| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is ucpA [C]
Identifier: 162146180
GI number: 162146180
Start: 364619
End: 365455
Strand: Direct
Name: ucpA [C]
Synonym: GDI_0352
Alternate gene names: 162146180
Gene position: 364619-365455 (Clockwise)
Preceding gene: 162146179
Following gene: 162146181
Centisome position: 9.24
GC content: 67.26
Gene sequence:
>837_bases ATGACGACGAAGACAGGCGACCTGACGGGCAAGGTGGCCCTGGTCACGGGCGGCACGCAGGGGCTGGGTGCCGCCATCGC CACCGTGTTCGCGCAGCGCGGCGCCAAGGGGATCGTGATCTGCGGCCGCAACCGTCACAAGGGTGAAGACGTCGCGGCCC GGCTGCGGCGCGATTTCGATACCGACGTGCGCTTCGTGGCCGCCGACCTCGCGGACATGGACGACGTGCGGGCCGTCGTG CAGGCGTGCGACGGCGCGTTCGGCCGGATCGACGCGCTGGTGAACGCGGCGGGACTGACCGATCGCGGCACCATCCTGGA CACCACGCCCGAATTGTTCGACCGCATGATGGCGGTCAACGTGCGCGCGCTCTTTTTCCTGATCCAGGACGCCGTGAAGA TCATGATCCGGGAATCGACCGAAGGCACGATCGTCAATATCGGCTCGATGTCCGCCATGGGCGGGCAGCCTTTCATCGCC GCCTATTGCGCCTCGAAGGGGGCGCTGGAAACGCTGACCCGCAATACCGCCTATGCGCTGCTGCGCAATCGCATCCGGGT CAACGCGCTGAATATCGGCTGGATGGCGTCGGACGGCGAAGACCGCATCCAGCGCGAATTCCACGGCGCGTCCGAGGGCT GGCTGAAGGACGCGGCCCAGACGCAGCCCTTCGGCCGCCTGATCAGCCCCGAGGAGGTCGCGCGCGCCTGCGCCTATCTG TCCAGCGCCGAATCCGGCCTGATGACGGGATCGGTCATCTGTTTCGACCAGTCGGTCTGGGGCGCGTACGATGATTCGCC CCATCCCGCCCAGGCCATGCGCCTGCACGGCGAATAA
Upstream 100 bases:
>100_bases CAGTTGATGCACGAGGCCCTGGACGAGCGGTGGAGCGAGCATCTGTTCGTCGAGGCGCTGCTGGCGCAGGACGCAAGAAA AAAAGGGGAGTAAGCGAAAC
Downstream 100 bases:
>100_bases CGAAAAAAAGAAACCAGGAGCAGGTCATGACGAAAAACGTTTCAAGACGCACGCTGGGCATAGGGCTGATCGGCAGCGGT TTCATGGGTAAGGCCCATGC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTTKTGDLTGKVALVTGGTQGLGAAIATVFAQRGAKGIVICGRNRHKGEDVAARLRRDFDTDVRFVAADLADMDDVRAVV QACDGAFGRIDALVNAAGLTDRGTILDTTPELFDRMMAVNVRALFFLIQDAVKIMIRESTEGTIVNIGSMSAMGGQPFIA AYCASKGALETLTRNTAYALLRNRIRVNALNIGWMASDGEDRIQREFHGASEGWLKDAAQTQPFGRLISPEEVARACAYL SSAESGLMTGSVICFDQSVWGAYDDSPHPAQAMRLHGE
Sequences:
>Translated_278_residues MTTKTGDLTGKVALVTGGTQGLGAAIATVFAQRGAKGIVICGRNRHKGEDVAARLRRDFDTDVRFVAADLADMDDVRAVV QACDGAFGRIDALVNAAGLTDRGTILDTTPELFDRMMAVNVRALFFLIQDAVKIMIRESTEGTIVNIGSMSAMGGQPFIA AYCASKGALETLTRNTAYALLRNRIRVNALNIGWMASDGEDRIQREFHGASEGWLKDAAQTQPFGRLISPEEVARACAYL SSAESGLMTGSVICFDQSVWGAYDDSPHPAQAMRLHGE >Mature_277_residues TTKTGDLTGKVALVTGGTQGLGAAIATVFAQRGAKGIVICGRNRHKGEDVAARLRRDFDTDVRFVAADLADMDDVRAVVQ ACDGAFGRIDALVNAAGLTDRGTILDTTPELFDRMMAVNVRALFFLIQDAVKIMIRESTEGTIVNIGSMSAMGGQPFIAA YCASKGALETLTRNTAYALLRNRIRVNALNIGWMASDGEDRIQREFHGASEGWLKDAAQTQPFGRLISPEEVARACAYLS SAESGLMTGSVICFDQSVWGAYDDSPHPAQAMRLHGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=30.0813008130081, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=29.296875, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=33.1632653061224, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=28.2868525896414, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=26.4822134387352, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI32483357, Length=262, Percent_Identity=29.3893129770992, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=30.0395256916996, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI7706318, Length=166, Percent_Identity=30.7228915662651, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI33667109, Length=209, Percent_Identity=29.6650717703349, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=28.8617886178862, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI31542939, Length=204, Percent_Identity=27.9411764705882, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI126723750, Length=265, Percent_Identity=27.1698113207547, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI10190704, Length=269, Percent_Identity=28.996282527881, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI126723191, Length=191, Percent_Identity=31.9371727748691, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI59889578, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI142976729, Length=221, Percent_Identity=26.2443438914027, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=24.21875, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4758504, Length=265, Percent_Identity=28.6792452830189, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=28.3236994219653, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI83715985, Length=178, Percent_Identity=31.4606741573034, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI146231950, Length=116, Percent_Identity=36.2068965517241, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=31.7829457364341, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=32.156862745098, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=29.8804780876494, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=33.0645161290323, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI87082160, Length=192, Percent_Identity=35.9375, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1789378, Length=259, Percent_Identity=28.957528957529, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=28.3400809716599, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=27.1653543307087, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=29.718875502008, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789057, Length=184, Percent_Identity=29.8913043478261, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367365, Length=258, Percent_Identity=30.6201550387597, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787526, Length=189, Percent_Identity=29.1005291005291, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=27.5590551181102, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=32.8, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=32.3886639676113, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI193204405, Length=254, Percent_Identity=33.8582677165354, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=33.4645669291339, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=31.2741312741313, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=31.6602316602317, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=31.5384615384615, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=28.4644194756554, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17560220, Length=195, Percent_Identity=33.8461538461538, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=31.7269076305221, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=29.9242424242424, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17559104, Length=244, Percent_Identity=29.9180327868852, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17562990, Length=241, Percent_Identity=28.6307053941909, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560150, Length=244, Percent_Identity=27.8688524590164, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=29.7619047619048, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17563726, Length=244, Percent_Identity=27.8688524590164, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=29.1828793774319, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17551412, Length=259, Percent_Identity=28.957528957529, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=29.277566539924, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=26.7206477732794, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=29.3650793650794, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17544670, Length=273, Percent_Identity=26.007326007326, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562904, Length=253, Percent_Identity=25.6916996047431, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=28.4090909090909, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538182, Length=197, Percent_Identity=32.48730964467, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17564282, Length=157, Percent_Identity=33.7579617834395, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17561272, Length=256, Percent_Identity=29.296875, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=26, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538486, Length=197, Percent_Identity=29.4416243654822, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71997402, Length=164, Percent_Identity=28.6585365853659, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193203115, Length=160, Percent_Identity=30, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193203117, Length=159, Percent_Identity=29.559748427673, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17565030, Length=275, Percent_Identity=28.3636363636364, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17570069, Length=167, Percent_Identity=26.9461077844311, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508895, Length=162, Percent_Identity=30.2469135802469, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=23.828125, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=269, Percent_Identity=26.3940520446097, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=35.0806451612903, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI23397609, Length=265, Percent_Identity=33.5849056603774, Blast_Score=124, Evalue=5e-29, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=32.5396825396825, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=33.8709677419355, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=29.4117647058824, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=29.2490118577075, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24643142, Length=260, Percent_Identity=29.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=29.9610894941634, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007236, Length=196, Percent_Identity=26.530612244898, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI116007238, Length=169, Percent_Identity=29.585798816568, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI281364892, Length=207, Percent_Identity=27.536231884058, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24580925, Length=216, Percent_Identity=27.3148148148148, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI21358495, Length=197, Percent_Identity=25.3807106598985, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI18859837, Length=196, Percent_Identity=29.5918367346939, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 29794; Mature: 29663
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKTGDLTGKVALVTGGTQGLGAAIATVFAQRGAKGIVICGRNRHKGEDVAARLRRDFD CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCC TDVRFVAADLADMDDVRAVVQACDGAFGRIDALVNAAGLTDRGTILDTTPELFDRMMAVN CCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHH VRALFFLIQDAVKIMIRESTEGTIVNIGSMSAMGGQPFIAAYCASKGALETLTRNTAYAL HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH LRNRIRVNALNIGWMASDGEDRIQREFHGASEGWLKDAAQTQPFGRLISPEEVARACAYL HHHCEEEEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH SSAESGLMTGSVICFDQSVWGAYDDSPHPAQAMRLHGE HHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHEECCC >Mature Secondary Structure TTKTGDLTGKVALVTGGTQGLGAAIATVFAQRGAKGIVICGRNRHKGEDVAARLRRDFD CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCC TDVRFVAADLADMDDVRAVVQACDGAFGRIDALVNAAGLTDRGTILDTTPELFDRMMAVN CCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHH VRALFFLIQDAVKIMIRESTEGTIVNIGSMSAMGGQPFIAAYCASKGALETLTRNTAYAL HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH LRNRIRVNALNIGWMASDGEDRIQREFHGASEGWLKDAAQTQPFGRLISPEEVARACAYL HHHCEEEEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH SSAESGLMTGSVICFDQSVWGAYDDSPHPAQAMRLHGE HHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]