BacMap

Definition	Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession	NC_010125
Length	3,944,163

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The map label for this gene is ykvO [H]

Identifier: 162146053

GI number: 162146053

Start: 237196

End: 237930

Strand: Direct

Name: ykvO [H]

Synonym: GDI_0221

Alternate gene names: 162146053

Gene position: 237196-237930 (Clockwise)

Preceding gene: 162146051

Following gene: 162146055

Centisome position: 6.01

GC content: 63.81

Gene sequence:

>735_bases
ATGGGAAAGCTCGAAGGCAAGGTTGCAGTCATCACAGGCGGATCGAGCGGCATGGCGCTGGCGAGCGCCAGGCGGTTCGT
TGAAGAAGGCGCCTATGTGTTCATCACGGGCCGGAGGCAGGAGGTGCTGGACGAGGCCGTCAGGCTGATCGGCCGGAACG
TGACCGGCGTGCGCGGCGATGCGGCCAATCTCGACGACCTCGACCGCCTGTTCGATACGGTCAGGCGGGAAAAGGGCAGG
ATCGACGTGCTGTATGCAAGCGCCGGCACGGGCGAAGCCGCGCCGCTGGGCGAGATTACCGAGCAGCATTTCGATACAAC
CTTCAACCTGAATGCGCGCGGCACGCTGTTCACGGTCCAGAAGGCGTTGCCGCTGTTCAACGACGGCGGGTCGATCTTCA
TGACCGGGTCGGTTGCGTCGATCAAAGGTTTCCCCGGTTACAGCGTGTATGCGGCGAGCAAGGCGACGCTGCACGCCTTC
GCACGCGGGTGGCTCAACGAACTGAAGGGCCGGAACATCCGGGTGAACGTGCTGCACCCGGGGCCGATCGCCACACCGAT
GCAGGACCAGGTTCTGACCGAGGACGCGAAGCGGATGTTCGAATCCCTGATCCCGCGGGGAACGATGGGTCGTCCCGAGG
AAATCGCGGCAGCCGCGCTGTTTCTGGCTTCGGACGATTCCAGCTTCGTGAACGGGGTGGAACTGTCTGTCGATGGCGGC
TTCTCGGCCATCTGA

Upstream 100 bases:

>100_bases
TGTGCGCGCTTCCGCACTCAACGCCTGACGCCGGCAGACCTATGTCGAGGGTCTCGGGGACTTCCCCGAACGATCGAAGA
CGGGCCTGAAAGGAAAAGTC

Downstream 100 bases:

>100_bases
ACGCGCGCCGGATCGCGGAAAGCGGCCGACCGGCGGGGACGGGCGTGTCCATGGTGGAACGACTTCCGCGCTGCACGGTC
GGCCTGTCCGCAGCATCAAT

Product: 3-oxoacyl-[acyl-carrier-protein] reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQEVLDEAVRLIGRNVTGVRGDAANLDDLDRLFDTVRREKGR
IDVLYASAGTGEAAPLGEITEQHFDTTFNLNARGTLFTVQKALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAF
ARGWLNELKGRNIRVNVLHPGPIATPMQDQVLTEDAKRMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGVELSVDGG
FSAI

Sequences:

>Translated_244_residues
MGKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQEVLDEAVRLIGRNVTGVRGDAANLDDLDRLFDTVRREKGR
IDVLYASAGTGEAAPLGEITEQHFDTTFNLNARGTLFTVQKALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAF
ARGWLNELKGRNIRVNVLHPGPIATPMQDQVLTEDAKRMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGVELSVDGG
FSAI
>Mature_243_residues
GKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQEVLDEAVRLIGRNVTGVRGDAANLDDLDRLFDTVRREKGRI
DVLYASAGTGEAAPLGEITEQHFDTTFNLNARGTLFTVQKALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAFA
RGWLNELKGRNIRVNVLHPGPIATPMQDQVLTEDAKRMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGVELSVDGGF
SAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=32.6530612244898, Blast_Score=127, Evalue=9e-30,
Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=30.6451612903226, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=30.6122448979592, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=30.8333333333333, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=30.4, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=30.8300395256917, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=31.8681318681319, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=31.5789473684211, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=26.3779527559055, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=28.9156626506024, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=31.2252964426877, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=31.140350877193, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI4758504, Length=253, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4503301, Length=248, Percent_Identity=27.8225806451613, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI223718074, Length=196, Percent_Identity=30.6122448979592, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4504505, Length=250, Percent_Identity=25.6, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.0813008130081, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI2367365, Length=252, Percent_Identity=34.9206349206349, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=34.1463414634146, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=28.968253968254, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=30.1652892561983, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=31.4516129032258, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=29.7959183673469, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=31.1475409836066, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=30.8943089430894, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=27.0161290322581, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786701, Length=219, Percent_Identity=31.5068493150685, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787820, Length=177, Percent_Identity=28.2485875706215, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=28.1632653061224, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787545, Length=255, Percent_Identity=24.3137254901961, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787526, Length=248, Percent_Identity=27.0161290322581, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=33.596837944664, Blast_Score=128, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=33.9622641509434, Blast_Score=117, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=34.2105263157895, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=29.7619047619048, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=31.7269076305221, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=31.6602316602317, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=31.6981132075472, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=30.9917355371901, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=33.8289962825279, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=32.4528301886792, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=244, Percent_Identity=32.3770491803279, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=31.0606060606061, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=32.6996197718631, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=31.9548872180451, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=30.9433962264151, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=29.3650793650794, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=30.188679245283, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=272, Percent_Identity=30.5147058823529, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=30.6513409961686, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=31.4393939393939, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=30.5660377358491, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=28.9473684210526, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=29.1497975708502, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=28.968253968254, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=26.8939393939394, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17536651, Length=254, Percent_Identity=27.9527559055118, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=27.3809523809524, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=28.6274509803922, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6322067, Length=188, Percent_Identity=28.7234042553192, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=27.8350515463918, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=215, Percent_Identity=28.3720930232558, Blast_Score=72, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=25.5060728744939, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=31.6, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=34.136546184739, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=31.496062992126, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=31.2757201646091, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=32.6848249027237, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=31.7073170731707, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=30.3643724696356, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644337, Length=249, Percent_Identity=32.1285140562249, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581726, Length=222, Percent_Identity=27.9279279279279, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580925, Length=206, Percent_Identity=28.1553398058252, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641232, Length=238, Percent_Identity=26.0504201680672, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26087; Mature: 25956

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQEVLDEAVRLIGRNVTGVRGD
CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC
AANLDDLDRLFDTVRREKGRIDVLYASAGTGEAAPLGEITEQHFDTTFNLNARGTLFTVQ
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHCCCEEECCCCCEEEEEE
KALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAFARGWLNELKGRNIRVNVLHP
CCCCEECCCCCEEEECCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECC
GPIATPMQDQVLTEDAKRMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGVELSVDGG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCCHHCCEEEEECCC
FSAI
CCCC
>Mature Secondary Structure 
GKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQEVLDEAVRLIGRNVTGVRGD
CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC
AANLDDLDRLFDTVRREKGRIDVLYASAGTGEAAPLGEITEQHFDTTFNLNARGTLFTVQ
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHCCCEEECCCCCEEEEEE
KALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAFARGWLNELKGRNIRVNVLHP
CCCCEECCCCCEEEECCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECC
GPIATPMQDQVLTEDAKRMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGVELSVDGG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCCHHCCEEEEECCC
FSAI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]