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The map label for this gene is 162146223

Identifier: 162146223

GI number: 162146223

Start: 397272

End: 398345

Strand: Direct

Name: 162146223

Synonym: GDI_0397

Alternate gene names: NA

Gene position: 397272-398345 (Clockwise)

Preceding gene: 162146222

Following gene: 162146224

Centisome position: 10.07

GC content: 60.61

Gene sequence:

>1074_bases
ATGATGCCGGCCGCCGATAGCTGGCGCCAGCCTGACCGCCGTTTTGTGGTCACGGGATCGGCACGACCCCGTGACATCCG
TGATCTGATGGGGCGTCCGTTTTTCGCGCTGGGGCACGTGGCGCGCCTTGAGCCTCTTCGCTACCGCTCGCGTCAGATGG
AGATCGTTGTCGAAGCCTCGGCTCCTCTGGGCATGGCGACCATCCGGGACGCCGATATCCTGCTCTGGCTGACCGGCCAG
ATCGTCGATGCCCTCAATCATGATCTGTGGGTATCGCGCCATGTGCGCTTCACGCCCTGGCGCCTGTTCCAGGATCTGGG
ATGGGCTGACGGCACCCACCAGTATCGCCGGCTTCATGGCGCCCTCGCGCGTCTGGCGGAAACACGCGTCACCACCAGCC
TGCGGCAGGGGCCGGAGTGGCGCGAGAAGCCGTTCGCCTGGATCAGTGACGTCCGGATTTCCCGTGAGGACGGGGTGGCC
CTGACCCTGCCGGACTGGCTCATGGAGATGGCCTGTGATCGCTCTCATGTCCTGAGTGTCGATCCCGCCTATTTCCGCCT
TTATGGCGGCCTGGAGCGGTGGCTTTACCGTCTGGCGCGCCGACATGCCGGTCGGCAGAAAGACGGGTGGCGTTTCGATC
TTCGTGATCTTCATGCCCGGTCCGGCACCCTCTCTCCCTGGCGGAATTTCGTGATCGACGTCGCCGGCATTGCCCGTCGC
CAGGTCGTCCCAGGTTATGACTGCAAGGTCATTTATGGCGGAAAACAGCCAGTCCTGCGTATCTCCCCAACGGTATTATC
CACCGGTTCTGTGGATAACCGTGTGAATTCTACCGTTGGTCAGGATGCGGATCATACCATTGCTCACGGTGCGGAAATAC
CGTTGCTGACGGTGCAGAAAACGTCGCAGTGCGTTGTTTGCAAAAGCGGAATCAGCCCCGTAACTTATATAACTAATATA
ATAACTTATTATGTAGGGGATTCCGGTTTTTCGGTTTCCCTTCCGGTCGCCCGGTCGGGGCATGGAGAAAAGGCTCGGGA
AGCGGTCGCGGATCGCATGGTCGGTGTCCCATGA

Upstream 100 bases:

>100_bases
CCACCGGGGACGGTGGCGGCATTCCCATGCCATCCGATCCCCGCGCCTATATCATCCGCTTGCAGGCGAAGGCCCGCAAG
GCGCAGCGGAGTGCCGGACG

Downstream 100 bases:

>100_bases
CCGCCCGCTCTTTCCGGCCGGCCGACGTTGTCCTCACCACGGTCGAACTGACCTGGATCGAGAAGCGCATCGAACACTGG
GTTCGCTTCGGCCACCCCGT

Product: replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MMPAADSWRQPDRRFVVTGSARPRDIRDLMGRPFFALGHVARLEPLRYRSRQMEIVVEASAPLGMATIRDADILLWLTGQ
IVDALNHDLWVSRHVRFTPWRLFQDLGWADGTHQYRRLHGALARLAETRVTTSLRQGPEWREKPFAWISDVRISREDGVA
LTLPDWLMEMACDRSHVLSVDPAYFRLYGGLERWLYRLARRHAGRQKDGWRFDLRDLHARSGTLSPWRNFVIDVAGIARR
QVVPGYDCKVIYGGKQPVLRISPTVLSTGSVDNRVNSTVGQDADHTIAHGAEIPLLTVQKTSQCVVCKSGISPVTYITNI
ITYYVGDSGFSVSLPVARSGHGEKAREAVADRMVGVP

Sequences:

>Translated_357_residues
MMPAADSWRQPDRRFVVTGSARPRDIRDLMGRPFFALGHVARLEPLRYRSRQMEIVVEASAPLGMATIRDADILLWLTGQ
IVDALNHDLWVSRHVRFTPWRLFQDLGWADGTHQYRRLHGALARLAETRVTTSLRQGPEWREKPFAWISDVRISREDGVA
LTLPDWLMEMACDRSHVLSVDPAYFRLYGGLERWLYRLARRHAGRQKDGWRFDLRDLHARSGTLSPWRNFVIDVAGIARR
QVVPGYDCKVIYGGKQPVLRISPTVLSTGSVDNRVNSTVGQDADHTIAHGAEIPLLTVQKTSQCVVCKSGISPVTYITNI
ITYYVGDSGFSVSLPVARSGHGEKAREAVADRMVGVP
>Mature_357_residues
MMPAADSWRQPDRRFVVTGSARPRDIRDLMGRPFFALGHVARLEPLRYRSRQMEIVVEASAPLGMATIRDADILLWLTGQ
IVDALNHDLWVSRHVRFTPWRLFQDLGWADGTHQYRRLHGALARLAETRVTTSLRQGPEWREKPFAWISDVRISREDGVA
LTLPDWLMEMACDRSHVLSVDPAYFRLYGGLERWLYRLARRHAGRQKDGWRFDLRDLHARSGTLSPWRNFVIDVAGIARR
QVVPGYDCKVIYGGKQPVLRISPTVLSTGSVDNRVNSTVGQDADHTIAHGAEIPLLTVQKTSQCVVCKSGISPVTYITNI
ITYYVGDSGFSVSLPVARSGHGEKAREAVADRMVGVP

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 40292; Mature: 40292

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPAADSWRQPDRRFVVTGSARPRDIRDLMGRPFFALGHVARLEPLRYRSRQMEIVVEAS
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCHHHHCCCEEEEEEEEC
APLGMATIRDADILLWLTGQIVDALNHDLWVSRHVRFTPWRLFQDLGWADGTHQYRRLHG
CCCCEEEECCCCEEEEEHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH
ALARLAETRVTTSLRQGPEWREKPFAWISDVRISREDGVALTLPDWLMEMACDRSHVLSV
HHHHHHHHHHHHHHHCCCCHHHCCCHHHHHEEEECCCCEEEECHHHHHHHHCCCCCEEEC
DPAYFRLYGGLERWLYRLARRHAGRQKDGWRFDLRDLHARSGTLSPWRNFVIDVAGIARR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHCCCCCCHHHHHHHHHHHHHHH
QVVPGYDCKVIYGGKQPVLRISPTVLSTGSVDNRVNSTVGQDADHTIAHGAEIPLLTVQK
CCCCCCCEEEEECCCCCEEEECCCEEECCCCCCHHHHHCCCCCCCHHHCCCCCCEEEECC
TSQCVVCKSGISPVTYITNIITYYVGDSGFSVSLPVARSGHGEKAREAVADRMVGVP
CCCEEEECCCCCHHHHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMPAADSWRQPDRRFVVTGSARPRDIRDLMGRPFFALGHVARLEPLRYRSRQMEIVVEAS
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCHHHHCCCEEEEEEEEC
APLGMATIRDADILLWLTGQIVDALNHDLWVSRHVRFTPWRLFQDLGWADGTHQYRRLHG
CCCCEEEECCCCEEEEEHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH
ALARLAETRVTTSLRQGPEWREKPFAWISDVRISREDGVALTLPDWLMEMACDRSHVLSV
HHHHHHHHHHHHHHHCCCCHHHCCCHHHHHEEEECCCCEEEECHHHHHHHHCCCCCEEEC
DPAYFRLYGGLERWLYRLARRHAGRQKDGWRFDLRDLHARSGTLSPWRNFVIDVAGIARR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHCCCCCCHHHHHHHHHHHHHHH
QVVPGYDCKVIYGGKQPVLRISPTVLSTGSVDNRVNSTVGQDADHTIAHGAEIPLLTVQK
CCCCCCCEEEEECCCCCEEEECCCEEECCCCCCHHHHHCCCCCCCHHHCCCCCCEEEECC
TSQCVVCKSGISPVTYITNIITYYVGDSGFSVSLPVARSGHGEKAREAVADRMVGVP
CCCEEEECCCCCHHHHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]