| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162146284
Identifier: 162146284
GI number: 162146284
Start: 456130
End: 456798
Strand: Direct
Name: 162146284
Synonym: GDI_0459
Alternate gene names: NA
Gene position: 456130-456798 (Clockwise)
Preceding gene: 162146282
Following gene: 162146285
Centisome position: 11.56
GC content: 62.78
Gene sequence:
>669_bases ATGGCTCAGTTCCGTCCCAAATACATCACGTTCGACTGCTACGGCACGCTCATCTACTTCGAAATGGCCAATGCCGCGCG CGATCTGTACGGTGACCGGCTGGACGAGGCGGAGATGCAGGAGTTCATCAGGAACTTCTCGGGTTATCGCTTCGACGAGG TCATGGGCGACTGGAAGCCGTATCACGAGGTCGTCCACAACGCGCTGGAGCGGACCTGCAAACGCCGCGGCGTGACGTTC CACGACGACGATGCCAGGCTGGTCTACGAGCGCGTGCCGACCTGGGGCCCGCACCCGGATGTGCCGGCGGGGCTGGCGAA GGTGGCCAGGGAAATCCCGCTGGTCATCCTGTCGAACGCGATGGATGCGCAGATTCCCGACAACGTCGCCAGGCTGGGCG CGCCGTTCCACGCGGTGTTCACCGCGCAGCAGGCGCAGGCCTACAAGCCGCGCTTCAGGCCGTTCGAATACATGTTCGAC GAACTCGGCTGCGGCCCCGAGGACATCCTGCACTGCTCGTCCTCGTTCCGCTATGACCTGATGTCCGCGCACGATCTGGG CATCAGGAACAAGGTCTGGGTCAATCGCGGCCACGAACCCGCGAATCCCTATTACGAGTATGTCGAAATCCCGGACATTT CCGGCCTGGCCGGTGTCGTGGGACTGTAA
Upstream 100 bases:
>100_bases CCGCCTCCGAGATCATTGATTCGGATGCGGCGGCCCGGCGGGGGGCTTCTATGATCGGATATCGCAGAACGCATCCATCA GCGGCAGAGGATCGTCAGAC
Downstream 100 bases:
>100_bases AGGTCAAGACCATGAAATTCGCCTCCTACTGGCATGACACGGCCCCCGTCTTCGACAAGGGCGCGGGCGGGCCGGTCGAT GGCCACTATGACGTCGCGGT
Product: haloalkanoic acid dehalogenase
Products: NA
Alternate protein names: HAD Family Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase I; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; Dehalogenase Protein; HAD Superfamily Haloalkanoic Acid Dehalogenase; Haloacetate Dehalogenase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKPYHEVVHNALERTCKRRGVTF HDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNAMDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFD ELGCGPEDILHCSSSFRYDLMSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL
Sequences:
>Translated_222_residues MAQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKPYHEVVHNALERTCKRRGVTF HDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNAMDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFD ELGCGPEDILHCSSSFRYDLMSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL >Mature_221_residues AQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKPYHEVVHNALERTCKRRGVTFH DDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNAMDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFDE LGCGPEDILHCSSSFRYDLMSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25475; Mature: 25344
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKP CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCH YHEVVHNALERTCKRRGVTFHDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNA HHHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHEECCC MDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFDELGCGPEDILHCSSSFRYDL CCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHH MSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL HHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHCC >Mature Secondary Structure AQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKP CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCH YHEVVHNALERTCKRRGVTFHDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNA HHHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHEECCC MDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFDELGCGPEDILHCSSSFRYDL CCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHH MSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL HHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA