Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is 162146284

Identifier: 162146284

GI number: 162146284

Start: 456130

End: 456798

Strand: Direct

Name: 162146284

Synonym: GDI_0459

Alternate gene names: NA

Gene position: 456130-456798 (Clockwise)

Preceding gene: 162146282

Following gene: 162146285

Centisome position: 11.56

GC content: 62.78

Gene sequence:

>669_bases
ATGGCTCAGTTCCGTCCCAAATACATCACGTTCGACTGCTACGGCACGCTCATCTACTTCGAAATGGCCAATGCCGCGCG
CGATCTGTACGGTGACCGGCTGGACGAGGCGGAGATGCAGGAGTTCATCAGGAACTTCTCGGGTTATCGCTTCGACGAGG
TCATGGGCGACTGGAAGCCGTATCACGAGGTCGTCCACAACGCGCTGGAGCGGACCTGCAAACGCCGCGGCGTGACGTTC
CACGACGACGATGCCAGGCTGGTCTACGAGCGCGTGCCGACCTGGGGCCCGCACCCGGATGTGCCGGCGGGGCTGGCGAA
GGTGGCCAGGGAAATCCCGCTGGTCATCCTGTCGAACGCGATGGATGCGCAGATTCCCGACAACGTCGCCAGGCTGGGCG
CGCCGTTCCACGCGGTGTTCACCGCGCAGCAGGCGCAGGCCTACAAGCCGCGCTTCAGGCCGTTCGAATACATGTTCGAC
GAACTCGGCTGCGGCCCCGAGGACATCCTGCACTGCTCGTCCTCGTTCCGCTATGACCTGATGTCCGCGCACGATCTGGG
CATCAGGAACAAGGTCTGGGTCAATCGCGGCCACGAACCCGCGAATCCCTATTACGAGTATGTCGAAATCCCGGACATTT
CCGGCCTGGCCGGTGTCGTGGGACTGTAA

Upstream 100 bases:

>100_bases
CCGCCTCCGAGATCATTGATTCGGATGCGGCGGCCCGGCGGGGGGCTTCTATGATCGGATATCGCAGAACGCATCCATCA
GCGGCAGAGGATCGTCAGAC

Downstream 100 bases:

>100_bases
AGGTCAAGACCATGAAATTCGCCTCCTACTGGCATGACACGGCCCCCGTCTTCGACAAGGGCGCGGGCGGGCCGGTCGAT
GGCCACTATGACGTCGCGGT

Product: haloalkanoic acid dehalogenase

Products: NA

Alternate protein names: HAD Family Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase I; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; Dehalogenase Protein; HAD Superfamily Haloalkanoic Acid Dehalogenase; Haloacetate Dehalogenase

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKPYHEVVHNALERTCKRRGVTF
HDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNAMDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFD
ELGCGPEDILHCSSSFRYDLMSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL

Sequences:

>Translated_222_residues
MAQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKPYHEVVHNALERTCKRRGVTF
HDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNAMDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFD
ELGCGPEDILHCSSSFRYDLMSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL
>Mature_221_residues
AQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKPYHEVVHNALERTCKRRGVTFH
DDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNAMDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFDE
LGCGPEDILHCSSSFRYDLMSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25475; Mature: 25344

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKP
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCH
YHEVVHNALERTCKRRGVTFHDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNA
HHHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHEECCC
MDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFDELGCGPEDILHCSSSFRYDL
CCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHH
MSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL
HHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHCC
>Mature Secondary Structure 
AQFRPKYITFDCYGTLIYFEMANAARDLYGDRLDEAEMQEFIRNFSGYRFDEVMGDWKP
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCH
YHEVVHNALERTCKRRGVTFHDDDARLVYERVPTWGPHPDVPAGLAKVAREIPLVILSNA
HHHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHEECCC
MDAQIPDNVARLGAPFHAVFTAQQAQAYKPRFRPFEYMFDELGCGPEDILHCSSSFRYDL
CCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHH
MSAHDLGIRNKVWVNRGHEPANPYYEYVEIPDISGLAGVVGL
HHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA