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The map label for this gene is yddH [H]

Identifier: 162146230

GI number: 162146230

Start: 404184

End: 404741

Strand: Direct

Name: yddH [H]

Synonym: GDI_0404

Alternate gene names: 162146230

Gene position: 404184-404741 (Clockwise)

Preceding gene: 162146229

Following gene: 162146233

Centisome position: 10.25

GC content: 57.71

Gene sequence:

>558_bases
ATGCAGCCGTTTCCCCTTGATCGGGCTTTTACCTTTCTGGAATCCGGGCCGGTAACGCTCGTGACCACGCATGACGGGGG
GCGCGACAACATCATGACCATCACCTGGACCATGGTGCTGGATTTCGATTCGCGTTTCGCGATTACCACTGGTCCATGGA
ATTACTCATGGAAGGCGATCGGGAAGACGCGTGAATGTGTGATCGCCATCCCGTCCGCAGACATGCTCGATACAGTGGTG
GGGATCGGTCTCTGCTCTGGCAAGGACACGGACAAGTTCGAGAAATTCGGTCTTGCCCGTCGCAAGGCTGACAATGTGAA
AGCGCCGCTTCTGACTGAGTGTCTGGCGAACATCGAATGTCGCGTCGTCGACATCATCGAGCCGTATGGCATTGTCATTC
TTGAAGGGATCGTCGCGCATGCCGATCCGCATCGCGCGGATCGGTCTCCCCTGCATGCCATTGGCGATGGCACCTTTGTG
ACCGACGGGCCGGTGCTGGATCGGCGCACGATGATGCGCCCGAAACTGCCGCCGAGTGTCCTCACACGTAAATCGTAA

Upstream 100 bases:

>100_bases
CGCTTCCTGTTCTTCATGATACTGTTGACGCAGCGCAATGCAGAGCGCGCAGTAGCCGTGCTACCAGTTCTGGGTCGGCG
ACAACCGAACGGAGACTGCC

Downstream 100 bases:

>100_bases
TCCCCAGATGATCATTCCCGTGGGGTCTGCCGCAGGCTTCGACCCTTCTGGTGGGCGACGATCCCTCGCTTGACCGCCGC
GAATATGTCCACCGGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MQPFPLDRAFTFLESGPVTLVTTHDGGRDNIMTITWTMVLDFDSRFAITTGPWNYSWKAIGKTRECVIAIPSADMLDTVV
GIGLCSGKDTDKFEKFGLARRKADNVKAPLLTECLANIECRVVDIIEPYGIVILEGIVAHADPHRADRSPLHAIGDGTFV
TDGPVLDRRTMMRPKLPPSVLTRKS

Sequences:

>Translated_185_residues
MQPFPLDRAFTFLESGPVTLVTTHDGGRDNIMTITWTMVLDFDSRFAITTGPWNYSWKAIGKTRECVIAIPSADMLDTVV
GIGLCSGKDTDKFEKFGLARRKADNVKAPLLTECLANIECRVVDIIEPYGIVILEGIVAHADPHRADRSPLHAIGDGTFV
TDGPVLDRRTMMRPKLPPSVLTRKS
>Mature_185_residues
MQPFPLDRAFTFLESGPVTLVTTHDGGRDNIMTITWTMVLDFDSRFAITTGPWNYSWKAIGKTRECVIAIPSADMLDTVV
GIGLCSGKDTDKFEKFGLARRKADNVKAPLLTECLANIECRVVDIIEPYGIVILEGIVAHADPHRADRSPLHAIGDGTFV
TDGPVLDRRTMMRPKLPPSVLTRKS

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=178, Percent_Identity=30.8988764044944, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20413; Mature: 20413

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPFPLDRAFTFLESGPVTLVTTHDGGRDNIMTITWTMVLDFDSRFAITTGPWNYSWKAI
CCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEEEC
GKTRECVIAIPSADMLDTVVGIGLCSGKDTDKFEKFGLARRKADNVKAPLLTECLANIEC
CCCCEEEEECCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCE
RVVDIIEPYGIVILEGIVAHADPHRADRSPLHAIGDGTFVTDGPVLDRRTMMRPKLPPSV
EEEEEECCCCEEEEEHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHCCCCCCHHH
LTRKS
HCCCC
>Mature Secondary Structure
MQPFPLDRAFTFLESGPVTLVTTHDGGRDNIMTITWTMVLDFDSRFAITTGPWNYSWKAI
CCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEEEC
GKTRECVIAIPSADMLDTVVGIGLCSGKDTDKFEKFGLARRKADNVKAPLLTECLANIEC
CCCCEEEEECCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCE
RVVDIIEPYGIVILEGIVAHADPHRADRSPLHAIGDGTFVTDGPVLDRRTMMRPKLPPSV
EEEEEECCCCEEEEEHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHCCCCCCHHH
LTRKS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]