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The map label for this gene is lsdJ

Identifier: 162146310

GI number: 162146310

Start: 482711

End: 483319

Strand: Direct

Name: lsdJ

Synonym: GDI_0485

Alternate gene names: NA

Gene position: 482711-483319 (Clockwise)

Preceding gene: 162146309

Following gene: 162146311

Centisome position: 12.24

GC content: 70.77

Gene sequence:

>609_bases
ATGAGCGCCGGACGGTCCTCCGGGCAGCAGGGCTTCACGCTGGTCGAGATCCTGGTCGCCCTGGTCGTCTTTTCCCTGGT
GCTTCTGGCGCTGGAACGCGGGTTCCAGGCGGCCACGCTGGTGTTCGAGCGCCAGCGCGGCCTGCTGGCGGCGCAGGCGG
AACTGGGGGCGGTCGACCGGTTCCTGCGCGCGCTGGTGCAGTATGCGGATGCCGGCGGCGCACGGACCGGGCCGGTCTTC
GTCGGGCGTGCCCACGGGTTCGTGCTGCGCGGCCCGTTGCCCCAGGCGCTCGGCGTTCCCGGGGGCACCGAGCACCTGGG
GCAACGGGCCGATTTCCGCCTGTCGGTGGATGGCGGCCACCGGCTGGTCCTGGCCTGGGTACCCTATCGCCACGTGACCG
AAACAACGCCTCCGCCCCGGCAGGAGGTCCTTCTGACCGGTGTTCAGGACATCGGCTGTGATTATTATTCCGCCGGGCAC
TGGGACAGTGGCTGGTACGGGAACGGCCTGCCGGTACTGGTGCGGATTCGTATCGTCTTTCCCGCTGGCGACCGCCGCCG
CTGGCCCGATATCGTCGCCGCCCCGGTGACGGAACCCGCGCCCGGGTGA

Upstream 100 bases:

>100_bases
TGTACCGGGTGGAGGTCAGCGAATCCTGGCCCGATATCGCGGCCCAGGGCGGCCGCCGGACGGTCGTGCTGCGGACGCAA
CGCCTGGGCGGGGCGGCGGA

Downstream 100 bases:

>100_bases
AGAATTTGGTTCAACCCCCCAGAGGACAGGCCAGCACAGTGCCATTGCCCCCCAGATCGCCCGCGTGCGCCCCATGATCA
TGCGCGACCTGTTCGCATGG

Product: pseudopilin J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSAGRSSGQQGFTLVEILVALVVFSLVLLALERGFQAATLVFERQRGLLAAQAELGAVDRFLRALVQYADAGGARTGPVF
VGRAHGFVLRGPLPQALGVPGGTEHLGQRADFRLSVDGGHRLVLAWVPYRHVTETTPPPRQEVLLTGVQDIGCDYYSAGH
WDSGWYGNGLPVLVRIRIVFPAGDRRRWPDIVAAPVTEPAPG

Sequences:

>Translated_202_residues
MSAGRSSGQQGFTLVEILVALVVFSLVLLALERGFQAATLVFERQRGLLAAQAELGAVDRFLRALVQYADAGGARTGPVF
VGRAHGFVLRGPLPQALGVPGGTEHLGQRADFRLSVDGGHRLVLAWVPYRHVTETTPPPRQEVLLTGVQDIGCDYYSAGH
WDSGWYGNGLPVLVRIRIVFPAGDRRRWPDIVAAPVTEPAPG
>Mature_201_residues
SAGRSSGQQGFTLVEILVALVVFSLVLLALERGFQAATLVFERQRGLLAAQAELGAVDRFLRALVQYADAGGARTGPVFV
GRAHGFVLRGPLPQALGVPGGTEHLGQRADFRLSVDGGHRLVLAWVPYRHVTETTPPPRQEVLLTGVQDIGCDYYSAGHW
DSGWYGNGLPVLVRIRIVFPAGDRRRWPDIVAAPVTEPAPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21743; Mature: 21612

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGRSSGQQGFTLVEILVALVVFSLVLLALERGFQAATLVFERQRGLLAAQAELGAVDR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHH
FLRALVQYADAGGARTGPVFVGRAHGFVLRGPLPQALGVPGGTEHLGQRADFRLSVDGGH
HHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCHHHHCCCCCEEEEECCCC
RLVLAWVPYRHVTETTPPPRQEVLLTGVQDIGCDYYSAGHWDSGWYGNGLPVLVRIRIVF
EEEEEECCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
PAGDRRRWPDIVAAPVTEPAPG
CCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
SAGRSSGQQGFTLVEILVALVVFSLVLLALERGFQAATLVFERQRGLLAAQAELGAVDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHH
FLRALVQYADAGGARTGPVFVGRAHGFVLRGPLPQALGVPGGTEHLGQRADFRLSVDGGH
HHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCHHHHCCCCCEEEEECCCC
RLVLAWVPYRHVTETTPPPRQEVLLTGVQDIGCDYYSAGHWDSGWYGNGLPVLVRIRIVF
EEEEEECCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
PAGDRRRWPDIVAAPVTEPAPG
CCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA