondary Structure
MRAGPDGPATPDRPRIDMDTMISTDPWAGAVQDIIAAGRRMDRFGWVPATAGNISRRLPD
CCCCCCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCCC
GRIAITRSGGHKGHLTADGVIEVTADGRAVRAGDRPSAETLLHCHVYEASPDVGAVLHGH
CEEEEEECCCCCCCEEECCEEEEECCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEECH
SVASTVLSMMEQGDAILLSGYEVLKVFEGQQTHDTTVRLPVFDNDQDIARLSGVVAPYLG
HHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC
RMPAGYVIRGHGVYVWGGTMDVALARLEGLEFLLACELERRKVAR
CCCCCEEEECCEEEEECCHHHHHHHHHHCCEEEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA