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The map label for this gene is trbI [H]

Identifier: 162145972

GI number: 162145972

Start: 147239

End: 148414

Strand: Direct

Name: trbI [H]

Synonym: GDI_0138

Alternate gene names: 162145972

Gene position: 147239-148414 (Clockwise)

Preceding gene: 162145971

Following gene: 162145974

Centisome position: 3.73

GC content: 66.84

Gene sequence:

>1176_bases
ATGACCGGGCAGGCACCCACAGTGGGCGAAAATCCCGCACCTGCGTCATCCCCGCCGCCCGATCTGCGTCTGCGGGCTGA
TCGGCCGCGTGTCGTGCGTCTGTCGCGCACCGTGGTCTGGTCGCTGGGTGGGGTCGGCATGGTGGCGGTGGCCTTCGCGC
TGGGTTACGCCCTTCAGGCCAGCCATCGGTCGCCATCAACGGCCGCCACGCAGGACACCGATGTCCGTCCCTCGGCCGAC
GGGCTGGCGGGGCTGCCCGCCGATTATATCGGCAATACCGTGCCGAAGCTCGGGCCAGCACTGCCCGGTGATCTCGGGCG
CGCCATCCTGCATGCGCAAGGGCAGGGGAAGGCGGTCTCCGGCACCGAAGACCACCGCGCCGCGCAGGAGATCGAGGCCG
CGATCGCGAGCCGGCTGTTCGTGCAGACGGGGGAGCGCGACCGTGCCAGCGAACAGGCGACCCCGCCCGCGCCGGGCGCT
CCTGCCTCTCAGGGGCGGGCATCCACCACGACCGGGCCACAGGCCGGAAACATTGCCTTCCTGGAAGGGCAGCCGGATCG
TGCGACAACCAGCCCCGACCGCATTGCGCCGCCTGCCTCACCTTATGTCCTCCAGGCGGGCACGGTGATCGCTGGTGCAC
TGAACACGAAGATCAGTTCCGACCTGCCGGGCCAGATCGTGGGGCACGTCACGCAGAACGTCTATGACAGCCCGACCGGG
CGCTATCTTCTGATCCCCCAGGGTAGCCTGCTGTTCGGGGCTTATAACAGCGGAGTGTCCTTCGGGCAGCAGCGCACGCA
GATCATCTGGACGCGGCTTATATACCCCGACGGCGAGAGCCTCGTGCTGGAGAAGCTGCCCGGTGGTGACGCCATCGGCC
AGTCCGGCCTGTCTGACGAGGTCGACAATCATTGGGGCCAGCTTTTCAAAGCGGCCCTGGTGACCACGCTCCTCAGCGTC
GGCTCCGAGGCGGGCACCAGCCAGAGCGAAAACAATCTGGCCCAGGCAATCCGCTCCGGCGCCAGCAACGGCTTCTCCAT
GGTCGGCAACCGCCTGATCGACCGCAGCCTCAACGTCCAGCCCACCCTGACCGACCGGCCGGGACTACCCTTCACCGTCA
TTCTCAGCCGCGACCTATTGCTCAAACCCTATCAGAATGGAGGAAATTTAAGATGA

Upstream 100 bases:

>100_bases
GGATGATCGTCGATCGGCTGTTTGCCGCCGCCGAATTGCGGCTCGGGGATAAACACAGCGAACAGCGGGTGCGCATCGTC
CGCACCGACGGGCGGCCGTC

Downstream 100 bases:

>100_bases
CAGAGCTGAAGATCACGGAAATCCCTGACGAGAAACCGGTGAAAATGACCGTGGCGTTACCCGCCGATCTTCATCGTGAT
CTGCTTGCCTACGCAGCACT

Product: type IV secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTGQAPTVGENPAPASSPPPDLRLRADRPRVVRLSRTVVWSLGGVGMVAVAFALGYALQASHRSPSTAATQDTDVRPSAD
GLAGLPADYIGNTVPKLGPALPGDLGRAILHAQGQGKAVSGTEDHRAAQEIEAAIASRLFVQTGERDRASEQATPPAPGA
PASQGRASTTTGPQAGNIAFLEGQPDRATTSPDRIAPPASPYVLQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTG
RYLLIPQGSLLFGAYNSGVSFGQQRTQIIWTRLIYPDGESLVLEKLPGGDAIGQSGLSDEVDNHWGQLFKAALVTTLLSV
GSEAGTSQSENNLAQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVILSRDLLLKPYQNGGNLR

Sequences:

>Translated_391_residues
MTGQAPTVGENPAPASSPPPDLRLRADRPRVVRLSRTVVWSLGGVGMVAVAFALGYALQASHRSPSTAATQDTDVRPSAD
GLAGLPADYIGNTVPKLGPALPGDLGRAILHAQGQGKAVSGTEDHRAAQEIEAAIASRLFVQTGERDRASEQATPPAPGA
PASQGRASTTTGPQAGNIAFLEGQPDRATTSPDRIAPPASPYVLQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTG
RYLLIPQGSLLFGAYNSGVSFGQQRTQIIWTRLIYPDGESLVLEKLPGGDAIGQSGLSDEVDNHWGQLFKAALVTTLLSV
GSEAGTSQSENNLAQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVILSRDLLLKPYQNGGNLR
>Mature_390_residues
TGQAPTVGENPAPASSPPPDLRLRADRPRVVRLSRTVVWSLGGVGMVAVAFALGYALQASHRSPSTAATQDTDVRPSADG
LAGLPADYIGNTVPKLGPALPGDLGRAILHAQGQGKAVSGTEDHRAAQEIEAAIASRLFVQTGERDRASEQATPPAPGAP
ASQGRASTTTGPQAGNIAFLEGQPDRATTSPDRIAPPASPYVLQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTGR
YLLIPQGSLLFGAYNSGVSFGQQRTQIIWTRLIYPDGESLVLEKLPGGDAIGQSGLSDEVDNHWGQLFKAALVTTLLSVG
SEAGTSQSENNLAQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVILSRDLLLKPYQNGGNLR

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 40685; Mature: 40554

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQAPTVGENPAPASSPPPDLRLRADRPRVVRLSRTVVWSLGGVGMVAVAFALGYALQA
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHEEECCCCHHHHHHHHHHHHHHHH
SHRSPSTAATQDTDVRPSADGLAGLPADYIGNTVPKLGPALPGDLGRAILHAQGQGKAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCC
GTEDHRAAQEIEAAIASRLFVQTGERDRASEQATPPAPGAPASQGRASTTTGPQAGNIAF
CCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
LEGQPDRATTSPDRIAPPASPYVLQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTG
EECCCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
RYLLIPQGSLLFGAYNSGVSFGQQRTQIIWTRLIYPDGESLVLEKLPGGDAIGQSGLSDE
CEEEEECCCEEEEECCCCCHHHHHHHEEEEEEEECCCCCCEEEEECCCCCHHCCCCCCHH
VDNHWGQLFKAALVTTLLSVGSEAGTSQSENNLAQAIRSGASNGFSMVGNRLIDRSLNVQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
PTLTDRPGLPFTVILSRDLLLKPYQNGGNLR
CCCCCCCCCCEEEEECCCHHCCCCCCCCCCC
>Mature Secondary Structure 
TGQAPTVGENPAPASSPPPDLRLRADRPRVVRLSRTVVWSLGGVGMVAVAFALGYALQA
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHEEECCCCHHHHHHHHHHHHHHHH
SHRSPSTAATQDTDVRPSADGLAGLPADYIGNTVPKLGPALPGDLGRAILHAQGQGKAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCC
GTEDHRAAQEIEAAIASRLFVQTGERDRASEQATPPAPGAPASQGRASTTTGPQAGNIAF
CCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
LEGQPDRATTSPDRIAPPASPYVLQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTG
EECCCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
RYLLIPQGSLLFGAYNSGVSFGQQRTQIIWTRLIYPDGESLVLEKLPGGDAIGQSGLSDE
CEEEEECCCEEEEECCCCCHHHHHHHEEEEEEEECCCCCCEEEEECCCCCHHCCCCCCHH
VDNHWGQLFKAALVTTLLSVGSEAGTSQSENNLAQAIRSGASNGFSMVGNRLIDRSLNVQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
PTLTDRPGLPFTVILSRDLLLKPYQNGGNLR
CCCCCCCCCCEEEEECCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]