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The map label for this gene is 162146218

Identifier: 162146218

GI number: 162146218

Start: 395573

End: 395824

Strand: Reverse

Name: 162146218

Synonym: GDI_0392

Alternate gene names: NA

Gene position: 395824-395573 (Counterclockwise)

Preceding gene: 162146231

Following gene: 162146213

Centisome position: 10.04

GC content: 66.67

Gene sequence:

>252_bases
ATGGACATCCGAGGACTTTTCGGCGCGAACGTGAGGCGCCTGCGACGCGCCGCCGGTCTCAGCCAGGAGGCCCTGGCGGA
ACGGATGGGCGTGGACCGCGCCTATATCAGCTGGATCGAGACCGGGCGCCAGAACGCGACGCTGCTTTCGCTGTGGCATG
CGTCGCAGGCGCTGGGTGTGCGGCCGGCGACGTTACTGGATGAAAGCCACGTTGCCGCTACAGAAGAGGCACCCACCGGC
GGGAAGCCATAA

Upstream 100 bases:

>100_bases
CATCACGTGATGCCTATGGCGCATCATAGGAGAAGGCGTTTGACGTTCCGTGTATTATAATACGTAGCGCGATAATACAC
AAATCGTTCCTATCCTGCGG

Downstream 100 bases:

>100_bases
CTGGCCTGAAGAAGAAAGCCCCTCCGGCGTACCGGAGGGGCCGGCGGTGGTCAGTCCCCGTTACGCGGGCGCTGGCGGCT
CCAGATCAGGTTGTAGGCGC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MDIRGLFGANVRRLRRAAGLSQEALAERMGVDRAYISWIETGRQNATLLSLWHASQALGVRPATLLDESHVAATEEAPTG
GKP

Sequences:

>Translated_83_residues
MDIRGLFGANVRRLRRAAGLSQEALAERMGVDRAYISWIETGRQNATLLSLWHASQALGVRPATLLDESHVAATEEAPTG
GKP
>Mature_83_residues
MDIRGLFGANVRRLRRAAGLSQEALAERMGVDRAYISWIETGRQNATLLSLWHASQALGVRPATLLDESHVAATEEAPTG
GKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8984; Mature: 8984

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRGLFGANVRRLRRAAGLSQEALAERMGVDRAYISWIETGRQNATLLSLWHASQALGV
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
RPATLLDESHVAATEEAPTGGKP
CCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDIRGLFGANVRRLRRAAGLSQEALAERMGVDRAYISWIETGRQNATLLSLWHASQALGV
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
RPATLLDESHVAATEEAPTGGKP
CCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]